RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 C16orf54Q6UWD8 224 aa13.84□□□□□ -0.19
RGP1-202ENST00000496906 FAM213BQ8TBF2 198 aa13.84□□□□□ -0.19
RGP1-202ENST00000496906 RNF141Q8WVD5 230 aa13.84□□□□□ -0.19
RGP1-202ENST00000496906 FAM167A-AS1Q96KT0 104 aa13.84□□□□□ -0.19
RGP1-202ENST00000496906 SLC25A2Q9BXI2 301 aa13.84□□□□□ -0.19
RGP1-202ENST00000496906 TMEM231Q9H6L2 316 aa13.84□□□□□ -0.19
RGP1-202ENST00000496906 VWFP04275 2813 aa13.84□□□□□ -0.19
RGP1-202ENST00000496906 CTXND1A0A1B0GTU2 59 aa13.83□□□□□ -0.19
RGP1-202ENST00000496906 WFDC9Q8NEX5 89 aa13.83□□□□□ -0.19
RGP1-202ENST00000496906 GLMPQ8WWB7 406 aa13.83□□□□□ -0.19
RGP1-202ENST00000496906 GRAMD2BQ96HH9 432 aa13.83□□□□□ -0.19
RGP1-202ENST00000496906 MLXQ9UH92 298 aa13.83□□□□□ -0.19
RGP1-202ENST00000496906 RNF24Q9Y225 148 aa13.83□□□□□ -0.19
RGP1-202ENST00000496906 HMGB3O15347 200 aaKnown RBP13.83□□□□□ -0.2
RGP1-202ENST00000496906 OR8I2Q8N0Y5 310 aa13.83□□□□□ -0.2
RGP1-202ENST00000496906 UBQLN2Q9UHD9 624 aa13.83□□□□□ -0.2
RGP1-202ENST00000496906 STAG3L2P0CL84 134 aa13.82□□□□□ -0.2
RGP1-202ENST00000496906 STAG3L3P0CL85 134 aa13.82□□□□□ -0.2
RGP1-202ENST00000496906 CD33P20138 364 aa13.82□□□□□ -0.2
RGP1-202ENST00000496906 TAS2R45P59539 299 aa13.82□□□□□ -0.2
RGP1-202ENST00000496906 KHDC3LQ587J8 217 aa13.82□□□□□ -0.2
RGP1-202ENST00000496906 ZNF705EA8MWA4 302 aaPredicted RBP13.81□□□□□ -0.2
RGP1-202ENST00000496906 MRPS12O15235 138 aaKnown RBP13.81□□□□□ -0.2
RGP1-202ENST00000496906 SAP30O75446 220 aa13.81□□□□□ -0.2
RGP1-202ENST00000496906 RPL7P18124 248 aaKnown RBP13.81□□□□□ -0.2
RGP1-202ENST00000496906 ZNF503Q96F45 646 aa13.81□□□□□ -0.2
RGP1-202ENST00000496906 GPR82Q96P67 336 aa13.81□□□□□ -0.2
RGP1-202ENST00000496906 SELENOKQ9Y6D0 94 aa13.81□□□□□ -0.2
RGP1-202ENST00000496906 MAP1LC3B2A6NCE7 125 aa13.8□□□□□ -0.2
RGP1-202ENST00000496906 GP9P14770 177 aa13.8□□□□□ -0.2
RGP1-202ENST00000496906 FAM90A2PQ658T7 463 aa13.8□□□□□ -0.2
RGP1-202ENST00000496906 LCN15Q6UWW0 184 aa13.8□□□□□ -0.2
RGP1-202ENST00000496906 SIGLEC15Q6ZMC9 328 aa13.8□□□□□ -0.2
RGP1-202ENST00000496906 BPIFA4PQ86YQ2 179 aa13.8□□□□□ -0.2
RGP1-202ENST00000496906 DYNLRB2Q8TF09 96 aa13.8□□□□□ -0.2
RGP1-202ENST00000496906 MBD3L1Q8WWY6 194 aa13.8□□□□□ -0.2
RGP1-202ENST00000496906 MAP1LC3BQ9GZQ8 125 aa13.8□□□□□ -0.2
RGP1-202ENST00000496906 TMEM14CQ9P0S9 112 aa13.8□□□□□ -0.2
RGP1-202ENST00000496906 OR7C2O60412 319 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 H2AFB1P0C5Y9 115 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 ARL14EPLP0DKL9 152 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 PQLC2Q6ZP29 291 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 ZNF767PQ75MW2 155 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 STXBP6Q8NFX7 210 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 PYYP10082 97 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 FGF8P55075 233 aaPredicted RBP13.79□□□□□ -0.2
RGP1-202ENST00000496906 DEFB114Q30KQ6 69 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 TCF24Q7RTU0 167 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 LRRC20Q8TCA0 184 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 SFT2D1Q8WV19 159 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 SAT2Q96F10 170 aaPredicted RBP13.79□□□□□ -0.2
RGP1-202ENST00000496906 PAXXQ9BUH6 204 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 OR51M1Q9H341 326 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 SMAD5-AS1Q9Y6J3 95 aa13.79□□□□□ -0.2
RGP1-202ENST00000496906 CMYA5Q8N3K9 4069 aa13.78□□□□□ -0.2
RGP1-202ENST00000496906 HELTA6NFD8 242 aa13.78□□□□□ -0.2
RGP1-202ENST00000496906 CXorf1O96002 111 aa13.78□□□□□ -0.2
RGP1-202ENST00000496906 CD5P06127 495 aa13.78□□□□□ -0.2
RGP1-202ENST00000496906 IGLC2P0DOY2 106 aa13.78□□□□□ -0.2
RGP1-202ENST00000496906 GALR1P47211 349 aa13.78□□□□□ -0.2
RGP1-202ENST00000496906 C17orf77Q96MU5 243 aa13.78□□□□□ -0.2
RGP1-202ENST00000496906 MCRIP2Q9BUT9 160 aaKnown RBP13.78□□□□□ -0.2
RGP1-202ENST00000496906 IGLV1-51P01701 117 aa13.77□□□□□ -0.21
RGP1-202ENST00000496906 OR10J4P0C629 311 aa13.77□□□□□ -0.21
RGP1-202ENST00000496906 BLOC1S1P78537 153 aa13.77□□□□□ -0.21
RGP1-202ENST00000496906 CD300EQ496F6 205 aaPredicted RBP13.77□□□□□ -0.21
RGP1-202ENST00000496906 C9orf66Q5T8R8 295 aa13.77□□□□□ -0.21
RGP1-202ENST00000496906 FXYD5Q96DB9 178 aa13.77□□□□□ -0.21
RGP1-202ENST00000496906 DNHD1Q96M86 4753 aa13.76□□□□□ -0.21
RGP1-202ENST00000496906 TRAV1-1A0A0B4J248 108 aa13.76□□□□□ -0.21
RGP1-202ENST00000496906 H3BQ15 152 aa13.76□□□□□ -0.21
RGP1-202ENST00000496906 HIST1H1EP10412 219 aaKnown RBP13.76□□□□□ -0.21
RGP1-202ENST00000496906 GCHFRP30047 84 aa13.76□□□□□ -0.21
RGP1-202ENST00000496906 INSL3P51460 131 aa13.76□□□□□ -0.21
RGP1-202ENST00000496906 UBE2L3P68036 154 aaKnown RBP13.76□□□□□ -0.21
RGP1-202ENST00000496906 TMEM61Q8N0U2 210 aa13.76□□□□□ -0.21
RGP1-202ENST00000496906 HRH4Q9H3N8 390 aa13.76□□□□□ -0.21
RGP1-202ENST00000496906 NOTCH3Q9UM47 2321 aa13.76□□□□□ -0.21
RGP1-202ENST00000496906 A0A087X0K7 114 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 A0A1B0GV50 99 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 NMBP08949 121 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 SNRPCP09234 159 aaKnown RBP13.75□□□□□ -0.21
RGP1-202ENST00000496906 ATF4P18848 351 aaPredicted RBP13.75□□□□□ -0.21
RGP1-202ENST00000496906 RPL11P62913 178 aaKnown RBP13.75□□□□□ -0.21
RGP1-202ENST00000496906 PRR31Q5SQ13 230 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 PCNPQ8WW12 178 aaKnown RBP13.75□□□□□ -0.21
RGP1-202ENST00000496906 ZNF586Q9NXT0 402 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 IGKV3-7A0A075B6H7 116 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 ZNF785A8K8V0 405 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 RGS13O14921 159 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 IGLL1P15814 213 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 OR2K2Q8NGT1 345 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 SUN5Q8TC36 379 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 TMPRSS5Q9H3S3 457 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 NRN1Q9NPD7 142 aa13.75□□□□□ -0.21
RGP1-202ENST00000496906 TRAV25A0A0B4J276 109 aa13.74□□□□□ -0.21
RGP1-202ENST00000496906 TSPAN4O14817 238 aa13.74□□□□□ -0.21
RGP1-202ENST00000496906 HBE1P02100 147 aa13.74□□□□□ -0.21
RGP1-202ENST00000496906 NBEAP1P0C6P0 100 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms