RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 PATE1Q8WXA2 126 aa1.13□□□□□ -2.23
SMC4-225ENST00000497203 PRRT1Q99946 306 aa1.13□□□□□ -2.23
SMC4-225ENST00000497203 PAIP2Q9BPZ3 127 aaKnown RBP1.13□□□□□ -2.23
SMC4-225ENST00000497203 MYH2Q9UKX2 1941 aa1.13□□□□□ -2.23
SMC4-225ENST00000497203 NUP98P52948 1817 aa1.12□□□□□ -2.23
SMC4-225ENST00000497203 KIAA1549Q9HCM3 1950 aa1.12□□□□□ -2.23
SMC4-225ENST00000497203 CCL16O15467 120 aa1.12□□□□□ -2.23
SMC4-225ENST00000497203 ROMO1P60602 79 aa1.12□□□□□ -2.23
SMC4-225ENST00000497203 PPTC7Q8NI37 304 aa1.12□□□□□ -2.23
SMC4-225ENST00000497203 ZNF431Q8TF32 576 aaPredicted RBP1.12□□□□□ -2.23
SMC4-225ENST00000497203 BORCS5Q969J3 196 aa1.12□□□□□ -2.23
SMC4-225ENST00000497203 HEATR1Q9H583 2144 aaKnown RBP1.12□□□□□ -2.23
SMC4-225ENST00000497203 ARHGEF11O15085 1522 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 TRAV10A0A0B4J240 114 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 E7EUB6 86 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 CRHP06850 196 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 TAS2R41P59536 307 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 SNCBQ16143 134 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 NUP35Q8NFH5 326 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 OR5D16Q8NGK9 328 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 ZNF714Q96N38 554 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 BOLA2Q9H3K6 86 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 BIN3Q9NQY0 253 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 ORMDL1Q9P0S3 153 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 SS18L2Q9UHA2 77 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 TENM1Q9UKZ4 2725 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 NCAPD3P42695 1498 aa1.11□□□□□ -2.23
SMC4-225ENST00000497203 MCM3APO60318 1980 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 ROCK1Q13464 1354 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 NUP210LQ5VU65 1888 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 TRAV5A0A0B4J249 113 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 TRBV6-4A0A1B0GX49 114 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 TLCD2A6NGC4 264 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 TMEM238C9JI98 176 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 ERC2-IT1O76042 136 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 TRGC2P03986 189 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 IFNA4P05014 189 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 NEFHP12036 1026 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 RAB5CP51148 216 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 CDK6Q00534 326 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 GRINAQ7Z429 371 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 STX19Q8N4C7 294 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 SMIM20Q8N5G0 67 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 OR4K15Q8NH41 348 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 MUCL1Q96DR8 90 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 GPX7Q96SL4 187 aaPredicted RBP1.1□□□□□ -2.23
SMC4-225ENST00000497203 RTL8AQ9BWD3 113 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 GID8Q9NWU2 228 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 TMEM14CQ9P0S9 112 aa1.1□□□□□ -2.23
SMC4-225ENST00000497203 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.09□□□□□ -2.23
SMC4-225ENST00000497203 IGHV1-58A0A0C4DH39 117 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 M0R233 179 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 MFSD11O43934 449 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 PIAS1O75925 651 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 ZNF25P17030 456 aaPredicted RBP1.09□□□□□ -2.23
SMC4-225ENST00000497203 PATE2Q6UY27 113 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 ZNF833PQ6ZTB9 187 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 PLEKHB2Q96CS7 222 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 ZHX1-C8orf76Q96EF9 292 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 LINC00052Q96N35 136 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 CACYBPQ9HB71 228 aaKnown RBP1.09□□□□□ -2.23
SMC4-225ENST00000497203 TAS2R7Q9NYW3 318 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 LAMTOR3Q9UHA4 124 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 OR52A1Q9UKL2 312 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 UFC1Q9Y3C8 167 aa1.09□□□□□ -2.23
SMC4-225ENST00000497203 CAMSAP2Q08AD1 1489 aa1.09□□□□□ -2.24
SMC4-225ENST00000497203 CEP164Q9UPV0 1460 aa1.09□□□□□ -2.24
SMC4-225ENST00000497203 PLXNA4Q9HCM2 1894 aa1.09□□□□□ -2.24
SMC4-225ENST00000497203 LAMB4A4D0S4 1761 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 MYO5AQ9Y4I1 1855 aaKnown RBP1.08□□□□□ -2.24
SMC4-225ENST00000497203 A0A087WSZ3 146 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 CCL25O15444 150 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 NUPR1O60356 82 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 INSL3P51460 131 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 TMBIM6P55061 237 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 ARPP19P56211 112 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 PPP1R2P3Q6NXS1 205 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 C3orf33Q6P1S2 294 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 CROCCP2Q86T23 111 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 TEN1Q86WV5 123 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 POP5Q969H6 163 aaKnown RBP1.08□□□□□ -2.24
SMC4-225ENST00000497203 CHCHD1Q96BP2 118 aaKnown RBP1.08□□□□□ -2.24
SMC4-225ENST00000497203 HOPXQ9BPY8 73 aaPredicted RBP1.08□□□□□ -2.24
SMC4-225ENST00000497203 MAP1LC3BQ9GZQ8 125 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 MYH3P11055 1940 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 MYLKQ15746 1914 aa1.08□□□□□ -2.24
SMC4-225ENST00000497203 SNRNP200O75643 2136 aaKnown RBP1.07□□□□□ -2.24
SMC4-225ENST00000497203 YTHDC2Q9H6S0 1430 aaKnown RBP1.07□□□□□ -2.24
SMC4-225ENST00000497203 CHD3Q12873 2000 aaKnown RBP1.07□□□□□ -2.24
SMC4-225ENST00000497203 PPP5D1E7EU14 171 aa1.07□□□□□ -2.24
SMC4-225ENST00000497203 HIST1H2BKO60814 126 aa1.07□□□□□ -2.24
SMC4-225ENST00000497203 DNAL4O96015 105 aa1.07□□□□□ -2.24
SMC4-225ENST00000497203 CD2P06729 351 aa1.07□□□□□ -2.24
SMC4-225ENST00000497203 HIST1H2BJP06899 126 aa1.07□□□□□ -2.24
SMC4-225ENST00000497203 CXCL8P10145 99 aa1.07□□□□□ -2.24
SMC4-225ENST00000497203 SERPINB1P30740 379 aa1.07□□□□□ -2.24
SMC4-225ENST00000497203 S100A5P33763 92 aa1.07□□□□□ -2.24
SMC4-225ENST00000497203 KLRD1Q13241 179 aa1.07□□□□□ -2.24
SMC4-225ENST00000497203 C1orf134Q5TEV5 83 aa1.07□□□□□ -2.24
SMC4-225ENST00000497203 C1orf140Q5VVS0 124 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms