RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 NHLH1Q02575 133 aa4.52□□□□□ -1.69
PHC3-217ENST00000497658 RBPJQ06330 500 aa4.52□□□□□ -1.69
PHC3-217ENST00000497658 KIR3DS1Q14943 382 aa4.52□□□□□ -1.69
PHC3-217ENST00000497658 VMA21Q3ZAQ7 101 aa4.52□□□□□ -1.69
PHC3-217ENST00000497658 TIMM23BQ5SRD1 257 aa4.52□□□□□ -1.69
PHC3-217ENST00000497658 TEX36Q5VZQ5 186 aa4.52□□□□□ -1.69
PHC3-217ENST00000497658 BHLHA15Q7RTS1 189 aaPredicted RBP4.52□□□□□ -1.69
PHC3-217ENST00000497658 UBALD2Q8IYN6 164 aa4.52□□□□□ -1.69
PHC3-217ENST00000497658 LINC00311Q8N616 119 aa4.52□□□□□ -1.69
PHC3-217ENST00000497658 SGK494Q96LW2 274 aa4.52□□□□□ -1.69
PHC3-217ENST00000497658 MRPL20Q9BYC9 149 aaKnown RBP4.52□□□□□ -1.69
PHC3-217ENST00000497658 HIGD1AQ9Y241 93 aa4.52□□□□□ -1.69
PHC3-217ENST00000497658 SLC25A15Q9Y619 301 aa4.52□□□□□ -1.69
PHC3-217ENST00000497658 U3KQK5 164 aa4.52□□□□□ -1.69
PHC3-217ENST00000497658 PRUNE2Q8WUY3 3088 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 FRYQ5TBA9 3013 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 FREM2Q5SZK8 3169 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 CGB1A6NKQ9 187 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 J3QR89 54 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 PLAUP00749 431 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 THBDP07204 575 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 RIPPLY3P57055 190 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 PSG3Q16557 428 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 VHLLQ6RSH7 139 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 CIARTQ8N365 385 aaPredicted RBP4.51□□□□□ -1.69
PHC3-217ENST00000497658 MAFAQ8NHW3 353 aaPredicted RBP4.51□□□□□ -1.69
PHC3-217ENST00000497658 RND1Q92730 232 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 HIGD1BQ9P298 99 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 PROCRQ9UNN8 238 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 SPCS1Q9Y6A9 102 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 COL27A1Q8IZC6 1860 aaPredicted RBP4.51□□□□□ -1.69
PHC3-217ENST00000497658 DSCAML1Q8TD84 2053 aa4.51□□□□□ -1.69
PHC3-217ENST00000497658 SERTM2A0A1B0GWG4 89 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 A0A1W2PPI3 338 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 SPRY3O43610 288 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 IGLV2-23P01705 113 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 HBDP02042 147 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 ARMS2P0C7Q2 107 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 SMIM13P0DJ93 91 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 CCL11P51671 97 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 TNFAIP6P98066 277 aaPredicted RBP4.5□□□□□ -1.69
PHC3-217ENST00000497658 S100A7AQ86SG5 101 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 PRNTQ86SH4 94 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 ORMDL3Q8N138 153 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 TMEM105Q8N8V8 129 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 SRSF12Q8WXF0 261 aaKnown RBP4.5□□□□□ -1.69
PHC3-217ENST00000497658 TNFRSF14Q92956 283 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 MCRIP2Q9BUT9 160 aaKnown RBP4.5□□□□□ -1.69
PHC3-217ENST00000497658 CACNA1GO43497 2377 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 DYSFO75923 2080 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 A0A096LNJ9 63 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 FBLL1A6NHQ2 334 aaKnown RBP4.5□□□□□ -1.69
PHC3-217ENST00000497658 K7EM74 188 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 SNAI2O43623 268 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 NCR2O95944 276 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 TNFRSF1AP19438 455 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 IFI27P40305 119 aaPredicted RBP4.5□□□□□ -1.69
PHC3-217ENST00000497658 UQCRFS1P47985 274 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 SRSF1Q07955 248 aaKnown RBP eCLIP4.5□□□□□ -1.69
PHC3-217ENST00000497658 FAM104BQ5XKR9 115 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 GOLT1AQ6ZVE7 132 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 C9orf106Q8NAJ2 232 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 OR8A1Q8NGG7 326 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 ZNF414Q96IQ9 312 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 PRELID3AQ96N28 172 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 JMJD8Q96S16 334 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 CCL13Q99616 98 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 SCNM1Q9BWG6 230 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 SIGLEC8Q9NYZ4 499 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 THYN1Q9P016 225 aa4.5□□□□□ -1.69
PHC3-217ENST00000497658 MRPL36Q9P0J6 103 aaKnown RBP4.5□□□□□ -1.69
PHC3-217ENST00000497658 TANC2Q9HCD6 1990 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 AHCTF1Q8WYP5 2266 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 FRYLO94915 3013 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 VSTM5A8MXK1 200 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 F8W1H4 67 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 LAMTOR5O43504 91 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 HLA-DRB4P13762 266 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 S100A7P31151 101 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 PAX8Q06710 450 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 SPRNQ5BIV9 151 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 FAM201AQ5SY85 155 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 SAMD13Q5VXD3 122 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 LHFPL4Q7Z7J7 247 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 FAM216BQ8N7L0 139 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 IFI27L1Q96BM0 104 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 ZC2HC1AQ96GY0 325 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 SIGMAR1Q99720 223 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 SLC25A39Q9BZJ4 359 aaPredicted RBP4.49□□□□□ -1.69
PHC3-217ENST00000497658 SMPXQ9UHP9 88 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 TIMM8BQ9Y5J9 83 aaPredicted RBP4.49□□□□□ -1.69
PHC3-217ENST00000497658 HLA-DRB4X5D2U9 266 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 DSCAMO60469 2012 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 PCNX2A6NKB5 2137 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 TRBV19A0A075B6N1 114 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 TRAV8-1A0A0A6YYK1 113 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 D6R8Y8 96 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 ZNF207O43670 478 aaKnown RBP4.49□□□□□ -1.69
PHC3-217ENST00000497658 SLC25A17O43808 307 aa4.49□□□□□ -1.69
PHC3-217ENST00000497658 IGHV1-46P01743 117 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms