RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 OR4F17Q8NGA8 305 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 LINC00479Q96M42 142 aa8.29□□□□□ -1.08
CLCN6-208ENST00000494028 TRAV9-1A0A075B6T8 112 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 ZNF98A6NK75 572 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 TCRAP04437 139 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 CTSGP08311 255 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 TRGC1P0CF51 173 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 MGST1P10620 155 aaKnown RBP8.28□□□□□ -1.08
CLCN6-208ENST00000494028 RPL15P61313 204 aaKnown RBP8.28□□□□□ -1.08
CLCN6-208ENST00000494028 FABP9Q0Z7S8 132 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 Q5PR19 223 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 EEF1AKMT3Q96AZ1 226 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 SMIM12Q96EX1 92 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 BTF3L4Q96K17 158 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 RNASE7Q9H1E1 156 aaKnown RBP8.28□□□□□ -1.08
CLCN6-208ENST00000494028 KLF12Q9Y4X4 402 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 UNC79Q9P2D8 2635 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 SPG11Q96JI7 2443 aa8.28□□□□□ -1.08
CLCN6-208ENST00000494028 ZNF320A2RRD8 509 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 RNF223E7ERA6 249 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 IGF1P05019 195 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 AKR1D1P51857 326 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 ERVFC1-1P60608 527 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 UBE2G1P62253 170 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 FOXL1Q12952 345 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 RPEL1Q2QD12 228 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 FAM231DQ6ZW35 169 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 EXOC3-AS1Q8N2X6 119 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 MAPK1IP1LQ8NDC0 245 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 MBD6Q96DN6 1003 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 FMC1Q96HJ9 113 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 CENPEQ02224 2701 aa8.27□□□□□ -1.09
CLCN6-208ENST00000494028 BAHCC1Q9P281 2608 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 TRBV6-1A0A0K0K1D8 114 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 FAM223BA6NKX1 122 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 M0QZK8 103 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 LTAP01374 205 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 IGHG2P01859 326 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 PDE6HQ13956 83 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 DEFB112Q30KQ8 113 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 C9orf152Q5JTZ5 239 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 IBA57Q5T440 356 aaKnown RBP8.26□□□□□ -1.09
CLCN6-208ENST00000494028 Q71RC1 249 aaPredicted RBP8.26□□□□□ -1.09
CLCN6-208ENST00000494028 S100A7AQ86SG5 101 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 BAGE2Q86Y30 109 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 FAM223AQ8IWN6 122 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 C17orf77Q96MU5 243 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 ATP6V0BQ99437 205 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 GAR1Q9NY12 217 aaKnown RBP8.26□□□□□ -1.09
CLCN6-208ENST00000494028 RABAC1Q9UI14 185 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 CRYBG3Q68DQ2 2970 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 CELSR2Q9HCU4 2923 aa8.26□□□□□ -1.09
CLCN6-208ENST00000494028 TRBV7-1A0A0A6YYK4 115 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 IFITM10A6NMD0 228 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 H3BUA1 57 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 BMPR1BO00238 502 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 BRI3O95415 125 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 IGLV2-11P01706 119 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 S100A9P06702 114 aaKnown RBP8.25□□□□□ -1.09
CLCN6-208ENST00000494028 HOXA5P20719 270 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 PPIFP30405 207 aaKnown RBP8.25□□□□□ -1.09
CLCN6-208ENST00000494028 NDUFA6P56556 154 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 TOMM20LQ6UXN7 152 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 CLEC19AQ6UXS0 136 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 GOLT1AQ6ZVE7 132 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 LINC00518Q8N0U6 118 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 LYPD1Q8N2G4 141 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 MS4A10Q96PG2 267 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 MLST8Q9BVC4 326 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 ZNF492Q9P255 531 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 LINC00527Q9UJ94 153 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 ZNF580Q9UK33 172 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 PITPNC1Q9UKF7 332 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 RNF24Q9Y225 148 aa8.25□□□□□ -1.09
CLCN6-208ENST00000494028 ABCA12Q86UK0 2595 aa8.24□□□□□ -1.09
CLCN6-208ENST00000494028 ASH1LQ9NR48 2969 aaKnown RBP8.24□□□□□ -1.09
CLCN6-208ENST00000494028 TRAV8-1A0A0A6YYK1 113 aa8.24□□□□□ -1.09
CLCN6-208ENST00000494028 IGHV3-35A0A0C4DH35 117 aa8.24□□□□□ -1.09
CLCN6-208ENST00000494028 CLPSL1A2RUU4 121 aa8.24□□□□□ -1.09
CLCN6-208ENST00000494028 RPL7P18124 248 aaKnown RBP8.24□□□□□ -1.09
CLCN6-208ENST00000494028 CFHR3Q02985 330 aa8.24□□□□□ -1.09
CLCN6-208ENST00000494028 OR8I2Q8N0Y5 310 aa8.24□□□□□ -1.09
CLCN6-208ENST00000494028 HIST3H2BBQ8N257 126 aa8.24□□□□□ -1.09
CLCN6-208ENST00000494028 TMEM75Q8N9X5 138 aa8.24□□□□□ -1.09
CLCN6-208ENST00000494028 CMTM2Q8TAZ6 248 aa8.24□□□□□ -1.09
CLCN6-208ENST00000494028 SGK494Q96LW2 274 aa8.24□□□□□ -1.09
CLCN6-208ENST00000494028 NOL4LQ96MY1 436 aaPredicted RBP8.24□□□□□ -1.09
CLCN6-208ENST00000494028 GPR82Q96P67 336 aa8.24□□□□□ -1.09
CLCN6-208ENST00000494028 GNB4Q9HAV0 340 aa8.24□□□□□ -1.09
CLCN6-208ENST00000494028 IGHV3OR16-8A0A075B7F1 116 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 A0A087X0K7 114 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 SMIM27A0A1W2PRY6 76 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 C19orf71A6NCJ1 209 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 ZNF705GA8MUZ8 300 aaPredicted RBP8.23□□□□□ -1.09
CLCN6-208ENST00000494028 M0R3E3 92 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 GATCO43716 136 aaKnown RBP8.23□□□□□ -1.09
CLCN6-208ENST00000494028 ZNF253O75346 499 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 CA1P00915 261 aaPredicted RBP8.23□□□□□ -1.09
CLCN6-208ENST00000494028 TGFAP01135 160 aa8.23□□□□□ -1.09
CLCN6-208ENST00000494028 IGHV4-59P01825 116 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms