RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 HLA-DRB4X5D2U9 266 aa10.7□□□□□ -0.7
ATG4B-224ENST00000494132 LCE6AA0A183 80 aa10.69□□□□□ -0.7
ATG4B-224ENST00000494132 UBE2L5PA0A1B0GUS4 154 aa10.69□□□□□ -0.7
ATG4B-224ENST00000494132 SNRPCP09234 159 aaKnown RBP10.69□□□□□ -0.7
ATG4B-224ENST00000494132 DEFA1P59665 94 aa10.69□□□□□ -0.7
ATG4B-224ENST00000494132 DEFA3P59666 94 aa10.69□□□□□ -0.7
ATG4B-224ENST00000494132 PLP1P60201 277 aa10.69□□□□□ -0.7
ATG4B-224ENST00000494132 SELENOTP62341 195 aa10.69□□□□□ -0.7
ATG4B-224ENST00000494132 TMEM252Q8N6L7 170 aa10.69□□□□□ -0.7
ATG4B-224ENST00000494132 OR4B1Q8NGF8 309 aa10.69□□□□□ -0.7
ATG4B-224ENST00000494132 ARV1Q9H2C2 271 aa10.69□□□□□ -0.7
ATG4B-224ENST00000494132 SAV1Q9H4B6 383 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-224ENST00000494132 RYR2Q92736 4967 aa10.68□□□□□ -0.7
ATG4B-224ENST00000494132 ISLRO14498 428 aa10.68□□□□□ -0.7
ATG4B-224ENST00000494132 PRAF2O60831 178 aa10.68□□□□□ -0.7
ATG4B-224ENST00000494132 ATF4P18848 351 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-224ENST00000494132 NANOS2P60321 138 aaKnown RBP10.68□□□□□ -0.7
ATG4B-224ENST00000494132 MIC13Q5XKP0 118 aa10.68□□□□□ -0.7
ATG4B-224ENST00000494132 FOXI2Q6ZQN5 318 aa10.68□□□□□ -0.7
ATG4B-224ENST00000494132 ZNF546Q86UE3 836 aa10.68□□□□□ -0.7
ATG4B-224ENST00000494132 RNF182Q8N6D2 247 aa10.68□□□□□ -0.7
ATG4B-224ENST00000494132 MARVELD1Q9BSK0 173 aa10.68□□□□□ -0.7
ATG4B-224ENST00000494132 GGACTQ9BVM4 153 aa10.68□□□□□ -0.7
ATG4B-224ENST00000494132 IGHV4-28A0A0C4DH34 117 aa10.67□□□□□ -0.7
ATG4B-224ENST00000494132 HLA-DMBP28068 263 aa10.67□□□□□ -0.7
ATG4B-224ENST00000494132 CAMLGP49069 296 aa10.67□□□□□ -0.7
ATG4B-224ENST00000494132 SULT1A1P50225 295 aa10.67□□□□□ -0.7
ATG4B-224ENST00000494132 BAXQ07812 192 aa10.67□□□□□ -0.7
ATG4B-224ENST00000494132 Q8NAQ8 132 aa10.67□□□□□ -0.7
ATG4B-224ENST00000494132 CSNK1G2-AS1Q8NCQ2 148 aa10.67□□□□□ -0.7
ATG4B-224ENST00000494132 SLC35B3Q9H1N7 401 aa10.67□□□□□ -0.7
ATG4B-224ENST00000494132 UQCC1Q9NVA1 299 aa10.67□□□□□ -0.7
ATG4B-224ENST00000494132 OR5AC2Q9NZP5 309 aa10.67□□□□□ -0.7
ATG4B-224ENST00000494132 X6R8D5 127 aa10.67□□□□□ -0.7
ATG4B-224ENST00000494132 LYSTQ99698 3801 aa10.67□□□□□ -0.7
ATG4B-224ENST00000494132 TRAV8-2A0A0B4J237 113 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 H0YIZ8 118 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 SSNA1O43805 119 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 ZNF705DP0CH99 300 aaPredicted RBP10.66□□□□□ -0.7
ATG4B-224ENST00000494132 ZNF705BP0CI00 300 aaPredicted RBP10.66□□□□□ -0.7
ATG4B-224ENST00000494132 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
ATG4B-224ENST00000494132 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 MEOX2P50222 304 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 H2BFSP57053 126 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 RBMY1FQ15415 496 aaKnown RBP10.66□□□□□ -0.7
ATG4B-224ENST00000494132 FAM78BQ5VT40 261 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 MORN5Q5VZ52 161 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 LINC00305Q7Z4B0 112 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 STX12Q86Y82 276 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 GPR82Q96P67 336 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 C11orf68Q9H3H3 251 aaKnown RBP10.66□□□□□ -0.7
ATG4B-224ENST00000494132 RPRMQ9NS64 109 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 WDR83OSQ9Y284 106 aa10.66□□□□□ -0.7
ATG4B-224ENST00000494132 PLECQ15149 4684 aaKnown RBP10.66□□□□□ -0.7
ATG4B-224ENST00000494132 IGHV3OR16-12A0A075B7B8 117 aa10.65□□□□□ -0.7
ATG4B-224ENST00000494132 ZNF705EA8MWA4 302 aaPredicted RBP10.65□□□□□ -0.7
ATG4B-224ENST00000494132 H3BTX0 84 aa10.65□□□□□ -0.7
ATG4B-224ENST00000494132 COX7A2P2O60397 106 aa10.65□□□□□ -0.7
ATG4B-224ENST00000494132 RPL7P18124 248 aaKnown RBP10.65□□□□□ -0.7
ATG4B-224ENST00000494132 S100A7P31151 101 aa10.65□□□□□ -0.7
ATG4B-224ENST00000494132 NUTF2P61970 127 aaKnown RBP10.65□□□□□ -0.7
ATG4B-224ENST00000494132 NHLH2Q02577 135 aa10.65□□□□□ -0.7
ATG4B-224ENST00000494132 TMEM41BQ5BJD5 291 aa10.65□□□□□ -0.7
ATG4B-224ENST00000494132 EBLN2Q6P2I7 272 aa10.65□□□□□ -0.7
ATG4B-224ENST00000494132 C11orf45Q8TAV5 145 aa10.65□□□□□ -0.7
ATG4B-224ENST00000494132 TMEM37Q8WXS4 190 aa10.65□□□□□ -0.7
ATG4B-224ENST00000494132 NMES1Q9C002 83 aa10.65□□□□□ -0.7
ATG4B-224ENST00000494132 A0A0J9YX75 114 aa10.64□□□□□ -0.71
ATG4B-224ENST00000494132 MRPS12O15235 138 aaKnown RBP10.64□□□□□ -0.71
ATG4B-224ENST00000494132 FGF7P21781 194 aa10.64□□□□□ -0.71
ATG4B-224ENST00000494132 S100A11P31949 105 aa10.64□□□□□ -0.71
ATG4B-224ENST00000494132 OPCMLQ14982 345 aa10.64□□□□□ -0.71
ATG4B-224ENST00000494132 VWC2Q2TAL6 325 aa10.64□□□□□ -0.71
ATG4B-224ENST00000494132 C10orf113Q5VZT2 155 aa10.64□□□□□ -0.71
ATG4B-224ENST00000494132 ZNF709Q8N972 641 aa10.64□□□□□ -0.71
ATG4B-224ENST00000494132 C1QTNF4Q9BXJ3 329 aa10.64□□□□□ -0.71
ATG4B-224ENST00000494132 ALMS1Q8TCU4 4167 aa10.64□□□□□ -0.71
ATG4B-224ENST00000494132 ELOA3CA0A087WX78 387 aaPredicted RBP10.63□□□□□ -0.71
ATG4B-224ENST00000494132 TRAV5A0A0B4J249 113 aa10.63□□□□□ -0.71
ATG4B-224ENST00000494132 NUPR2A6NF83 97 aa10.63□□□□□ -0.71
ATG4B-224ENST00000494132 HBG1P69891 147 aa10.63□□□□□ -0.71
ATG4B-224ENST00000494132 HBG2P69892 147 aa10.63□□□□□ -0.71
ATG4B-224ENST00000494132 CLINT1Q14677 625 aa10.63□□□□□ -0.71
ATG4B-224ENST00000494132 SAMD13Q5VXD3 122 aa10.63□□□□□ -0.71
ATG4B-224ENST00000494132 CEMP1Q6PRD7 247 aaPredicted RBP10.63□□□□□ -0.71
ATG4B-224ENST00000494132 ZNF738Q8NE65 137 aa10.63□□□□□ -0.71
ATG4B-224ENST00000494132 OR5C1Q8NGR4 320 aa10.63□□□□□ -0.71
ATG4B-224ENST00000494132 THAP6Q8TBB0 222 aa10.63□□□□□ -0.71
ATG4B-224ENST00000494132 LRRC20Q8TCA0 184 aa10.63□□□□□ -0.71
ATG4B-224ENST00000494132 PHLDA1Q8WV24 401 aaPredicted RBP10.63□□□□□ -0.71
ATG4B-224ENST00000494132 PPP1R1CQ8WVI7 109 aa10.63□□□□□ -0.71
ATG4B-224ENST00000494132 HYDINQ4G0P3 5121 aa10.63□□□□□ -0.71
ATG4B-224ENST00000494132 E5RGE8 158 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 JTBO76095 146 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 RLN2P04090 185 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 MIFP14174 115 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 B2MP61769 119 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 PRR20EP86478 221 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 PRR20CP86479 221 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 PRR20DP86480 221 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms