RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 IGHV3OR16-13A0A075B7E8 117 aa12.32□□□□□ -0.44
C4A-259ENST00000498271 IGHV3-74A0A0B4J1X5 117 aa12.32□□□□□ -0.44
C4A-259ENST00000498271 COX8AP10176 69 aa12.32□□□□□ -0.44
C4A-259ENST00000498271 NCOR1O75376 2440 aa12.32□□□□□ -0.44
C4A-259ENST00000498271 COA6Q5JTJ3 125 aaKnown RBP12.31□□□□□ -0.44
C4A-259ENST00000498271 FOXL2NBQ6ZUU3 175 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 DMRTA2Q96SC8 542 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 PLXND1Q9Y4D7 1925 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 SLC25A20O43772 301 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 TMEM133Q9H2Q1 129 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 TSSC4Q9Y5U2 329 aaPredicted RBP12.31□□□□□ -0.44
C4A-259ENST00000498271 KIR2DL5BA0A0G2JN68 375 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 KIR2DL5BA0A0G2JPC4 375 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 IGHV3-23P01764 117 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 CD28P10747 220 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 ZNF329Q86UD4 541 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 KIR2DL5AQ8N109 375 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 BSPH1Q075Z2 132 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 RPUSD1Q9UJJ7 312 aaKnown RBP12.31□□□□□ -0.44
C4A-259ENST00000498271 FAM231DQ6ZW35 169 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 TMEM167AQ8TBQ9 72 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 ZNF581Q9P0T4 197 aa12.31□□□□□ -0.44
C4A-259ENST00000498271 CNOT1A5YKK6 2376 aaKnown RBP12.3□□□□□ -0.44
C4A-259ENST00000498271 SIVA1O15304 175 aa12.3□□□□□ -0.44
C4A-259ENST00000498271 IGHV3OR16-12A0A075B7B8 117 aa12.3□□□□□ -0.44
C4A-259ENST00000498271 IGHV1-18A0A0C4DH31 117 aa12.3□□□□□ -0.44
C4A-259ENST00000498271 DUSP14O95147 198 aaKnown RBP12.3□□□□□ -0.44
C4A-259ENST00000498271 RNF5Q99942 180 aa12.3□□□□□ -0.44
C4A-259ENST00000498271 CACNA1DQ01668 2161 aa12.3□□□□□ -0.44
C4A-259ENST00000498271 IGHV3-66A0A0C4DH42 116 aa12.3□□□□□ -0.44
C4A-259ENST00000498271 ETV2O00321 342 aaPredicted RBP12.3□□□□□ -0.44
C4A-259ENST00000498271 CLEC19AQ6UXS0 136 aa12.3□□□□□ -0.44
C4A-259ENST00000498271 NPIPB5A8MRT5 1133 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 NCR2O95944 276 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 TAL2Q16559 108 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 C7orf69Q9H7B7 122 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 S4R3C0 116 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 IGHV1-24A0A0C4DH33 117 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 C17orf100A8MU93 164 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 CD7P09564 240 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 TMEM158Q8WZ71 300 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 FANCMQ8IYD8 2048 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 IGKV3OR2-268A0A0C4DH90 116 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 A0A0G2JRQ6 117 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 DUX3Q96PT4 197 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 TRGV11A0A075B6L2 103 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 CMC4P56277 68 aaPredicted RBP12.29□□□□□ -0.44
C4A-259ENST00000498271 SLAQ13239 276 aa12.29□□□□□ -0.44
C4A-259ENST00000498271 GAGE12HA6NDE8 117 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 LGALS9BQ3B8N2 356 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 LGALS9CQ6DKI2 356 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 PRSS22Q9GZN4 317 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 HEATR5AQ86XA9 2040 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 SRRM5B3KS81 715 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 SH2D1AO60880 128 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 IGLL1P15814 213 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 SLC25A16P16260 332 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 DPH3P1Q9H4G8 78 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 EP400Q96L91 3159 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 Q86TA4 180 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 CACNA1BQ00975 2339 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 A0A1W2PPM0 123 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 PMS2P5A8MQ11 134 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 Q6ZRM9 215 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 NEGR1Q7Z3B1 354 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 C5orf24Q7Z6I8 188 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 C3orf56Q8N813 242 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 TOMM7Q9P0U1 55 aa12.28□□□□□ -0.44
C4A-259ENST00000498271 PHF3Q92576 2039 aaKnown RBP12.28□□□□□ -0.44
C4A-259ENST00000498271 IGHV3-49A0A0A0MS15 119 aa12.27□□□□□ -0.44
C4A-259ENST00000498271 VCYO14598 125 aa12.27□□□□□ -0.44
C4A-259ENST00000498271 CFAP161Q6P656 301 aa12.27□□□□□ -0.44
C4A-259ENST00000498271 C9orf153Q5TBE3 101 aa12.27□□□□□ -0.45
C4A-259ENST00000498271 Q6P435 159 aa12.27□□□□□ -0.45
C4A-259ENST00000498271 DOCK9Q9BZ29 2069 aa12.27□□□□□ -0.45
C4A-259ENST00000498271 STPG4Q8N801 248 aa12.27□□□□□ -0.45
C4A-259ENST00000498271 EDA2RQ9HAV5 297 aa12.27□□□□□ -0.45
C4A-259ENST00000498271 MBNL3Q9NUK0 354 aaKnown RBP12.27□□□□□ -0.45
C4A-259ENST00000498271 SMIM27A0A1W2PRY6 76 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 IGKV3-20P01619 116 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 CCL3L1P16619 93 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 BVES-AS1Q5T3Y7 98 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 BOD1L2Q8IYS8 172 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 EXOC3-AS1Q8N2X6 119 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 A0A1B0GUS0 222 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 C9JAW5 83 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 PPIFP30405 207 aaKnown RBP12.26□□□□□ -0.45
C4A-259ENST00000498271 TMEM86BQ8N661 226 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 PSPNO60542 156 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 V9GYV3 84 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 MYOD1P15172 320 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 MDS2Q8NDY4 140 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 PEMTQ9UBM1 199 aa12.26□□□□□ -0.45
C4A-259ENST00000498271 PAX9P55771 341 aa12.25□□□□□ -0.45
C4A-259ENST00000498271 PDE6HQ13956 83 aa12.25□□□□□ -0.45
C4A-259ENST00000498271 SCRT1Q9BWW7 348 aa12.25□□□□□ -0.45
C4A-259ENST00000498271 SRCAPQ6ZRS2 3230 aa12.25□□□□□ -0.45
C4A-259ENST00000498271 ZNF138P52744 262 aa12.25□□□□□ -0.45
C4A-259ENST00000498271 RIF1Q5UIP0 2472 aaKnown RBP12.25□□□□□ -0.45
C4A-259ENST00000498271 INTS1Q8N201 2190 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms