RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 TMEM182Q6ZP80 229 aaPredicted RBP15.64■□□□□ 0.09
HDDC3-203ENST00000494993 TOMM5Q8N4H5 51 aa15.64■□□□□ 0.09
HDDC3-203ENST00000494993 OR1B1Q8NGR6 318 aa15.64■□□□□ 0.09
HDDC3-203ENST00000494993 GPR82Q96P67 336 aa15.64■□□□□ 0.09
HDDC3-203ENST00000494993 TMEM208Q9BTX3 173 aa15.64■□□□□ 0.09
HDDC3-203ENST00000494993 SFT2D2O95562 160 aa15.63■□□□□ 0.09
HDDC3-203ENST00000494993 ORM2P19652 201 aa15.63■□□□□ 0.09
HDDC3-203ENST00000494993 SLC25A21Q9BQT8 299 aaPredicted RBP15.63■□□□□ 0.09
HDDC3-203ENST00000494993 TMEM147Q9BVK8 224 aa15.63■□□□□ 0.09
HDDC3-203ENST00000494993 S100A7P31151 101 aa15.62■□□□□ 0.09
HDDC3-203ENST00000494993 AKR1C1Q04828 323 aa15.62■□□□□ 0.09
HDDC3-203ENST00000494993 PPP1R1AQ13522 171 aa15.62■□□□□ 0.09
HDDC3-203ENST00000494993 PYDC2Q56P42 97 aa15.62■□□□□ 0.09
HDDC3-203ENST00000494993 SPANXN5Q5MJ07 72 aa15.62■□□□□ 0.09
HDDC3-203ENST00000494993 OR11H7Q8NGC8 314 aa15.62■□□□□ 0.09
HDDC3-203ENST00000494993 H3BP45 60 aa15.61■□□□□ 0.09
HDDC3-203ENST00000494993 DUSP14O95147 198 aaKnown RBP15.61■□□□□ 0.09
HDDC3-203ENST00000494993 HOXB5P09067 269 aa15.61■□□□□ 0.09
HDDC3-203ENST00000494993 CNN1P51911 297 aaKnown RBP15.61■□□□□ 0.09
HDDC3-203ENST00000494993 SPINK13Q1W4C9 94 aa15.61■□□□□ 0.09
HDDC3-203ENST00000494993 SOHLH1Q5JUK2 328 aa15.61■□□□□ 0.09
HDDC3-203ENST00000494993 M0R2Z0 102 aa15.6■□□□□ 0.09
HDDC3-203ENST00000494993 CRXO43186 299 aaPredicted RBP15.6■□□□□ 0.09
HDDC3-203ENST00000494993 INSP01308 110 aa15.6■□□□□ 0.09
HDDC3-203ENST00000494993 IGFL4Q6B9Z1 124 aa15.6■□□□□ 0.09
HDDC3-203ENST00000494993 ACOT7LQ6ZUV0 252 aa15.6■□□□□ 0.09
HDDC3-203ENST00000494993 DEDD2Q8WXF8 326 aa15.6■□□□□ 0.09
HDDC3-203ENST00000494993 STRAPQ9Y3F4 350 aaKnown RBP15.6■□□□□ 0.09
HDDC3-203ENST00000494993 TRAV8-2A0A0B4J237 113 aa15.59■□□□□ 0.09
HDDC3-203ENST00000494993 ZNF705GA8MUZ8 300 aaPredicted RBP15.59■□□□□ 0.09
HDDC3-203ENST00000494993 H3BRN7 92 aa15.59■□□□□ 0.09
HDDC3-203ENST00000494993 TMEM144Q7Z5S9 345 aa15.59■□□□□ 0.09
HDDC3-203ENST00000494993 RNF182Q8N6D2 247 aa15.59■□□□□ 0.09
HDDC3-203ENST00000494993 C15orf53Q8NAA6 179 aa15.59■□□□□ 0.09
HDDC3-203ENST00000494993 V9GYH0 126 aa15.59■□□□□ 0.09
HDDC3-203ENST00000494993 LYRM9A8MSI8 78 aa15.58■□□□□ 0.08
HDDC3-203ENST00000494993 PRM2P04554 102 aa15.58■□□□□ 0.08
HDDC3-203ENST00000494993 FGL1Q08830 312 aa15.58■□□□□ 0.08
HDDC3-203ENST00000494993 SLC25A39Q9BZJ4 359 aaPredicted RBP15.58■□□□□ 0.08
HDDC3-203ENST00000494993 B2MP61769 119 aa15.57■□□□□ 0.08
HDDC3-203ENST00000494993 C1orf134Q5TEV5 83 aa15.57■□□□□ 0.08
HDDC3-203ENST00000494993 CYP2G1PQ6ZSU1 146 aa15.57■□□□□ 0.08
HDDC3-203ENST00000494993 BAP18Q8IXM2 172 aa15.57■□□□□ 0.08
HDDC3-203ENST00000494993 SHANK2-AS3Q9BTD1 123 aa15.57■□□□□ 0.08
HDDC3-203ENST00000494993 SMCO3A2RU48 225 aa15.56■□□□□ 0.08
HDDC3-203ENST00000494993 IL5P05113 134 aa15.56■□□□□ 0.08
HDDC3-203ENST00000494993 TSPOP30536 169 aa15.56■□□□□ 0.08
HDDC3-203ENST00000494993 FAM3BP58499 235 aaPredicted RBP15.56■□□□□ 0.08
HDDC3-203ENST00000494993 RAP2BP61225 183 aa15.56■□□□□ 0.08
HDDC3-203ENST00000494993 ZNF738Q8NE65 137 aa15.56■□□□□ 0.08
HDDC3-203ENST00000494993 HIGD1AQ9Y241 93 aa15.56■□□□□ 0.08
HDDC3-203ENST00000494993 RPL7P18124 248 aaKnown RBP15.55■□□□□ 0.08
HDDC3-203ENST00000494993 UBE2MP61081 183 aaKnown RBP15.55■□□□□ 0.08
HDDC3-203ENST00000494993 ID3Q02535 119 aa15.55■□□□□ 0.08
HDDC3-203ENST00000494993 TRAV12-2A0A075B6T6 113 aa15.54■□□□□ 0.08
HDDC3-203ENST00000494993 BOLA2-SMG1P6H3BVE0 249 aa15.54■□□□□ 0.08
HDDC3-203ENST00000494993 HYPMO75409 117 aa15.54■□□□□ 0.08
HDDC3-203ENST00000494993 ADAP1O75689 374 aa15.54■□□□□ 0.08
HDDC3-203ENST00000494993 DEFB130BP0DP73 79 aa15.54■□□□□ 0.08
HDDC3-203ENST00000494993 DEFB130AP0DP74 79 aa15.54■□□□□ 0.08
HDDC3-203ENST00000494993 PLP1P60201 277 aa15.54■□□□□ 0.08
HDDC3-203ENST00000494993 POLR2GP62487 172 aaKnown RBP eCLIP15.54■□□□□ 0.08
HDDC3-203ENST00000494993 ZNF575Q86XF7 245 aa15.54■□□□□ 0.08
HDDC3-203ENST00000494993 PSENENQ9NZ42 101 aa15.54■□□□□ 0.08
HDDC3-203ENST00000494993 ABCA13Q86UQ4 5058 aa15.54■□□□□ 0.08
HDDC3-203ENST00000494993 PLAC8L1A1L4L8 177 aa15.53■□□□□ 0.08
HDDC3-203ENST00000494993 PMS2P5A8MQ11 134 aa15.53■□□□□ 0.08
HDDC3-203ENST00000494993 LINC00869P0C866 280 aa15.53■□□□□ 0.08
HDDC3-203ENST00000494993 AZU1P20160 251 aa15.53■□□□□ 0.08
HDDC3-203ENST00000494993 ATG101Q9BSB4 218 aa15.53■□□□□ 0.08
HDDC3-203ENST00000494993 A0A087X0K7 114 aa15.52■□□□□ 0.08
HDDC3-203ENST00000494993 C9orf170A2RU37 121 aa15.52■□□□□ 0.08
HDDC3-203ENST00000494993 OR5G3P0C626 314 aa15.52■□□□□ 0.08
HDDC3-203ENST00000494993 CXCL3P19876 107 aa15.52■□□□□ 0.08
HDDC3-203ENST00000494993 S100A5P33763 92 aa15.52■□□□□ 0.08
HDDC3-203ENST00000494993 SELENOTP62341 195 aa15.52■□□□□ 0.08
HDDC3-203ENST00000494993 HIST1H1AQ02539 215 aaPredicted RBP15.52■□□□□ 0.08
HDDC3-203ENST00000494993 CCDC190Q86UF4 302 aa15.52■□□□□ 0.08
HDDC3-203ENST00000494993 OR8A1Q8NGG7 326 aa15.52■□□□□ 0.08
HDDC3-203ENST00000494993 UHRF2Q96PU4 802 aa15.52■□□□□ 0.08
HDDC3-203ENST00000494993 F5H768 121 aa15.51■□□□□ 0.07
HDDC3-203ENST00000494993 RHOBP62745 196 aa15.51■□□□□ 0.07
HDDC3-203ENST00000494993 FCN2Q15485 313 aa15.51■□□□□ 0.07
HDDC3-203ENST00000494993 PSG3Q16557 428 aa15.51■□□□□ 0.07
HDDC3-203ENST00000494993 TMEM256Q8N2U0 113 aa15.51■□□□□ 0.07
HDDC3-203ENST00000494993 SSSCA1O60232 199 aa15.5■□□□□ 0.07
HDDC3-203ENST00000494993 CCNKO75909 580 aa15.5■□□□□ 0.07
HDDC3-203ENST00000494993 RRAS2P62070 204 aaPredicted RBP15.5■□□□□ 0.07
HDDC3-203ENST00000494993 DLK1P80370 383 aa15.5■□□□□ 0.07
HDDC3-203ENST00000494993 S100A7AQ86SG5 101 aa15.5■□□□□ 0.07
HDDC3-203ENST00000494993 SMIM8Q96KF7 97 aa15.5■□□□□ 0.07
HDDC3-203ENST00000494993 LINC01587Q99440 93 aa15.5■□□□□ 0.07
HDDC3-203ENST00000494993 PPP1R14DQ9NXH3 145 aa15.5■□□□□ 0.07
HDDC3-203ENST00000494993 ATP5G1P05496 136 aa15.49■□□□□ 0.07
HDDC3-203ENST00000494993 ATP5G3P48201 142 aa15.49■□□□□ 0.07
HDDC3-203ENST00000494993 TAS2R60P59551 318 aa15.49■□□□□ 0.07
HDDC3-203ENST00000494993 TMEM14EPQ6UXP3 125 aa15.49■□□□□ 0.07
HDDC3-203ENST00000494993 ZNRF2Q8NHG8 242 aa15.49■□□□□ 0.07
HDDC3-203ENST00000494993 LRRC20Q8TCA0 184 aa15.49■□□□□ 0.07
HDDC3-203ENST00000494993 NPVFQ9HCQ7 196 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms