RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 PIGBOS1A0A0B4J2F0 54 aa8.28□□□□□ -1.08
VTI1A-208ENST00000494728 SMCO3A2RU48 225 aa8.28□□□□□ -1.08
VTI1A-208ENST00000494728 ZNF701M0R085 212 aaPredicted RBP8.28□□□□□ -1.08
VTI1A-208ENST00000494728 OR4E1P0C645 316 aa8.28□□□□□ -1.08
VTI1A-208ENST00000494728 GALR1P47211 349 aa8.28□□□□□ -1.08
VTI1A-208ENST00000494728 RRAS2P62070 204 aaPredicted RBP8.28□□□□□ -1.08
VTI1A-208ENST00000494728 SPANXN2Q5MJ10 180 aa8.28□□□□□ -1.08
VTI1A-208ENST00000494728 BPIFCQ8NFQ6 507 aa8.28□□□□□ -1.08
VTI1A-208ENST00000494728 UHRF2Q96PU4 802 aa8.28□□□□□ -1.08
VTI1A-208ENST00000494728 SLC25A39Q9BZJ4 359 aaPredicted RBP8.28□□□□□ -1.08
VTI1A-208ENST00000494728 PFDN2Q9UHV9 154 aa8.28□□□□□ -1.08
VTI1A-208ENST00000494728 SLC45A2Q9UMX9 530 aa8.28□□□□□ -1.08
VTI1A-208ENST00000494728 RCL1Q9Y2P8 373 aaKnown RBP8.28□□□□□ -1.08
VTI1A-208ENST00000494728 RFNGQ9Y644 331 aa8.28□□□□□ -1.08
VTI1A-208ENST00000494728 LOC102723971A0A1B0GUV8 181 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 M0R2Z0 102 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 CRXO43186 299 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-208ENST00000494728 METTL15P1P0C7V9 234 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 CNN1P51911 297 aaKnown RBP8.27□□□□□ -1.09
VTI1A-208ENST00000494728 ARL16Q0P5N6 197 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 TRIQKQ629K1 86 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 EBLN2Q6P2I7 272 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 TMEM14EPQ6UXP3 125 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 CYP2G1PQ6ZSU1 146 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 TMEM144Q7Z5S9 345 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 BAP18Q8IXM2 172 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 OR11H7Q8NGC8 314 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 SHANK2-AS3Q9BTD1 123 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 TMEM147Q9BVK8 224 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 RPRMQ9NS64 109 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 PSENENQ9NZ42 101 aa8.27□□□□□ -1.09
VTI1A-208ENST00000494728 YTHDF2Q9Y5A9 579 aaKnown RBP8.27□□□□□ -1.09
VTI1A-208ENST00000494728 A0A1B0GVY2 172 aa8.26□□□□□ -1.09
VTI1A-208ENST00000494728 SMIM9A6NGZ8 99 aa8.26□□□□□ -1.09
VTI1A-208ENST00000494728 SCGB1D2O95969 90 aa8.26□□□□□ -1.09
VTI1A-208ENST00000494728 CFDP00746 253 aaPredicted RBP8.26□□□□□ -1.09
VTI1A-208ENST00000494728 LINC00869P0C866 280 aa8.26□□□□□ -1.09
VTI1A-208ENST00000494728 SPART-AS1P0CW21 52 aa8.26□□□□□ -1.09
VTI1A-208ENST00000494728 IL7P13232 177 aa8.26□□□□□ -1.09
VTI1A-208ENST00000494728 MEOX2P50222 304 aa8.26□□□□□ -1.09
VTI1A-208ENST00000494728 RPP30P78346 268 aaKnown RBP8.26□□□□□ -1.09
VTI1A-208ENST00000494728 SLC38A11Q08AI6 406 aa8.26□□□□□ -1.09
VTI1A-208ENST00000494728 SPINK13Q1W4C9 94 aa8.26□□□□□ -1.09
VTI1A-208ENST00000494728 PATE2Q6UY27 113 aa8.26□□□□□ -1.09
VTI1A-208ENST00000494728 NDUFAF3Q9BU61 184 aa8.26□□□□□ -1.09
VTI1A-208ENST00000494728 HSPG2P98160 4391 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 TMEM189A5PLL7 270 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 NAP1L6A6NFF2 107 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 M0R2N4 97 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 CCSO14618 274 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 MRPS12O15235 138 aaKnown RBP8.25□□□□□ -1.09
VTI1A-208ENST00000494728 RTL8CO15255 209 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 IL5P05113 134 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 FGL1Q08830 312 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 SPATA31B1PQ5VZV4 182 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 POM121L12Q8N7R1 296 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 ZBTB8BQ8NAP8 495 aaPredicted RBP8.25□□□□□ -1.09
VTI1A-208ENST00000494728 SMIM8Q96KF7 97 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 IGF2BP2-AS1Q96M15 143 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 C7orf50Q9BRJ6 194 aaKnown RBP8.25□□□□□ -1.09
VTI1A-208ENST00000494728 NIPSNAP3BQ9BS92 247 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 HIGD1AQ9Y241 93 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 GOLT1BQ9Y3E0 138 aa8.25□□□□□ -1.09
VTI1A-208ENST00000494728 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 TRAV12-2A0A075B6T6 113 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 PLAC8L1A1L4L8 177 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 ZNF705GA8MUZ8 300 aaPredicted RBP8.24□□□□□ -1.09
VTI1A-208ENST00000494728 PLA2G10O15496 165 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 HBE1P02100 147 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 MBPP02686 304 aaPredicted RBP8.24□□□□□ -1.09
VTI1A-208ENST00000494728 SNRPCP09234 159 aaKnown RBP8.24□□□□□ -1.09
VTI1A-208ENST00000494728 P0DMU3 169 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 FAM231AP0DMU4 169 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 FAM231CP0DMU5 169 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 HTN3P15516 51 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 PLP1P60201 277 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 DLK1P80370 383 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 RRN3P1Q2M238 152 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 IAH1Q2TAA2 248 aaPredicted RBP8.24□□□□□ -1.09
VTI1A-208ENST00000494728 C4orf46Q504U0 113 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 SAMD13Q5VXD3 122 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 MORN5Q5VZ52 161 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 C20orf85Q9H1P6 137 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 NDUFA13Q9P0J0 144 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 LRP1BQ9NZR2 4599 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 MUC4Q99102 2169 aa8.24□□□□□ -1.09
VTI1A-208ENST00000494728 A0A087X0K7 114 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 C7orf66A4D0T2 115 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 K7EPK0 472 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 HYPMO75409 117 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 OR5G3P0C626 314 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 CXCL3P19876 107 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 AZU1P20160 251 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 INPP1P49441 399 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 TMEM88Q6PEY1 159 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 ZNF738Q8NE65 137 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 MITD1Q8WV92 249 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 GPR82Q96P67 336 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 MGST2Q99735 147 aa8.23□□□□□ -1.09
VTI1A-208ENST00000494728 ARL6Q9H0F7 186 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms