RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 RANP62826 216 aaKnown RBP6.54□□□□□ -1.36
SF3A1-210ENST00000498259 USF2Q15853 346 aaPredicted RBP6.54□□□□□ -1.36
SF3A1-210ENST00000498259 ZNF674Q2M3X9 581 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 RPEL1Q2QD12 228 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 Q6ZS46 218 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 C5orf17Q8NAS9 161 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 CLRN3Q8NCR9 226 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 BLNKQ8WV28 456 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 C11orf52Q96A22 123 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 SLC50A1Q9BRV3 221 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 KLK15Q9H2R5 256 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 DAZ1Q9NQZ3 744 aaKnown RBP6.54□□□□□ -1.36
SF3A1-210ENST00000498259 OTORQ9NRC9 128 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 LY96Q9Y6Y9 160 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 FASNP49327 2511 aaKnown RBP6.54□□□□□ -1.36
SF3A1-210ENST00000498259 CSMD2Q7Z408 3487 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 CSPG4Q6UVK1 2322 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 TRBV19A0A075B6N1 114 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 PGPA6NDG6 321 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 CXorf65A6NEN9 183 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 ZNF785A8K8V0 405 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 C9JQL5 133 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 PPP1R2P9O14990 202 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 BUB3O43684 328 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 NDUFB4O95168 129 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 NDUFA7O95182 113 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 IGHV3-11P01762 117 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 PYYP10082 97 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 UBE2G1P62253 170 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 FAM90A2PQ658T7 463 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 Q6ZSV7 163 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 MYOZ3Q8TDC0 251 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 DPF1Q92782 380 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 SMIM12Q96EX1 92 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 DUX5Q96PT3 197 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 ATG101Q9BSB4 218 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 CTDSP1Q9GZU7 261 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 PARLQ9H300 379 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 ZFAND3Q9H8U3 227 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 SMCO4Q9NRQ5 59 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 SERTAD4Q9NUC0 356 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 TMEM242Q9NWH2 141 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 YTHDF2Q9Y5A9 579 aaKnown RBP6.53□□□□□ -1.36
SF3A1-210ENST00000498259 VPS13CQ709C8 3753 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 CCDC168Q8NDH2 2452 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 ITPR3Q14573 2671 aa6.53□□□□□ -1.36
SF3A1-210ENST00000498259 ITPR2Q14571 2701 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 A0A087WWC5 75 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 A0A087X0K7 114 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 C9JCJ5 164 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 PPP5D1E7EU14 171 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 LGALS9O00182 355 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 EIF3GO75821 320 aaKnown RBP eCLIP6.52□□□□□ -1.37
SF3A1-210ENST00000498259 SLC25A5P05141 298 aaKnown RBP6.52□□□□□ -1.37
SF3A1-210ENST00000498259 RPLP1P05386 114 aaKnown RBP6.52□□□□□ -1.37
SF3A1-210ENST00000498259 IGLC2P0DOY2 106 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 ADCYAP1P18509 176 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 AKR1C3P42330 323 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 ATP5G3P48201 142 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 GNG4P50150 75 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 RPL19P84098 196 aaKnown RBP6.52□□□□□ -1.37
SF3A1-210ENST00000498259 TMEM95Q3KNT9 176 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 MORN5Q5VZ52 161 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 DMRTA1Q5VZB9 504 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 C4orf3Q8WVX3 66 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 ANAPC16Q96DE5 110 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 ZNF503Q96F45 646 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 FMC1Q96HJ9 113 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 BTF3L4Q96K17 158 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 Q9H3A6 140 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 RPS10P5Q9NQ39 176 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 PEMTQ9UBM1 199 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 EPDR1Q9UM22 224 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 TEX15Q9BXT5 2789 aa6.52□□□□□ -1.37
SF3A1-210ENST00000498259 IGHV3-35A0A0C4DH35 117 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 C7orf77A4D0Y5 90 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 PEX7O00628 323 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 CRLF1O75462 422 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 RPL35P42766 123 aaKnown RBP6.51□□□□□ -1.37
SF3A1-210ENST00000498259 KIAA0141Q14154 515 aaPredicted RBP6.51□□□□□ -1.37
SF3A1-210ENST00000498259 GUCA2BQ16661 112 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 AWAT1Q58HT5 328 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 KHDC1LQ5JSQ8 128 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 LEMD1Q68G75 181 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 SIGLEC15Q6ZMC9 328 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 REC114Q7Z4M0 266 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 C1QL4Q86Z23 238 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 C15orf54Q8N8G6 183 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 ZNF414Q96IQ9 312 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 TUBA4BQ9H853 241 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 SDF2L1Q9HCN8 221 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 U3KQE9 123 aa6.51□□□□□ -1.37
SF3A1-210ENST00000498259 HECTD1Q9ULT8 2610 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 IGHV7-4-1A0A0J9YVY3 117 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 SCO2A0A1W2PP80 73 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 GGTLC3B5MD39 225 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 LINC01619G3V211 115 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 S100PP25815 95 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 MYCNOSP40205 109 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 ID1P41134 155 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms