RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 IZUMO1RA6ND01 250 aa8.64□□□□□ -1.03
CTTN-208ENST00000498223 ZNF785A8K8V0 405 aa8.64□□□□□ -1.03
CTTN-208ENST00000498223 H3BRN7 92 aa8.64□□□□□ -1.03
CTTN-208ENST00000498223 BUB3O43684 328 aa8.64□□□□□ -1.03
CTTN-208ENST00000498223 TPT1P13693 172 aaKnown RBP8.64□□□□□ -1.03
CTTN-208ENST00000498223 GALR1P47211 349 aa8.64□□□□□ -1.03
CTTN-208ENST00000498223 AKR1C8PQ5T2L2 129 aa8.64□□□□□ -1.03
CTTN-208ENST00000498223 C1orf194Q5T5A4 169 aa8.64□□□□□ -1.03
CTTN-208ENST00000498223 SAMD5Q5TGI4 173 aa8.64□□□□□ -1.03
CTTN-208ENST00000498223 FAM122CQ6P4D5 195 aa8.64□□□□□ -1.03
CTTN-208ENST00000498223 TMEM61Q8N0U2 210 aa8.64□□□□□ -1.03
CTTN-208ENST00000498223 GLMPQ8WWB7 406 aa8.64□□□□□ -1.03
CTTN-208ENST00000498223 TMEM37Q8WXS4 190 aa8.64□□□□□ -1.03
CTTN-208ENST00000498223 TRAV25A0A0B4J276 109 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 BOLA2-SMG1P6H3BVE0 249 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 MBP02144 154 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 GP9P14770 177 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 ATF4P18848 351 aaPredicted RBP8.63□□□□□ -1.03
CTTN-208ENST00000498223 M6PRP20645 277 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 RAB2AP61019 212 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 RHOBP62745 196 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 SERF2P84101 59 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 SLC51BQ86UW2 128 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 BAP18Q8IXM2 172 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 OR10G4Q8NGN3 311 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 OR10G9Q8NGN4 311 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 OR10G7Q8NGN6 311 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 GPR82Q96P67 336 aa8.63□□□□□ -1.03
CTTN-208ENST00000498223 MRPL32Q9BYC8 188 aaKnown RBP8.63□□□□□ -1.03
CTTN-208ENST00000498223 PRKDCP78527 4128 aaKnown RBP8.62□□□□□ -1.03
CTTN-208ENST00000498223 TRAV5A0A0B4J249 113 aa8.62□□□□□ -1.03
CTTN-208ENST00000498223 RPL7P18124 248 aaKnown RBP8.62□□□□□ -1.03
CTTN-208ENST00000498223 TMEM41BQ5BJD5 291 aa8.62□□□□□ -1.03
CTTN-208ENST00000498223 MORN5Q5VZ52 161 aa8.62□□□□□ -1.03
CTTN-208ENST00000498223 BPIFA4PQ86YQ2 179 aa8.62□□□□□ -1.03
CTTN-208ENST00000498223 LRRC20Q8TCA0 184 aa8.62□□□□□ -1.03
CTTN-208ENST00000498223 ZNF256Q9Y2P7 627 aaPredicted RBP8.62□□□□□ -1.03
CTTN-208ENST00000498223 OR4C46A6NHA9 309 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 TSPAN4O14817 238 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 SPP1P10451 314 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 CDC34P49427 236 aaPredicted RBP8.61□□□□□ -1.03
CTTN-208ENST00000498223 TAS2R45P59539 299 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 SPATA31B1PQ5VZV4 182 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 FAM90A2PQ658T7 463 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 EIF5AL1Q6IS14 154 aaKnown RBP8.61□□□□□ -1.03
CTTN-208ENST00000498223 MIR17HGQ75NE6 70 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 GTSCR1Q86UQ5 136 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 TMED6Q8WW62 240 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 PRR25Q96S07 402 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 SPAG8Q99932 426 aaPredicted RBP8.61□□□□□ -1.03
CTTN-208ENST00000498223 ACTR3CQ9C0K3 210 aaPredicted RBP8.61□□□□□ -1.03
CTTN-208ENST00000498223 MS4A6AQ9H2W1 248 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 SEPSECSQ9HD40 501 aaKnown RBP8.61□□□□□ -1.03
CTTN-208ENST00000498223 FUT9Q9Y231 359 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 BOLA1Q9Y3E2 137 aa8.61□□□□□ -1.03
CTTN-208ENST00000498223 OR7C2O60412 319 aa8.6□□□□□ -1.03
CTTN-208ENST00000498223 SNRPCP09234 159 aaKnown RBP8.6□□□□□ -1.03
CTTN-208ENST00000498223 SEC11BP0C7V7 166 aa8.6□□□□□ -1.03
CTTN-208ENST00000498223 BEAN1Q3B7T3 259 aa8.6□□□□□ -1.03
CTTN-208ENST00000498223 STOML3Q8TAV4 291 aa8.6□□□□□ -1.03
CTTN-208ENST00000498223 NRN1Q9NPD7 142 aa8.6□□□□□ -1.03
CTTN-208ENST00000498223 HMGB3O15347 200 aaKnown RBP8.59□□□□□ -1.03
CTTN-208ENST00000498223 EIF3GO75821 320 aaKnown RBP eCLIP8.59□□□□□ -1.03
CTTN-208ENST00000498223 PRB2P02812 416 aaPredicted RBP8.59□□□□□ -1.03
CTTN-208ENST00000498223 ID1P41134 155 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 MEOX2P50222 304 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 CD81P60033 236 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 KRTAP10-11P60412 298 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 EGFEM1PQ0D2K5 195 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 KHDC3LQ587J8 217 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 IQCF2Q8IXL9 164 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 C16orf92Q96LL3 132 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 PAXXQ9BUH6 204 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 SLC25A2Q9BXI2 301 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 OR51M1Q9H341 326 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 RPRMQ9NS64 109 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 UBQLN2Q9UHD9 624 aa8.59□□□□□ -1.03
CTTN-208ENST00000498223 UMAD1C9J7I0 102 aa8.58□□□□□ -1.04
CTTN-208ENST00000498223 H3BTX0 84 aa8.58□□□□□ -1.04
CTTN-208ENST00000498223 PYYP10082 97 aa8.58□□□□□ -1.04
CTTN-208ENST00000498223 FAM213BQ8TBF2 198 aa8.58□□□□□ -1.04
CTTN-208ENST00000498223 BLNKQ8WV28 456 aa8.58□□□□□ -1.04
CTTN-208ENST00000498223 RAB24Q969Q5 203 aa8.58□□□□□ -1.04
CTTN-208ENST00000498223 SMAD5-AS1Q9Y6J3 95 aa8.58□□□□□ -1.04
CTTN-208ENST00000498223 AGRNO00468 2067 aa8.58□□□□□ -1.04
CTTN-208ENST00000498223 TRAV2A0A0B4J234 112 aa8.57□□□□□ -1.04
CTTN-208ENST00000498223 CTXND1A0A1B0GTU2 59 aa8.57□□□□□ -1.04
CTTN-208ENST00000498223 K7EQG2 157 aa8.57□□□□□ -1.04
CTTN-208ENST00000498223 CD7P09564 240 aa8.57□□□□□ -1.04
CTTN-208ENST00000498223 OR10J4P0C629 311 aa8.57□□□□□ -1.04
CTTN-208ENST00000498223 ZNF688P0C7X2 276 aa8.57□□□□□ -1.04
CTTN-208ENST00000498223 CMC4P56277 68 aaPredicted RBP8.57□□□□□ -1.04
CTTN-208ENST00000498223 SNRPD3P62318 126 aaKnown RBP8.57□□□□□ -1.04
CTTN-208ENST00000498223 UBE2L3P68036 154 aaKnown RBP8.57□□□□□ -1.04
CTTN-208ENST00000498223 KPRPQ5T749 579 aaPredicted RBP8.57□□□□□ -1.04
CTTN-208ENST00000498223 SAMD13Q5VXD3 122 aa8.57□□□□□ -1.04
CTTN-208ENST00000498223 LCN15Q6UWW0 184 aa8.57□□□□□ -1.04
CTTN-208ENST00000498223 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.57□□□□□ -1.04
CTTN-208ENST00000498223 RPP25LQ8N5L8 163 aaKnown RBP8.57□□□□□ -1.04
CTTN-208ENST00000498223 RNF141Q8WVD5 230 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms