RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 FOXI1Q12951 378 aa10.38□□□□□ -0.75
VEGFA-215ENST00000497139 FAM104BQ5XKR9 115 aa10.38□□□□□ -0.75
VEGFA-215ENST00000497139 INO80CQ6PI98 192 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-215ENST00000497139 SRSF12Q8WXF0 261 aaKnown RBP10.38□□□□□ -0.75
VEGFA-215ENST00000497139 SDK2Q58EX2 2172 aa10.38□□□□□ -0.75
VEGFA-215ENST00000497139 LINC01546A6NGU7 62 aa10.38□□□□□ -0.75
VEGFA-215ENST00000497139 D6R8Y8 96 aa10.38□□□□□ -0.75
VEGFA-215ENST00000497139 APOMO95445 188 aa10.38□□□□□ -0.75
VEGFA-215ENST00000497139 SSBP2P81877 361 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-215ENST00000497139 OR10X1Q8NGY0 326 aa10.38□□□□□ -0.75
VEGFA-215ENST00000497139 PGPEP1Q9NXJ5 209 aa10.38□□□□□ -0.75
VEGFA-215ENST00000497139 IGKV1D-17A0A075B6S4 117 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 LINC01619G3V211 115 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 LAMTOR5O43504 91 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 IGLV2-11P01706 119 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 SAA1P0DJI8 122 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-215ENST00000497139 RRN3P1Q2M238 152 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 TMEM75Q8N9X5 138 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 TRGV9Q99603 122 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 CDIP1Q9H305 208 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 WI2-2373I1.2A0A1W2PRP0 233 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 NPIPB5A8MRT5 1133 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 SRRM5B3KS81 715 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 CFHR2P36980 270 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 ATP5G2Q06055 141 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 C17orf58Q2M2W7 97 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 C12orf74Q32Q52 190 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 CIARTQ8N365 385 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-215ENST00000497139 TMEM14CQ9P0S9 112 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 HHLA3Q9XRX5 114 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
VEGFA-215ENST00000497139 DYSFO75923 2080 aa10.36□□□□□ -0.75
VEGFA-215ENST00000497139 A0A1B0GWB2 263 aa10.36□□□□□ -0.75
VEGFA-215ENST00000497139 KLF17Q5JT82 389 aaPredicted RBP10.36□□□□□ -0.75
VEGFA-215ENST00000497139 PCSK5Q92824 1860 aa10.36□□□□□ -0.75
VEGFA-215ENST00000497139 LY6G6EA0A0G2JKS1 128 aa10.36□□□□□ -0.75
VEGFA-215ENST00000497139 ZNF562Q6V9R5 426 aa10.36□□□□□ -0.75
VEGFA-215ENST00000497139 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
VEGFA-215ENST00000497139 U3KQA8 63 aa10.36□□□□□ -0.75
VEGFA-215ENST00000497139 TIMM8AO60220 97 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-215ENST00000497139 IGKCP01834 107 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 Q0VFX4 171 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 ODF1Q14990 250 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 LOC389332A0A1B0GUA5 103 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 PLAUP00749 431 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 IGHV3-13P01766 116 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 PRNTQ86SH4 94 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 SYT8Q8NBV8 401 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 PSG8Q9UQ74 426 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 IGKV2D-26A0A0A0MRZ7 120 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 ATP5LO75964 103 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 ORM2P19652 201 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 GAGE5Q13069 117 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 GAGE6Q13070 117 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 Q6ZUT4 128 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 C20orf78Q9BR46 151 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 C12orf49Q9H741 205 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 LINC00574Q9H8X3 128 aa10.35□□□□□ -0.75
VEGFA-215ENST00000497139 IGKV1-16P04430 117 aa10.34□□□□□ -0.75
VEGFA-215ENST00000497139 HOXA4Q00056 320 aaPredicted RBP10.34□□□□□ -0.75
VEGFA-215ENST00000497139 SLC25A39Q9BZJ4 359 aaPredicted RBP10.34□□□□□ -0.75
VEGFA-215ENST00000497139 SDK1Q7Z5N4 2213 aa10.34□□□□□ -0.75
VEGFA-215ENST00000497139 K7ESF4 209 aa10.34□□□□□ -0.75
VEGFA-215ENST00000497139 CRYGCP07315 174 aa10.34□□□□□ -0.75
VEGFA-215ENST00000497139 CCL11P51671 97 aa10.34□□□□□ -0.75
VEGFA-215ENST00000497139 TCTAP57738 103 aa10.34□□□□□ -0.75
VEGFA-215ENST00000497139 TWIST1Q15672 202 aa10.34□□□□□ -0.75
VEGFA-215ENST00000497139 TMEM167AQ8TBQ9 72 aa10.34□□□□□ -0.75
VEGFA-215ENST00000497139 ZNF785A8K8V0 405 aa10.33□□□□□ -0.76
VEGFA-215ENST00000497139 DPM2O94777 84 aa10.33□□□□□ -0.76
VEGFA-215ENST00000497139 INSL3P51460 131 aa10.33□□□□□ -0.76
VEGFA-215ENST00000497139 PVRIGQ6DKI7 326 aa10.33□□□□□ -0.76
VEGFA-215ENST00000497139 MRPL51Q4U2R6 128 aaKnown RBP10.33□□□□□ -0.76
VEGFA-215ENST00000497139 CFAP126Q5VTH2 177 aa10.33□□□□□ -0.76
VEGFA-215ENST00000497139 PEAR1Q5VY43 1037 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-215ENST00000497139 GOLT1AQ6ZVE7 132 aa10.33□□□□□ -0.76
VEGFA-215ENST00000497139 LEAP2Q969E1 77 aa10.33□□□□□ -0.76
VEGFA-215ENST00000497139 RNF183Q96D59 192 aa10.33□□□□□ -0.76
VEGFA-215ENST00000497139 FCER1GP30273 86 aa10.32□□□□□ -0.76
VEGFA-215ENST00000497139 CXCL12P48061 93 aa10.32□□□□□ -0.76
VEGFA-215ENST00000497139 MBNL2Q5VZF2 373 aaKnown RBP10.32□□□□□ -0.76
VEGFA-215ENST00000497139 LYPD1Q8N2G4 141 aa10.32□□□□□ -0.76
VEGFA-215ENST00000497139 HARBI1Q96MB7 349 aa10.32□□□□□ -0.76
VEGFA-215ENST00000497139 TRAV8-1A0A0A6YYK1 113 aa10.32□□□□□ -0.76
VEGFA-215ENST00000497139 WT1-ASQ06250 92 aa10.32□□□□□ -0.76
VEGFA-215ENST00000497139 TMEM158Q8WZ71 300 aa10.32□□□□□ -0.76
VEGFA-215ENST00000497139 FLYWCH2Q96CP2 140 aaKnown RBP10.32□□□□□ -0.76
VEGFA-215ENST00000497139 TANC2Q9HCD6 1990 aa10.32□□□□□ -0.76
VEGFA-215ENST00000497139 ZNF833PQ6ZTB9 187 aa10.31□□□□□ -0.76
VEGFA-215ENST00000497139 TMEM178AQ8NBL3 297 aa10.31□□□□□ -0.76
VEGFA-215ENST00000497139 ANAPC13Q9BS18 74 aa10.31□□□□□ -0.76
VEGFA-215ENST00000497139 TTTY12Q9BZ98 90 aa10.31□□□□□ -0.76
VEGFA-215ENST00000497139 NXT2Q9NPJ8 142 aaKnown RBP10.31□□□□□ -0.76
VEGFA-215ENST00000497139 FSCN3Q9NQT6 498 aa10.31□□□□□ -0.76
VEGFA-215ENST00000497139 ZNF71Q9NQZ8 489 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-215ENST00000497139 HIGD1AQ9Y241 93 aa10.31□□□□□ -0.76
VEGFA-215ENST00000497139 C16orf97H3BN30 126 aa10.31□□□□□ -0.76
VEGFA-215ENST00000497139 MT-ATP8P03928 68 aa10.31□□□□□ -0.76
VEGFA-215ENST00000497139 MAGEA5P43359 124 aa10.31□□□□□ -0.76
VEGFA-215ENST00000497139 SPINK14Q6IE38 97 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms