RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 RHPN1-AS1Q9BWJ2 59 aa2.76□□□□□ -1.97
USP54-217ENST00000498213 HRASLSQ9HDD0 168 aa2.76□□□□□ -1.97
USP54-217ENST00000498213 TMEM14BQ9NUH8 114 aa2.76□□□□□ -1.97
USP54-217ENST00000498213 RHBDL2Q9NX52 303 aa2.76□□□□□ -1.97
USP54-217ENST00000498213 RNF24Q9Y225 148 aa2.76□□□□□ -1.97
USP54-217ENST00000498213 PUS1Q9Y606 427 aaKnown RBP eCLIP2.76□□□□□ -1.97
USP54-217ENST00000498213 A0A1W2PPQ1 181 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 MEIS3P1A6NDR6 274 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 K7EP13 123 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 DNASE2O00115 360 aaPredicted RBP2.75□□□□□ -1.97
USP54-217ENST00000498213 CTDSPLO15194 276 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 SSX5O60225 188 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 CFDP00746 253 aaPredicted RBP2.75□□□□□ -1.97
USP54-217ENST00000498213 CA1P00915 261 aaPredicted RBP2.75□□□□□ -1.97
USP54-217ENST00000498213 PPYP01298 95 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 IFNA21P01568 189 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 IFNA17P01571 189 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 FCER2P06734 321 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 CTSDP07339 412 aaPredicted RBP2.75□□□□□ -1.97
USP54-217ENST00000498213 SPART-AS1P0CW21 52 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 OR13C7P0DN81 318 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 AREGP15514 252 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 NPPCP23582 126 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 CD300CQ08708 224 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 ASAH1Q13510 395 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 RGS21Q2M5E4 152 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 TMEM69Q5SWH9 247 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 ETFRF1Q6IPR1 90 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 IDO2Q6ZQW0 420 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 SSX9Q7RTT3 188 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 NRARPQ7Z6K4 114 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 FAM219AQ8IW50 185 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 Q8NAQ8 132 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 OR10G8Q8NGN5 311 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 C15orf40Q8WUR7 153 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 SMIM4Q8WVI0 70 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 METTL26Q96S19 204 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 HDHD3Q9BSH5 251 aaPredicted RBP2.75□□□□□ -1.97
USP54-217ENST00000498213 ATG5Q9H1Y0 275 aa2.75□□□□□ -1.97
USP54-217ENST00000498213 FAT3Q8TDW7 4589 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 TRAV18A0A075B6X5 111 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 DEFB131BA0A096LNP1 70 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 TMEM235A6NFC5 223 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 GABARAPH6UMI1 98 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 I3L2K1 104 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 K7EIM0 57 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 LYRM1O43325 122 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 GNG7O60262 68 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 YIF1AO95070 293 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 PTTG1O95997 202 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 IFNA10P01566 189 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 PRH1P02810 166 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 REG1AP05451 166 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 FABP1P07148 127 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 SLC25A4P12235 298 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 TBPP20226 339 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 CRYBB3P26998 211 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 FCGR2CP31995 323 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 MEOX2P50222 304 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 YPEL3P61236 119 aaPredicted RBP2.74□□□□□ -1.97
USP54-217ENST00000498213 HSPE1P61604 102 aaKnown RBP2.74□□□□□ -1.97
USP54-217ENST00000498213 RPL30P62888 115 aaKnown RBP2.74□□□□□ -1.97
USP54-217ENST00000498213 CYCSP99999 105 aaKnown RBP2.74□□□□□ -1.97
USP54-217ENST00000498213 PRCDQ00LT1 54 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 RIGQ13278 110 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 TRIM16LQ309B1 348 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 CDNFQ49AH0 187 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 AARDQ4LEZ3 155 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 PHLDA2Q53GA4 152 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 Q56UQ5 140 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 TTC32Q5I0X7 151 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 C1orf194Q5T5A4 169 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 AADACL3Q5VUY0 350 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 SLC25A24Q6NUK1 477 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 ZNF705AQ6ZN79 300 aaPredicted RBP2.74□□□□□ -1.97
USP54-217ENST00000498213 S100A7AQ86SG5 101 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 BEST4Q8NFU0 473 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 OR4D10Q8NGI6 311 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 OR4X1Q8NH49 305 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 OR52E5Q8NH55 327 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 ZFAND1Q8TCF1 268 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 RNASEH2CQ8TDP1 164 aaKnown RBP2.74□□□□□ -1.97
USP54-217ENST00000498213 GPX8Q8TED1 209 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 CACNG8Q8WXS5 425 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 MOB3AQ96BX8 217 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 C5orf30Q96GV9 206 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 ZNF414Q96IQ9 312 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 FAM210AQ96ND0 272 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 RNF2Q99496 336 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 C20orf24Q9BUV8 137 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 TAS2R8Q9NYW2 309 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 KLK11Q9UBX7 282 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 ANAPC10Q9UM13 185 aa2.74□□□□□ -1.97
USP54-217ENST00000498213 IGKV1D-8A0A087WSZ0 117 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 TEX50A0A1B0GTY4 177 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 A0A1B0GW64 132 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 ANKRD20A5PA0PJZ0 165 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 OR2T8A6NH00 312 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 ZNF705FA8MVS1 300 aaPredicted RBP2.73□□□□□ -1.97
USP54-217ENST00000498213 E7EUB6 86 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms