RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 PFDN1O60925 122 aa11.04□□□□□ -0.64
HDAC9-226ENST00000496026 JTBO76095 146 aa11.04□□□□□ -0.64
HDAC9-226ENST00000496026 RPL7P18124 248 aaKnown RBP11.04□□□□□ -0.64
HDAC9-226ENST00000496026 CD300CQ08708 224 aa11.04□□□□□ -0.64
HDAC9-226ENST00000496026 DEFB121Q5J5C9 76 aa11.04□□□□□ -0.64
HDAC9-226ENST00000496026 MRAPQ8TCY5 172 aa11.04□□□□□ -0.64
HDAC9-226ENST00000496026 HYLS1Q96M11 299 aa11.04□□□□□ -0.64
HDAC9-226ENST00000496026 NRN1Q9NPD7 142 aa11.04□□□□□ -0.64
HDAC9-226ENST00000496026 TIMM9Q9Y5J7 89 aa11.04□□□□□ -0.64
HDAC9-226ENST00000496026 RFNGQ9Y644 331 aa11.04□□□□□ -0.64
HDAC9-226ENST00000496026 ATF4P18848 351 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-226ENST00000496026 ATP6V0CP27449 155 aa11.03□□□□□ -0.64
HDAC9-226ENST00000496026 ACOT6Q3I5F7 207 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-226ENST00000496026 ZFP69Q49AA0 526 aa11.03□□□□□ -0.64
HDAC9-226ENST00000496026 FAM78BQ5VT40 261 aa11.03□□□□□ -0.64
HDAC9-226ENST00000496026 MORN5Q5VZ52 161 aa11.03□□□□□ -0.64
HDAC9-226ENST00000496026 Q8N1Y9 231 aa11.03□□□□□ -0.64
HDAC9-226ENST00000496026 GNPNAT1Q96EK6 184 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-226ENST00000496026 UBQLN2Q9UHD9 624 aa11.03□□□□□ -0.64
HDAC9-226ENST00000496026 OR11H12B2RN74 326 aa11.02□□□□□ -0.65
HDAC9-226ENST00000496026 K7EQG2 157 aa11.02□□□□□ -0.65
HDAC9-226ENST00000496026 BCL2L11O43521 198 aa11.02□□□□□ -0.65
HDAC9-226ENST00000496026 CMC4P56277 68 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-226ENST00000496026 TMUB2Q71RG4 321 aa11.02□□□□□ -0.65
HDAC9-226ENST00000496026 BPIFA4PQ86YQ2 179 aa11.02□□□□□ -0.65
HDAC9-226ENST00000496026 DCANP1Q8TF63 244 aa11.02□□□□□ -0.65
HDAC9-226ENST00000496026 PSMG3Q9BT73 122 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-226ENST00000496026 SH3BGRL3Q9H299 93 aa11.02□□□□□ -0.65
HDAC9-226ENST00000496026 CYTL1Q9NRR1 136 aa11.02□□□□□ -0.65
HDAC9-226ENST00000496026 SMAD5-AS1Q9Y6J3 95 aa11.02□□□□□ -0.65
HDAC9-226ENST00000496026 TRAV5A0A0B4J249 113 aa11.01□□□□□ -0.65
HDAC9-226ENST00000496026 M6PRP20645 277 aa11.01□□□□□ -0.65
HDAC9-226ENST00000496026 MEOX2P50222 304 aa11.01□□□□□ -0.65
HDAC9-226ENST00000496026 ZNF471Q9BX82 626 aaPredicted RBP11.01□□□□□ -0.65
HDAC9-226ENST00000496026 MRPL32Q9BYC8 188 aaKnown RBP11.01□□□□□ -0.65
HDAC9-226ENST00000496026 TUBA4BQ9H853 241 aa11.01□□□□□ -0.65
HDAC9-226ENST00000496026 SEPSECSQ9HD40 501 aaKnown RBP11.01□□□□□ -0.65
HDAC9-226ENST00000496026 A0A1W2PPV4 95 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 ZNF688P0C7X2 276 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 IGHV4-30-4P0DP06 118 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 ID1P41134 155 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 SNRPD3P62318 126 aaKnown RBP11□□□□□ -0.65
HDAC9-226ENST00000496026 RHOBP62745 196 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 SERF2P84101 59 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 ODF3L2Q3SX64 289 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 LGALSLQ3ZCW2 172 aaPredicted RBP11□□□□□ -0.65
HDAC9-226ENST00000496026 MIR17HGQ75NE6 70 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 FAM24BQ8N5W8 94 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 DEFB125Q8N687 156 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 OR10G4Q8NGN3 311 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 OR10G9Q8NGN4 311 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 OR10G7Q8NGN6 311 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 OR2G3Q8NGZ4 309 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 WFDC10AQ9H1F0 79 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 FUT9Q9Y231 359 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 CMYA5Q8N3K9 4069 aa11□□□□□ -0.65
HDAC9-226ENST00000496026 NBEAL1Q6ZS30 2694 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 MBP02144 154 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 DEFB131AP59861 70 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 RAB2AP61019 212 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 EIF5AP63241 154 aaKnown RBP10.99□□□□□ -0.65
HDAC9-226ENST00000496026 SAMD13Q5VXD3 122 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 SPATA31B1PQ5VZV4 182 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 FAM122CQ6P4D5 195 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 LRRC20Q8TCA0 184 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 C16orf92Q96LL3 132 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 FAM110AQ9BQ89 295 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 MAP6D1Q9H9H5 199 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 C19orf73Q9NVV2 129 aa10.99□□□□□ -0.65
HDAC9-226ENST00000496026 MRPS12O15235 138 aaKnown RBP10.98□□□□□ -0.65
HDAC9-226ENST00000496026 C4BPBP20851 252 aa10.98□□□□□ -0.65
HDAC9-226ENST00000496026 PSMG4Q5JS54 123 aa10.98□□□□□ -0.65
HDAC9-226ENST00000496026 APRG1Q8IVJ8 170 aa10.98□□□□□ -0.65
HDAC9-226ENST00000496026 SLC25A2Q9BXI2 301 aa10.98□□□□□ -0.65
HDAC9-226ENST00000496026 SRD5A3Q9H8P0 318 aa10.98□□□□□ -0.65
HDAC9-226ENST00000496026 NOTCH1P46531 2555 aa10.98□□□□□ -0.65
HDAC9-226ENST00000496026 A0A087X0K7 114 aa10.97□□□□□ -0.65
HDAC9-226ENST00000496026 ISLRO14498 428 aa10.97□□□□□ -0.65
HDAC9-226ENST00000496026 SNRPCP09234 159 aaKnown RBP10.97□□□□□ -0.65
HDAC9-226ENST00000496026 PSMB3P49720 205 aa10.97□□□□□ -0.65
HDAC9-226ENST00000496026 TAS2R45P59539 299 aa10.97□□□□□ -0.65
HDAC9-226ENST00000496026 TMEM41BQ5BJD5 291 aa10.97□□□□□ -0.65
HDAC9-226ENST00000496026 AKR1C8PQ5T2L2 129 aa10.97□□□□□ -0.65
HDAC9-226ENST00000496026 LINC00052Q96N35 136 aa10.97□□□□□ -0.65
HDAC9-226ENST00000496026 TMEM14CQ9P0S9 112 aa10.97□□□□□ -0.65
HDAC9-226ENST00000496026 SOCS3O14543 225 aa10.96□□□□□ -0.65
HDAC9-226ENST00000496026 OR7C2O60412 319 aa10.96□□□□□ -0.65
HDAC9-226ENST00000496026 PYYP10082 97 aa10.96□□□□□ -0.65
HDAC9-226ENST00000496026 SPP1P10451 314 aa10.96□□□□□ -0.65
HDAC9-226ENST00000496026 TPT1P13693 172 aaKnown RBP10.96□□□□□ -0.65
HDAC9-226ENST00000496026 CDC34P49427 236 aaPredicted RBP10.96□□□□□ -0.65
HDAC9-226ENST00000496026 GUK1Q16774 197 aa10.96□□□□□ -0.65
HDAC9-226ENST00000496026 KHDC3LQ587J8 217 aa10.96□□□□□ -0.65
HDAC9-226ENST00000496026 LCN15Q6UWW0 184 aa10.96□□□□□ -0.65
HDAC9-226ENST00000496026 C9orf62Q8N4C0 152 aa10.96□□□□□ -0.65
HDAC9-226ENST00000496026 FAM167A-AS1Q96KT0 104 aa10.96□□□□□ -0.65
HDAC9-226ENST00000496026 C17orf77Q96MU5 243 aa10.96□□□□□ -0.65
HDAC9-226ENST00000496026 PAXXQ9BUH6 204 aa10.96□□□□□ -0.65
HDAC9-226ENST00000496026 OR51M1Q9H341 326 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms