RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 THYN1Q9P016 225 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 SMPXQ9UHP9 88 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 RLN2P04090 185 aa6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 RAB3BP20337 219 aa6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 FUSP35637 526 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 HLA-DRB3P79483 266 aa6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 PSG3Q16557 428 aa6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 IDNKQ5T6J7 187 aa6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 ATRAIDQ6UW56 229 aa6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 TMEM91Q6ZNR0 172 aa6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 COX8CQ7Z4L0 72 aa6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 OR1S1Q8NH92 325 aa6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 DEFB104AQ8WTQ1 72 aa6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 HINT2Q9BX68 163 aa6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 C20orf85Q9H1P6 137 aa6.74□□□□□ -1.33
SMARCAL1-213ENST00000496037 IGHV3-49A0A0A0MS15 119 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 IGHV7-4-1A0A0J9YVY3 117 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 ATG12O94817 140 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 REG1AP05451 166 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 CD5P06127 495 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 GNB3P16520 340 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 KRTAP10-1P60331 282 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 RAB5BP61020 215 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 KLF9Q13886 244 aaPredicted RBP6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 KLK9Q2XQG4 91 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 CDNFQ49AH0 187 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 SAPCD1Q5SSQ6 148 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 SPSB3Q6PJ21 355 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 TCF24Q7RTU0 167 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 JAGN1Q8N5M9 183 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 ZNF485Q8NCK3 441 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 CSNK1G2-AS1Q8NCQ2 148 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 GPR148Q8TDV2 347 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 FCAMRQ8WWV6 532 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 PHYHIPLQ96FC7 376 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 ADTRPQ96IZ2 230 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 C1QTNF4Q9BXJ3 329 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 KLK9Q9UKQ9 250 aa6.73□□□□□ -1.33
SMARCAL1-213ENST00000496037 DISC1C4P0D8 188 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 CCSO14618 274 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 CYB5BO43169 146 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 NAPSAO96009 420 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 APOHP02749 345 aaPredicted RBP6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 EIF4EP06730 217 aaKnown RBP6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 SERPINE2P07093 398 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 LIMS3P0CW19 117 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 LIMS4P0CW20 117 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 DUTP33316 252 aaKnown RBP6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 HAMPP81172 84 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 MRPS10P82664 201 aaKnown RBP6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 OR2G6Q5TZ20 316 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 FAM222AQ5U5X8 452 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 ZNF880Q6PDB4 577 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 SAMD12Q8N8I0 201 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 VSTM2AQ8TAG5 236 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 C15orf40Q8WUR7 153 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 SMIM4Q8WVI0 70 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 FAAP24Q9BTP7 215 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 MS4A6AQ9H2W1 248 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 CKLFQ9UBR5 152 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 DKK2Q9UBU2 259 aa6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 CARHSP1Q9Y2V2 147 aaKnown RBP6.72□□□□□ -1.33
SMARCAL1-213ENST00000496037 IGHV3OR16-13A0A075B7E8 117 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 IGHV3-74A0A0B4J1X5 117 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 A0A0D9SG52 128 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 EIF3GO75821 320 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 KBTBD11O94819 623 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 YIF1AO95070 293 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 NUDT3O95989 172 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 MAS1LP35410 378 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 TAS2R43P59537 309 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 ERVFC1-1P60608 527 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 NUTF2P61970 127 aaKnown RBP6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 ACTL10Q5JWF8 245 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 SFXN4Q6P4A7 337 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 ALKAL2Q6UX46 152 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 C6orf201Q7Z4U5 140 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 SELENOHQ8IZQ5 122 aaKnown RBP6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 SYS1Q8N2H4 156 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 FAM24BQ8N5W8 94 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 ACBD7Q8N6N7 88 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 VN1R17PQ8TDU5 208 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 UHRF2Q96PU4 802 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 ARL6Q9H0F7 186 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 RABAC1Q9UI14 185 aa6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 RBM7Q9Y580 266 aaKnown RBP6.71□□□□□ -1.34
SMARCAL1-213ENST00000496037 PKHD1L1Q86WI1 4243 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 TRAV2A0A0B4J234 112 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 TMEM218A2RU14 115 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 KNCNA6PVL3 124 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 LINC00473A8K010 186 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 E7EUB6 86 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 NDUFS6O75380 124 aaKnown RBP6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 CD3GP09693 182 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 CELP19835 753 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 RPL13AP40429 203 aaKnown RBP6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 CCR6P51684 374 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 ARFRP1Q13795 201 aa6.7□□□□□ -1.34
SMARCAL1-213ENST00000496037 C10orf91Q5T1B1 145 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms