RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 Q9H3A6 140 aa10.2□□□□□ -0.78
TRAF4-212ENST00000498540 AKAIN1P0CW23 69 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 PRB4P10163 310 aaPredicted RBP10.19□□□□□ -0.78
TRAF4-212ENST00000498540 IAPPP10997 89 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 HTN1P15515 57 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 GATA2P23769 480 aaPredicted RBP10.19□□□□□ -0.78
TRAF4-212ENST00000498540 DLK1P80370 383 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 FGL1Q08830 312 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 TTC32Q5I0X7 151 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 TMEM182Q6ZP80 229 aaPredicted RBP10.19□□□□□ -0.78
TRAF4-212ENST00000498540 ZNF738Q8NE65 137 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 OR4D5Q8NGN0 318 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 OR1B1Q8NGR6 318 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 OR1S1Q8NH92 325 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 SMIM4Q8WVI0 70 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 PAIP2BQ9ULR5 123 aaKnown RBP10.19□□□□□ -0.78
TRAF4-212ENST00000498540 SLC45A2Q9UMX9 530 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 KCNIP3Q9Y2W7 256 aa10.19□□□□□ -0.78
TRAF4-212ENST00000498540 EPM2AB3EWF7 344 aa10.18□□□□□ -0.78
TRAF4-212ENST00000498540 ORM2P19652 201 aa10.18□□□□□ -0.78
TRAF4-212ENST00000498540 BTF3P20290 206 aaKnown RBP10.18□□□□□ -0.78
TRAF4-212ENST00000498540 TAS2R60P59551 318 aa10.18□□□□□ -0.78
TRAF4-212ENST00000498540 HIST1H1AQ02539 215 aaPredicted RBP10.18□□□□□ -0.78
TRAF4-212ENST00000498540 CTF1Q16619 201 aa10.18□□□□□ -0.78
TRAF4-212ENST00000498540 GGNBP1Q5YKI7 109 aa10.18□□□□□ -0.78
TRAF4-212ENST00000498540 CLVS1Q8IUQ0 354 aaPredicted RBP10.18□□□□□ -0.78
TRAF4-212ENST00000498540 TMEM256Q8N2U0 113 aa10.18□□□□□ -0.78
TRAF4-212ENST00000498540 C16orf74Q96GX8 76 aa10.18□□□□□ -0.78
TRAF4-212ENST00000498540 PRRT1Q99946 306 aa10.18□□□□□ -0.78
TRAF4-212ENST00000498540 NOP10Q9NPE3 64 aaKnown RBP10.18□□□□□ -0.78
TRAF4-212ENST00000498540 TIMM8BQ9Y5J9 83 aaPredicted RBP10.18□□□□□ -0.78
TRAF4-212ENST00000498540 TRAV26-1A0A087WT03 109 aa10.17□□□□□ -0.78
TRAF4-212ENST00000498540 PRSS46E5RG02 174 aa10.17□□□□□ -0.78
TRAF4-212ENST00000498540 PITX3O75364 302 aa10.17□□□□□ -0.78
TRAF4-212ENST00000498540 CFDP00746 253 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-212ENST00000498540 AKR1C4P17516 323 aa10.17□□□□□ -0.78
TRAF4-212ENST00000498540 RAB11AP62491 216 aa10.17□□□□□ -0.78
TRAF4-212ENST00000498540 MRPS10P82664 201 aaKnown RBP10.17□□□□□ -0.78
TRAF4-212ENST00000498540 OR5I1Q13606 314 aa10.17□□□□□ -0.78
TRAF4-212ENST00000498540 RNASE8Q8TDE3 154 aaKnown RBP10.17□□□□□ -0.78
TRAF4-212ENST00000498540 GNPNAT1Q96EK6 184 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-212ENST00000498540 GPR82Q96P67 336 aa10.17□□□□□ -0.78
TRAF4-212ENST00000498540 TMEM147Q9BVK8 224 aa10.17□□□□□ -0.78
TRAF4-212ENST00000498540 A0A0J9YY99 117 aa10.16□□□□□ -0.78
TRAF4-212ENST00000498540 H3BRN7 92 aa10.16□□□□□ -0.78
TRAF4-212ENST00000498540 RHOBP62745 196 aa10.16□□□□□ -0.78
TRAF4-212ENST00000498540 ESRGQ1W209 222 aa10.16□□□□□ -0.78
TRAF4-212ENST00000498540 TMEM144Q7Z5S9 345 aa10.16□□□□□ -0.78
TRAF4-212ENST00000498540 BPIFCQ8NFQ6 507 aa10.16□□□□□ -0.78
TRAF4-212ENST00000498540 OR8A1Q8NGG7 326 aa10.16□□□□□ -0.78
TRAF4-212ENST00000498540 RXFP4Q8TDU9 374 aa10.16□□□□□ -0.78
TRAF4-212ENST00000498540 UPK3BQ9BT76 320 aa10.16□□□□□ -0.78
TRAF4-212ENST00000498540 ZNF586Q9NXT0 402 aa10.16□□□□□ -0.78
TRAF4-212ENST00000498540 A0A1W2PPQ1 181 aa10.15□□□□□ -0.78
TRAF4-212ENST00000498540 ZNF701M0R085 212 aaPredicted RBP10.15□□□□□ -0.78
TRAF4-212ENST00000498540 CTDSP2O14595 271 aa10.15□□□□□ -0.78
TRAF4-212ENST00000498540 RGS5O15539 181 aa10.15□□□□□ -0.78
TRAF4-212ENST00000498540 M6PRP20645 277 aa10.15□□□□□ -0.78
TRAF4-212ENST00000498540 HOXA5P20719 270 aa10.15□□□□□ -0.78
TRAF4-212ENST00000498540 FUSP35637 526 aaKnown RBP eCLIP10.15□□□□□ -0.78
TRAF4-212ENST00000498540 TMEM263Q8WUH6 116 aaKnown RBP10.15□□□□□ -0.78
TRAF4-212ENST00000498540 ANKRD20A5PA0PJZ0 165 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 INAFM2P0DMQ5 153 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 CXCL3P19876 107 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 LINC00315P59091 139 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 SRPXP78539 464 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 AKR1C1Q04828 323 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 ZNF493Q6ZR52 646 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 LINC00612Q8N6U2 182 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 OR10J6PQ8NGY7 276 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 ZNF503Q96F45 646 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 SHANK2-AS3Q9BTD1 123 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 PPP1R14DQ9NXH3 145 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 SCP2D1Q9UJQ7 156 aa10.14□□□□□ -0.79
TRAF4-212ENST00000498540 MRPS16Q9Y3D3 137 aaKnown RBP10.14□□□□□ -0.79
TRAF4-212ENST00000498540 ANXA3P12429 323 aa10.13□□□□□ -0.79
TRAF4-212ENST00000498540 CDKN1BP46527 198 aa10.13□□□□□ -0.79
TRAF4-212ENST00000498540 KIR3DS1Q14943 382 aa10.13□□□□□ -0.79
TRAF4-212ENST00000498540 Q6ZRN7 208 aaPredicted RBP10.13□□□□□ -0.79
TRAF4-212ENST00000498540 ACOT7LQ6ZUV0 252 aa10.13□□□□□ -0.79
TRAF4-212ENST00000498540 SCGB3A2Q96PL1 93 aa10.13□□□□□ -0.79
TRAF4-212ENST00000498540 WRBO00258 174 aa10.12□□□□□ -0.79
TRAF4-212ENST00000498540 CTDSPLO15194 276 aa10.12□□□□□ -0.79
TRAF4-212ENST00000498540 RPL7P18124 248 aaKnown RBP10.12□□□□□ -0.79
TRAF4-212ENST00000498540 S100A7P31151 101 aa10.12□□□□□ -0.79
TRAF4-212ENST00000498540 XGP55808 180 aa10.12□□□□□ -0.79
TRAF4-212ENST00000498540 IL18Q14116 193 aa10.12□□□□□ -0.79
TRAF4-212ENST00000498540 PSG3Q16557 428 aa10.12□□□□□ -0.79
TRAF4-212ENST00000498540 LYPD1Q8N2G4 141 aa10.12□□□□□ -0.79
TRAF4-212ENST00000498540 MCUBQ9NWR8 336 aa10.12□□□□□ -0.79
TRAF4-212ENST00000498540 HIGD1AQ9Y241 93 aa10.12□□□□□ -0.79
TRAF4-212ENST00000498540 A0A087X0K7 114 aa10.11□□□□□ -0.79
TRAF4-212ENST00000498540 DUXBA0A1W2PPF3 345 aa10.11□□□□□ -0.79
TRAF4-212ENST00000498540 GAGE12BA1L429 117 aa10.11□□□□□ -0.79
TRAF4-212ENST00000498540 H3BP45 60 aa10.11□□□□□ -0.79
TRAF4-212ENST00000498540 H7BYZ3 331 aa10.11□□□□□ -0.79
TRAF4-212ENST00000498540 MED6O75586 246 aa10.11□□□□□ -0.79
TRAF4-212ENST00000498540 GAGE7O76087 117 aa10.11□□□□□ -0.79
TRAF4-212ENST00000498540 GAGE12FP0CL80 117 aa10.11□□□□□ -0.79
TRAF4-212ENST00000498540 GAGE12GP0CL81 117 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms