RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 PKMYT1Q99640 499 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 CBLN4Q9NTU7 201 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 BAIAP2Q9UQB8 552 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 CCDC171Q6TFL3 1326 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 ANKRD31Q8N7Z5 1873 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 KDM5BQ9UGL1 1544 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 ODAMA1E959 279 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 HMSDA8MTL9 139 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 MIF4GDA9UHW6 222 aaKnown RBP1.81□□□□□ -2.12
CLK1-214ENST00000496205 C17orf112F2Z3M2 114 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 LY6LH3BQJ8 138 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 RER1O15258 196 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 TIMM17BO60830 172 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 IGLV6-57P01721 117 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 APOC1P02654 83 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 CLPSP04118 112 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 BAALC-AS2P0C853 105 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 ZNF705BP0CI00 300 aaPredicted RBP1.81□□□□□ -2.12
CLK1-214ENST00000496205 DNAJB13P59910 316 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 TMEM258P61165 79 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 MRPS36P82909 103 aaKnown RBP1.81□□□□□ -2.12
CLK1-214ENST00000496205 ERHP84090 104 aaKnown RBP1.81□□□□□ -2.12
CLK1-214ENST00000496205 HIST1H1AQ02539 215 aaPredicted RBP1.81□□□□□ -2.12
CLK1-214ENST00000496205 RELAQ04206 551 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 Q5XG85 94 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 ZNF826PQ6ZT77 177 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 LINC00471Q8N535 108 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 AQP3Q92482 292 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 BCL2L10Q9HD36 194 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 C14orf132Q9NPU4 83 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 OR5AC2Q9NZP5 309 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 SBF1O95248 1867 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 GREB1Q4ZG55 1949 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 KDM6AO15550 1401 aaPredicted RBP1.81□□□□□ -2.12
CLK1-214ENST00000496205 KIAA1107Q9UPP5 1409 aa1.81□□□□□ -2.12
CLK1-214ENST00000496205 WDR90Q96KV7 1748 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 NUP98P52948 1817 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 EML6Q6ZMW3 1958 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 A0A1B0GW64 132 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 FAM92AA1XBS5 289 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 PLXNB1O43157 2135 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 LYRM1O43325 122 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 SMIM24O75264 130 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 PROSCO94903 275 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 CTSGP08311 255 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 P0C880 135 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 TRGC1P0CF51 173 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 HINT1P49773 126 aaPredicted RBP1.8□□□□□ -2.12
CLK1-214ENST00000496205 QRFPP83859 136 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 KLRD1Q13241 179 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 ESRGQ1W209 222 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 ZNF181Q2M3W8 571 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 TMEM14EPQ6UXP3 125 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 PATE2Q6UY27 113 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 SOSTDC1Q6X4U4 206 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 C7orf65Q6ZTY9 151 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 MORN4Q8NDC4 146 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 OR8B3Q8NGG8 313 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 OR5H6Q8NGV6 325 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 OR4K15Q8NH41 348 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 DIRC1Q969H9 104 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 PRELID3AQ96N28 172 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 SMIM3Q9BZL3 60 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 ERG28Q9UKR5 140 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 LY96Q9Y6Y9 160 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 RFX7Q2KHR2 1363 aa1.8□□□□□ -2.12
CLK1-214ENST00000496205 SMG6Q86US8 1419 aaKnown RBP1.8□□□□□ -2.12
CLK1-214ENST00000496205 TCOF1Q13428 1488 aaKnown RBP1.8□□□□□ -2.12
CLK1-214ENST00000496205 RIMS1Q86UR5 1692 aaKnown RBP1.8□□□□□ -2.12
CLK1-214ENST00000496205 CACNA1DQ01668 2161 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 IGKV2-24A0A0C4DH68 120 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 OR2T8A6NH00 312 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 UQCRQO14949 82 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 PMP2P02689 132 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 GPX1P07203 203 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 CTSDP07339 412 aaPredicted RBP1.79□□□□□ -2.12
CLK1-214ENST00000496205 CRYGSP22914 178 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 PEBP1P30086 187 aaKnown RBP1.79□□□□□ -2.12
CLK1-214ENST00000496205 ZNF345Q14585 488 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 NNATQ16517 81 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 TMEM244Q5VVB8 128 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 Q6ZQT0 140 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 Q6ZTI0 123 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 FAM216BQ8N7L0 139 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 TSTD1Q8NFU3 115 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 OR4C6Q8NH72 309 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 BRK1Q8WUW1 75 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 TMEM203Q969S6 136 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 C2orf88Q9BSF0 95 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 CCL26Q9Y258 94 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 DSPPQ9NZW4 1301 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 SLIT2O94813 1529 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 FER1L6Q2WGJ9 1857 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 SCN9AQ15858 1988 aa1.79□□□□□ -2.12
CLK1-214ENST00000496205 MYO16Q9Y6X6 1858 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 SMARCA4P51532 1647 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 KDM5CP41229 1560 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 PRG4Q92954 1404 aaPredicted RBP1.78□□□□□ -2.12
CLK1-214ENST00000496205 IGLV10-54A0A075B6I4 117 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms