RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 MRPL27Q9P0M9 148 aaKnown RBP16.6■□□□□ 0.25
FGFR1-223ENST00000496296 EPDR1Q9UM22 224 aa16.6■□□□□ 0.25
FGFR1-223ENST00000496296 SOX21Q9Y651 276 aaPredicted RBP16.6■□□□□ 0.25
FGFR1-223ENST00000496296 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.6■□□□□ 0.257e-7■■■■□ 19.5
FGFR1-223ENST00000496296 MYO9AB2RTY4 2548 aa16.59■□□□□ 0.25
FGFR1-223ENST00000496296 PKIAP61925 76 aa16.59■□□□□ 0.25
FGFR1-223ENST00000496296 RPL19P84098 196 aaKnown RBP16.59■□□□□ 0.25
FGFR1-223ENST00000496296 TMEM18Q96B42 140 aa16.59■□□□□ 0.25
FGFR1-223ENST00000496296 CR1P17927 2039 aa16.59■□□□□ 0.25
FGFR1-223ENST00000496296 IGHV3-21A0A0B4J1V1 117 aa16.59■□□□□ 0.25
FGFR1-223ENST00000496296 SMIM27A0A1W2PRY6 76 aa16.59■□□□□ 0.25
FGFR1-223ENST00000496296 HSPB9Q9BQS6 159 aa16.59■□□□□ 0.25
FGFR1-223ENST00000496296 AKAP9Q99996 3911 aa16.58■□□□□ 0.24
FGFR1-223ENST00000496296 IBA57Q5T440 356 aaKnown RBP16.58■□□□□ 0.24
FGFR1-223ENST00000496296 ASPHD1Q5U4P2 390 aa16.58■□□□□ 0.24
FGFR1-223ENST00000496296 TMEM68Q96MH6 324 aa16.58■□□□□ 0.24
FGFR1-223ENST00000496296 GNB1LQ9BYB4 327 aa16.58■□□□□ 0.24
FGFR1-223ENST00000496296 RNASE7Q9H1E1 156 aaKnown RBP16.58■□□□□ 0.24
FGFR1-223ENST00000496296 THYN1Q9P016 225 aa16.58■□□□□ 0.24
FGFR1-223ENST00000496296 A6NDX4 124 aa16.57■□□□□ 0.24
FGFR1-223ENST00000496296 M0QZK8 103 aa16.57■□□□□ 0.24
FGFR1-223ENST00000496296 GZMBP10144 247 aa16.57■□□□□ 0.24
FGFR1-223ENST00000496296 LY6EQ16553 131 aa16.57■□□□□ 0.24
FGFR1-223ENST00000496296 GSX1Q9H4S2 264 aaPredicted RBP16.57■□□□□ 0.24
FGFR1-223ENST00000496296 IGLV11-55A0A075B6I3 123 aa16.56■□□□□ 0.24
FGFR1-223ENST00000496296 TOMM40O96008 361 aa16.56■□□□□ 0.24
FGFR1-223ENST00000496296 EGR2P11161 476 aaPredicted RBP16.56■□□□□ 0.24
FGFR1-223ENST00000496296 C5orf17Q8NAS9 161 aa16.56■□□□□ 0.24
FGFR1-223ENST00000496296 TMUB1Q9BVT8 246 aa16.56■□□□□ 0.24
FGFR1-223ENST00000496296 SLC25A39Q9BZJ4 359 aaPredicted RBP16.56■□□□□ 0.24
FGFR1-223ENST00000496296 TRAV30A0A087WSZ9 112 aa16.56■□□□□ 0.24
FGFR1-223ENST00000496296 FSHBP01225 129 aa16.56■□□□□ 0.24
FGFR1-223ENST00000496296 MT-ND6P03923 174 aa16.56■□□□□ 0.24
FGFR1-223ENST00000496296 ADMP35318 185 aa16.56■□□□□ 0.24
FGFR1-223ENST00000496296 UNQ5815/PRO19632Q6UWF5 114 aa16.56■□□□□ 0.24
FGFR1-223ENST00000496296 BAGE2Q86Y30 109 aa16.56■□□□□ 0.24
FGFR1-223ENST00000496296 GBGT1Q8N5D6 347 aa16.56■□□□□ 0.24
FGFR1-223ENST00000496296 LINC00479Q96M42 142 aa16.56■□□□□ 0.24
FGFR1-223ENST00000496296 CELSR1Q9NYQ6 3014 aa16.55■□□□□ 0.24
FGFR1-223ENST00000496296 TSTD3H0UI37 97 aa16.55■□□□□ 0.24
FGFR1-223ENST00000496296 ATP6V0E1O15342 81 aa16.55■□□□□ 0.24
FGFR1-223ENST00000496296 RD3LP0DJH9 198 aa16.55■□□□□ 0.24
FGFR1-223ENST00000496296 RANP62826 216 aaKnown RBP16.55■□□□□ 0.24
FGFR1-223ENST00000496296 DEFB112Q30KQ8 113 aa16.55■□□□□ 0.24
FGFR1-223ENST00000496296 WDR73Q6P4I2 378 aa16.55■□□□□ 0.24
FGFR1-223ENST00000496296 ZNF600Q6ZNG1 722 aa16.55■□□□□ 0.24
FGFR1-223ENST00000496296 OR8I2Q8N0Y5 310 aa16.55■□□□□ 0.24
FGFR1-223ENST00000496296 TEX29Q8N6K0 151 aa16.55■□□□□ 0.24
FGFR1-223ENST00000496296 FANCD2OSQ96PS1 177 aa16.55■□□□□ 0.24
FGFR1-223ENST00000496296 ATG101Q9BSB4 218 aa16.55■□□□□ 0.24
FGFR1-223ENST00000496296 CHRDL1Q9BU40 450 aa16.55■□□□□ 0.24
FGFR1-223ENST00000496296 PGPA6NDG6 321 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 SMAD7O15105 426 aaKnown RBP16.54■□□□□ 0.24
FGFR1-223ENST00000496296 SLC25A5P05141 298 aaKnown RBP16.54■□□□□ 0.24
FGFR1-223ENST00000496296 HIST1H1EP10412 219 aaKnown RBP16.54■□□□□ 0.24
FGFR1-223ENST00000496296 MGST1P10620 155 aaKnown RBP16.54■□□□□ 0.24
FGFR1-223ENST00000496296 LYZP61626 148 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 ECSCRQ19T08 205 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 C9orf152Q5JTZ5 239 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 C9orf139Q6ZV77 190 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 SHANK2-AS3Q9BTD1 123 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 CBLN1P23435 193 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 DEFA6Q01524 100 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 KLK9Q2XQG4 91 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 BCL6BQ8N143 479 aaPredicted RBP16.54■□□□□ 0.24
FGFR1-223ENST00000496296 FAM110DQ8TAY7 271 aaPredicted RBP16.54■□□□□ 0.24
FGFR1-223ENST00000496296 MLST8Q9BVC4 326 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 MRPL18Q9H0U6 180 aaKnown RBP16.54■□□□□ 0.24
FGFR1-223ENST00000496296 OTORQ9NRC9 128 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 KLK9Q9UKQ9 250 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 RNF24Q9Y225 148 aa16.54■□□□□ 0.24
FGFR1-223ENST00000496296 WI2-2373I1.2A0A1W2PRP0 233 aa16.53■□□□□ 0.24
FGFR1-223ENST00000496296 SH2D7A6NKC9 451 aaPredicted RBP16.53■□□□□ 0.24
FGFR1-223ENST00000496296 H3BRN7 92 aa16.53■□□□□ 0.24
FGFR1-223ENST00000496296 CIARTQ8N365 385 aaPredicted RBP16.53■□□□□ 0.24
FGFR1-223ENST00000496296 FMC1Q96HJ9 113 aa16.53■□□□□ 0.24
FGFR1-223ENST00000496296 Q9H3A6 140 aa16.53■□□□□ 0.24
FGFR1-223ENST00000496296 IZUMO1RA6ND01 250 aa16.52■□□□□ 0.24
FGFR1-223ENST00000496296 AMY1AP04745 511 aa16.52■□□□□ 0.24
FGFR1-223ENST00000496296 ESDP10768 282 aa16.52■□□□□ 0.24
FGFR1-223ENST00000496296 RASL11AQ6T310 242 aa16.52■□□□□ 0.24
FGFR1-223ENST00000496296 BLNKQ8WV28 456 aa16.52■□□□□ 0.24
FGFR1-223ENST00000496296 TRBV6-1A0A0K0K1D8 114 aa16.52■□□□□ 0.23
FGFR1-223ENST00000496296 GNG5P63218 68 aa16.52■□□□□ 0.23
FGFR1-223ENST00000496296 ZNF491Q8N8L2 437 aa16.52■□□□□ 0.23
FGFR1-223ENST00000496296 GRAMD2BQ96HH9 432 aa16.52■□□□□ 0.23
FGFR1-223ENST00000496296 GPR82Q96P67 336 aa16.52■□□□□ 0.23
FGFR1-223ENST00000496296 PRRC2AP48634 2157 aaKnown RBP16.51■□□□□ 0.23
FGFR1-223ENST00000496296 TRAV34A0A0B4J273 112 aa16.51■□□□□ 0.23
FGFR1-223ENST00000496296 ZNF705GA8MUZ8 300 aaPredicted RBP16.51■□□□□ 0.23
FGFR1-223ENST00000496296 IER3P46695 156 aa16.51■□□□□ 0.23
FGFR1-223ENST00000496296 UBE2G1P62253 170 aa16.51■□□□□ 0.23
FGFR1-223ENST00000496296 WIPF2Q8TF74 440 aaPredicted RBP16.51■□□□□ 0.23
FGFR1-223ENST00000496296 LTAP01374 205 aa16.5■□□□□ 0.23
FGFR1-223ENST00000496296 TCRAP04437 139 aa16.5■□□□□ 0.23
FGFR1-223ENST00000496296 DDTP30046 118 aa16.5■□□□□ 0.23
FGFR1-223ENST00000496296 MFAP4P55083 255 aa16.5■□□□□ 0.23
FGFR1-223ENST00000496296 Q0VG73 95 aa16.5■□□□□ 0.23
FGFR1-223ENST00000496296 TMEM136Q6ZRR5 245 aa16.5■□□□□ 0.23
FGFR1-223ENST00000496296 S100A7AQ86SG5 101 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms