RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	SLC45A2	Q9UMX9	530 aa		4.15	□□□□□ -1.75
HMGXB4-208	ENST00000498325		A0A087WWC5	75 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	IGHV7-81	A0A0B4J1V7	117 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325		A0A1B0GV50	99 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TCRBV4S1A1T	A0A5B7	111 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TMEM89	A2RUT3	159 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325		A6NDX4	124 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	RBFOX3	A6NFN3	312 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	LINC01548	A6NM66	108 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SEC14L6	B5MCN3	397 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325		H3BUX3	64 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	YIF1A	O95070	293 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	LINC00869	P0C866	280 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	APELA	P0DMC3	54 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	S100A2	P29034	98 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	CDX1	P47902	265 aa	Predicted RBP	4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PSMB3	P49720	205 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	RND2	P52198	227 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	MFAP4	P55083	255 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	RAB4B	P61018	213 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	AKIRIN2	Q53H80	203 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	KHDC3L	Q587J8	217 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	C9orf152	Q5JTZ5	239 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SPSB3	Q6PJ21	355 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	UNQ5815/PRO19632	Q6UWF5	114 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	C9orf139	Q6ZV77	190 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SLC35E3	Q7Z769	313 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	S100A7A	Q86SG5	101 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ZFP82	Q8N141	532 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	C5orf56	Q8N8D9	126 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TMEM116	Q8NCL8	245 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	OR5R1	Q8NH85	324 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PIFO	Q8TCI5	191 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	GATAD1	Q8WUU5	269 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	RAB24	Q969Q5	203 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PFDN5	Q99471	154 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TRGV9	Q99603	122 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TXN2	Q99757	166 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	FAM103A1	Q9BTL3	118 aa	Known RBP	4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SLC35B3	Q9H1N7	401 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TNFRSF19	Q9NS68	423 aa		4.14	□□□□□ -1.75
HMGXB4-208	ENST00000498325	IGLV11-55	A0A075B6I3	123 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	IGKV1OR2-108	A0A075B7D4	117 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325		B4DEV8	164 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325		I3L2K1	104 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325		M0R036	132 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	COX7A2P2	O60397	106 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	NDUFS6	O75380	124 aa	Known RBP	4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	CLN5	O75503	358 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	CXorf1	O96002	111 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	HSPB1	P04792	205 aa	Known RBP	4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	STAG3L2	P0CL84	134 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	STAG3L3	P0CL85	134 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	S100A7	P31151	101 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	MFAP2	P55001	183 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	FGF8	P55075	233 aa	Predicted RBP	4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TAS2R45	P59539	299 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	CCL20	P78556	96 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ZNF726P1	Q15940	193 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	LY6E	Q16553	131 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	HAGH	Q16775	308 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	DEFB112	Q30KQ8	113 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	AWAT1	Q58HT5	328 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ZNF506	Q5JVG8	444 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	FAM78B	Q5VT40	261 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	MORN5	Q5VZ52	161 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TMEM219	Q86XT9	240 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	OR5T1	Q8NG75	326 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	OR4X1	Q8NH49	305 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TXNDC17	Q9BRA2	123 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	MRPL32	Q9BYC8	188 aa	Known RBP	4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TMEM231	Q9H6L2	316 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SLC25A22	Q9H936	323 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	DNAJC4	Q9NNZ3	241 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	MANBAL	Q9NQG1	85 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ZNF355P	Q9NSJ1	428 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	GAR1	Q9NY12	217 aa	Known RBP	4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TECR	Q9NZ01	308 aa	Known RBP	4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	GNG13	Q9P2W3	67 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	VAX2	Q9UIW0	290 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	FUT9	Q9Y231	359 aa		4.13	□□□□□ -1.75
HMGXB4-208	ENST00000498325	IGKV1D-37	A0A075B6S9	117 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	IGHV3-21	A0A0B4J1V1	117 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TRAV41	A0A0B4J266	112 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	LOC102723971	A0A1B0GUV8	181 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325		K7EIM0	57 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ATP6V0E1	O15342	81 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	GNG7	O60262	68 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	OR2C1	O95371	312 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	IGHV3-48	P01763	117 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	IGHG2	P01859	326 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	C8orf88	P0DMB2	117 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	BCL2	P10415	239 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	HNF1A	P20823	631 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	MAL	P21145	153 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	GATA2	P23769	480 aa	Predicted RBP	4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	FCGR2B	P31994	310 aa	Predicted RBP	4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	IER3	P46695	156 aa		4.12	□□□□□ -1.75

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