RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 KDM3AQ9Y4C1 1321 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 MED23Q9ULK4 1368 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 EPPK1P58107 5090 aaKnown RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 CSMD2Q7Z408 3487 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 ATG2AQ2TAZ0 1938 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 USF3Q68DE3 2245 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 TRBV2A0A0J9YWF9 115 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 A0A1B0GWA3 101 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 PSMB11A5LHX3 300 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 A6NDN8 102 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 LYNX1G3V0Z9 82 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 MRPS12O15235 138 aaKnown RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 C2orf68Q2NKX9 166 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 GRTP1Q5TC63 336 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 IL23RQ5VWK5 629 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 HRCT1Q6UXD1 115 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 FP248Q71RG6 208 aaPredicted RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 LINC00305Q7Z4B0 112 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 LKAAEAR1Q8TD35 194 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 DSCR8Q96T75 97 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 PARD6GQ9BYG4 376 aaPredicted RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 FBXO44Q9H4M3 255 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 QPCTLQ9NXS2 382 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 USE1Q9NZ43 259 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 GNG12Q9UBI6 72 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 WDR81Q562E7 1941 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 TRBV6-5A0A0K0K1A5 114 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 H0Y3Z8 333 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 PRR27Q6MZM9 219 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 LINC01561Q8N1V8 128 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 Q8N6K4 173 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 C12orf76Q8N812 135 aaPredicted RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 MVB12AQ96EY5 273 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 C1orf159Q96HA4 380 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 HIST1H4GQ99525 98 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 LLPHQ9BRT6 129 aaKnown RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 NMES1Q9C002 83 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 Q9H3A6 140 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 ZNFX1Q9P2E3 1918 aaKnown RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 GNG8Q9UK08 70 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 SIGLEC9Q9Y336 463 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 HSPE1-MOB4S4R3N1 261 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 LAMA3Q16787 3333 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 GOLGB1Q14789 3259 aaKnown RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 CRYBG3Q68DQ2 2970 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 CLUHO75153 1309 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 TRAV1-2A0A0B4J238 106 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 A0A0U1RRA0 63 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 NDUFAB1O14561 156 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 NDUFS4O43181 175 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 CXCL1P09341 107 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 HIST1H1DP16402 221 aaKnown RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 NSG1P42857 185 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 CLDN20P56880 219 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 ADAMTSL5Q6ZMM2 481 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 Q6ZQY7 126 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 PIFOQ8TCI5 191 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 KRTAP9-3Q9BYQ3 159 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 MAP1LC3BQ9GZQ8 125 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 CRIPTQ9P021 101 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 MGAQ8IWI9 3026 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 SCN1AP35498 2009 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 IGHV3OR15-7A0A075B7D8 119 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 IGHV2-26A0A0B4J1V2 119 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 TLCD2A6NGC4 264 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 CCL21O00585 134 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 CLDN3O15551 220 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 NDUFB3O43676 98 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 LYPD3O95274 346 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 IGHG4P01861 327 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 RBP4P02753 201 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 HOXB5P09067 269 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 FGF6P10767 208 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 UQCRBP14927 111 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 GPX2P18283 190 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 RPL38P63173 70 aaKnown RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 ZNF818PQ6ZRF7 136 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 C6orf201Q7Z4U5 140 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 NRSN1Q8IZ57 195 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 DEFB107AQ8IZN7 70 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 C6orf223Q8N319 242 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 ZNF321PQ8N8H1 164 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 C9orf106Q8NAJ2 232 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 OR2G3Q8NGZ4 309 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 LYPD6BQ8NI32 183 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 FIBINQ8TAL6 211 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 RPL36Q9Y3U8 105 aaKnown RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 SPEGQ15772 3267 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 DNAH3Q8TD57 4116 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 DYNC2H1Q8NCM8 4307 aaKnown RBP1.03□□□□□ -2.24
XRN1-214ENST00000498077 LINC00862A6NCI5 91 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 A8MUN3 132 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 KRTAP29-1A8MX34 341 aaPredicted RBP1.03□□□□□ -2.24
XRN1-214ENST00000498077 HSBP1L1C9JCN9 74 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.03□□□□□ -2.24
XRN1-214ENST00000498077 PLIN3O60664 434 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 PAEPP09466 180 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 PNMTP11086 282 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 ICAM2P13598 275 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms