RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 Q86TA4 180 aa9.46□□□□□ -0.89
NUP54-202ENST00000502850 TXN2Q99757 166 aa9.46□□□□□ -0.89
NUP54-202ENST00000502850 LPAR2Q9HBW0 351 aa9.46□□□□□ -0.89
NUP54-202ENST00000502850 NAGKQ9UJ70 344 aa9.46□□□□□ -0.89
NUP54-202ENST00000502850 RPH3ALQ9UNE2 315 aa9.46□□□□□ -0.89
NUP54-202ENST00000502850 TRBV19A0A075B6N1 114 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 WI2-2373I1.2A0A1W2PRP0 233 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 NCBP2LA6PVI3 153 aaKnown RBP9.45□□□□□ -0.9
NUP54-202ENST00000502850 HLA-DRB1P01911 266 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 IL4P05112 153 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 FCGR2BP31994 310 aaPredicted RBP9.45□□□□□ -0.9
NUP54-202ENST00000502850 REC114Q7Z4M0 266 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 ARL6IP6Q8N6S5 226 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 SIGLECL1Q8N7X8 197 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 ZNF491Q8N8L2 437 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 TMEM75Q8N9X5 138 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 NUP35Q8NFH5 326 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 ITLN2Q8WWU7 325 aaPredicted RBP9.45□□□□□ -0.9
NUP54-202ENST00000502850 KCNS1Q96KK3 526 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 GSX1Q9H4S2 264 aaPredicted RBP9.45□□□□□ -0.9
NUP54-202ENST00000502850 ZNF586Q9NXT0 402 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 C21orf62Q9NYP8 219 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 TP53TG3Q9ULZ0 132 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 FBLL1A6NHQ2 334 aaKnown RBP9.45□□□□□ -0.9
NUP54-202ENST00000502850 SPINK4O60575 86 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 TOX4O94842 621 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 IGLC2P0DOY2 106 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 CDKN1AP38936 164 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 LBHQ53QV2 105 aaPredicted RBP9.45□□□□□ -0.9
NUP54-202ENST00000502850 Q56UQ5 140 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 NEU1Q99519 415 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 PRSS22Q9GZN4 317 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 GNB4Q9HAV0 340 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 ZFP30Q9Y2G7 519 aa9.45□□□□□ -0.9
NUP54-202ENST00000502850 UNC79Q9P2D8 2635 aa9.44□□□□□ -0.9
NUP54-202ENST00000502850 C19orf71A6NCJ1 209 aa9.44□□□□□ -0.9
NUP54-202ENST00000502850 HIGD1CA8MV81 97 aa9.44□□□□□ -0.9
NUP54-202ENST00000502850 BMPR1BO00238 502 aa9.44□□□□□ -0.9
NUP54-202ENST00000502850 ZNF253O75346 499 aa9.44□□□□□ -0.9
NUP54-202ENST00000502850 OR2J3O76001 311 aa9.44□□□□□ -0.9
NUP54-202ENST00000502850 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
NUP54-202ENST00000502850 SRIP30626 198 aa9.44□□□□□ -0.9
NUP54-202ENST00000502850 SLC35B1P78383 322 aa9.44□□□□□ -0.9
NUP54-202ENST00000502850 LEMD1Q68G75 181 aa9.44□□□□□ -0.9
NUP54-202ENST00000502850 FANCD2OSQ96PS1 177 aa9.44□□□□□ -0.9
NUP54-202ENST00000502850 FAM103A1Q9BTL3 118 aaKnown RBP9.44□□□□□ -0.9
NUP54-202ENST00000502850 AAMDCQ9H7C9 122 aa9.44□□□□□ -0.9
NUP54-202ENST00000502850 NOTCH2Q04721 2471 aa9.44□□□□□ -0.9
NUP54-202ENST00000502850 ADGRG4Q8IZF6 3080 aa9.43□□□□□ -0.9
NUP54-202ENST00000502850 A0A1B0GUS0 222 aa9.43□□□□□ -0.9
NUP54-202ENST00000502850 ZFP36P26651 326 aaKnown RBP9.43□□□□□ -0.9
NUP54-202ENST00000502850 HBBP68871 147 aa9.43□□□□□ -0.9
NUP54-202ENST00000502850 PSG9Q00887 426 aa9.43□□□□□ -0.9
NUP54-202ENST00000502850 LURAP1LQ8IV03 231 aa9.43□□□□□ -0.9
NUP54-202ENST00000502850 VN1R17PQ8TDU5 208 aa9.43□□□□□ -0.9
NUP54-202ENST00000502850 PRO1933Q9H354 126 aa9.43□□□□□ -0.9
NUP54-202ENST00000502850 CRYBG3Q68DQ2 2970 aa9.43□□□□□ -0.9
NUP54-202ENST00000502850 ABCA4P78363 2273 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 A0A1B0GXF2 115 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 A0A1W2PRD5 423 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 A0A1W2PRF3 423 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 A0A1W2PRM7 423 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 A8MWP6 167 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 NPIPB6E9PJ23 425 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 NUPR1O60356 82 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 RPL7P18124 248 aaKnown RBP9.42□□□□□ -0.9
NUP54-202ENST00000502850 CSN1S1P47710 185 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 RAB9AP51151 201 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 LINC00310P59036 64 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 KLF5Q13887 457 aaPredicted RBP9.42□□□□□ -0.9
NUP54-202ENST00000502850 KLK9Q2XQG4 91 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 ASPHD1Q5U4P2 390 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 CYB5R2Q6BCY4 276 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
NUP54-202ENST00000502850 GOLT1AQ6ZVE7 132 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 ZNF664Q8N3J9 261 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 FAM110DQ8TAY7 271 aaPredicted RBP9.42□□□□□ -0.9
NUP54-202ENST00000502850 FAM168AQ92567 244 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 HSPB9Q9BQS6 159 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 KLK9Q9UKQ9 250 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 ITPR2Q14571 2701 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 TEX15Q9BXT5 2789 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 CELSR2Q9HCU4 2923 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 A0A1W2PPR1 153 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 ZNF705FA8MVS1 300 aaPredicted RBP9.42□□□□□ -0.9
NUP54-202ENST00000502850 GPX1P07203 203 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 SNRPCP09234 159 aaKnown RBP9.42□□□□□ -0.9
NUP54-202ENST00000502850 ZNF705DP0CH99 300 aaPredicted RBP9.42□□□□□ -0.9
NUP54-202ENST00000502850 ZNF705BP0CI00 300 aaPredicted RBP9.42□□□□□ -0.9
NUP54-202ENST00000502850 CD24P25063 80 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 AMTP48728 403 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 C1orf194Q5T5A4 169 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 Q6AWC8 147 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 SIGLEC15Q6ZMC9 328 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 NDUFAF3Q9BU61 184 aa9.42□□□□□ -0.9
NUP54-202ENST00000502850 CENPEQ02224 2701 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 IGHV7-81A0A0B4J1V7 117 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 KIR2DL5BA0A0G2JN68 375 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 KIR2DL5BA0A0G2JPC4 375 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 A0A1B0GW15 77 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms