RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, human

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-221	ENST00000495755	MBP	P02686	304 aa	Predicted RBP	5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	TCRB	P04435	133 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	IL5	P05113	134 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	METTL15P1	P0C7V9	234 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	S100A7	P31151	101 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	FXYD7	P58549	80 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	SELENOT	P62341	195 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	PRR20E	P86478	221 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	PRR20C	P86479	221 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	PRR20D	P86480	221 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	PRR20B	P86481	221 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	PRR20A	P86496	221 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	PSG9	Q00887	426 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	ARL16	Q0P5N6	197 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	FAM78B	Q5VT40	261 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	EBLN2	Q6P2I7	272 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	OR10P1	Q8NGE3	313 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	OR4B1	Q8NGF8	309 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	C16orf92	Q96LL3	132 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	SHANK2-AS3	Q9BTD1	123 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	SCRT1	Q9BWW7	348 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	SLC35B3	Q9H1N7	401 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	C20orf85	Q9H1P6	137 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	NPVF	Q9HCQ7	196 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	RPRM	Q9NS64	109 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	GSKIP	Q9P0R6	139 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	RCL1	Q9Y2P8	373 aa	Known RBP	5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	HECTD4	Q9Y4D8	3996 aa		5.18	□□□□□ -1.58
VPS52-221	ENST00000495755	DEDD	O75618	318 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	SCGB1D2	O95969	90 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	LINC00869	P0C866	280 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	RRAS2	P62070	204 aa	Predicted RBP	5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	AMTN	Q6UX39	209 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	PATE2	Q6UY27	113 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	LINC00299	Q6ZSB3	139 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	ZNF767P	Q75MW2	155 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	C1orf158	Q8N1D5	194 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	ZNF431	Q8TF32	576 aa	Predicted RBP	5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	CCDC32	Q9BV29	185 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	RNF126	Q9BV68	326 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	GGACT	Q9BVM4	153 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	C11orf1	Q9H5F2	150 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	DOK5	Q9P104	306 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	HIGD1A	Q9Y241	93 aa		5.17	□□□□□ -1.58
VPS52-221	ENST00000495755	IGHV4-4	A0A075B6R2	117 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	TRAV6	A0A075B6T7	132 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755		A0A087X0K7	114 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	DEFB131B	A0A096LNP1	70 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	TMEM189	A5PLL7	270 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	CCS	O14618	274 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	MRPS12	O15235	138 aa	Known RBP	5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	OR5G3	P0C626	314 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	SPART-AS1	P0CW21	52 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	RPL7	P18124	248 aa	Known RBP	5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	RAP2B	P61225	183 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	SLC38A11	Q08AI6	406 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	ZNF846	Q147U1	533 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	PXDC1	Q5TGL8	231 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	IGFL4	Q6B9Z1	124 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	TEPP	Q6URK8	271 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	RNF182	Q8N6D2	247 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	UHRF2	Q96PU4	802 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	SEC22C	Q9BRL7	303 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	ARL6	Q9H0F7	186 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	NUDT15	Q9NV35	164 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	MGAT4C	Q9UBM8	478 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	RFNG	Q9Y644	331 aa		5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	DYNC1H1	Q14204	4646 aa	Known RBP	5.16	□□□□□ -1.58
VPS52-221	ENST00000495755	PKD1	P98161	4303 aa		5.15	□□□□□ -1.58
VPS52-221	ENST00000495755	IGHV3OR16-12	A0A075B7B8	117 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	FAM25E	A8MYX2	175 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	AGPAT2	O15120	278 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	CRX	O43186	299 aa	Predicted RBP	5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	DUSP14	O95147	198 aa	Known RBP	5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	AMBP	P02760	352 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	H2AFB2	P0C5Z0	115 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	CXCL3	P19876	107 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	CNN1	P51911	297 aa	Known RBP	5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	EMP1	P54849	157 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	FGL1	Q08830	312 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	IL15RA	Q13261	267 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	S100A7A	Q86SG5	101 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	ZNF546	Q86UE3	836 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	C12orf45	Q8N5I9	185 aa	Predicted RBP	5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	TMEM37	Q8WXS4	190 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	C2orf50	Q96LR7	162 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	IGF2BP2-AS1	Q96M15	143 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	MGST2	Q99735	147 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	ARV1	Q9H2C2	271 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	DKK2	Q9UBU2	259 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	GOLT1B	Q9Y3E0	138 aa		5.15	□□□□□ -1.59
VPS52-221	ENST00000495755	PCLO	Q9Y6V0	5065 aa		5.14	□□□□□ -1.59
VPS52-221	ENST00000495755	LOC102723971	A0A1B0GUV8	181 aa		5.14	□□□□□ -1.59
VPS52-221	ENST00000495755	FAM240B	A0A1B0GVZ2	78 aa		5.14	□□□□□ -1.59
VPS52-221	ENST00000495755	C5orf51	A6NDU8	294 aa		5.14	□□□□□ -1.59
VPS52-221	ENST00000495755	FAM24A	A6NFZ4	105 aa		5.14	□□□□□ -1.59
VPS52-221	ENST00000495755		L7N2F9	121 aa		5.14	□□□□□ -1.59
VPS52-221	ENST00000495755	GOSR2	O14653	212 aa		5.14	□□□□□ -1.59
VPS52-221	ENST00000495755	CST7	O76096	145 aa		5.14	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms