RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 ABCA4P78363 2273 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 TRBV20OR9-2A0A075B6H5 130 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 A0A1W2PRD5 423 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 A0A1W2PRF3 423 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 A0A1W2PRM7 423 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 I3L2K1 104 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 AP4M1O00189 453 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 NDUFA3O95167 84 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 MT-CO2P00403 227 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 APELAP0DMC3 54 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 CD24P25063 80 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 EBI3Q14213 229 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 Q5PR19 223 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 OR4X1Q8NH49 305 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 SRSF12Q8WXF0 261 aaKnown RBP4.73□□□□□ -1.65
CPSF7-213ENST00000494016 RNF2Q99496 336 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 TRGV9Q99603 122 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 SPAG8Q99932 426 aaPredicted RBP4.73□□□□□ -1.65
CPSF7-213ENST00000494016 ELOVL1Q9BW60 279 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 MRPL32Q9BYC8 188 aaKnown RBP4.73□□□□□ -1.65
CPSF7-213ENST00000494016 TMEM167BQ9NRX6 74 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 PEF1Q9UBV8 284 aaKnown RBP4.73□□□□□ -1.65
CPSF7-213ENST00000494016 ARL2-SNX15V9GYD0 113 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 NAV3Q8IVL0 2385 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 ABCA2Q9BZC7 2435 aa4.73□□□□□ -1.65
CPSF7-213ENST00000494016 MAP1AP78559 2803 aaPredicted RBP4.73□□□□□ -1.65
CPSF7-213ENST00000494016 CCDC168Q8NDH2 2452 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 IGHV3-21A0A0B4J1V1 117 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 IGHV2-70DA0A0C4DH43 119 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 A0A1W2PRE2 83 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 OOSP1A8MZH6 123 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 NBR2O15453 112 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 COX7A2P2O60397 106 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 GGCTO75223 188 aaKnown RBP4.72□□□□□ -1.65
CPSF7-213ENST00000494016 MOSP00540 346 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 TRGC2P03986 189 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 CD99P14209 185 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 CRYBB3P26998 211 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 CEACAM3P40198 252 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 RPL35P42766 123 aaKnown RBP4.72□□□□□ -1.65
CPSF7-213ENST00000494016 GALR1P47211 349 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 PLP1P60201 277 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 SSTP61278 116 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 SELENOTP62341 195 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 LCN2P80188 198 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 FXYD3Q14802 87 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 MINOS1Q5TGZ0 78 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 C10orf113Q5VZT2 155 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 PQLC2Q6ZP29 291 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 NECAP1Q8NC96 275 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 OR5T1Q8NG75 326 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 OR1L4Q8NGR5 311 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 FRZBQ92765 325 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 FXYD5Q96DB9 178 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 UHRF2Q96PU4 802 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 TBX15Q96SF7 602 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 TNFRSF19Q9NS68 423 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 C11orf21Q9P2W6 132 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 LY96Q9Y6Y9 160 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 MINOS1-NBL1R4GNA1 71 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 ZNF469Q96JG9 3925 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-213ENST00000494016 VPS13CQ709C8 3753 aa4.72□□□□□ -1.65
CPSF7-213ENST00000494016 ANKHD1Q8IWZ3 2542 aaKnown RBP4.72□□□□□ -1.65
CPSF7-213ENST00000494016 SPG11Q96JI7 2443 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 IFITM10A6NMD0 228 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 GGTLC3B5MD39 225 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 C9JCJ5 164 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 H7BYZ3 331 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 K7EIM0 57 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 K7EN84 100 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 TGOLN2O43493 480 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 CNIH1O95406 144 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 IGLV2-8P01709 118 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 IGHV4-39P01824 125 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 OR10J4P0C629 311 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 TRGC1P0CF51 173 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 PYYP10082 97 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 SRP14P37108 136 aaKnown RBP4.71□□□□□ -1.66
CPSF7-213ENST00000494016 MYCNOSP40205 109 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 UBE2E1P51965 193 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 NDUFA6P56556 154 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 TAS2R45P59539 299 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 KRTAP10-9P60411 292 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 FABP9Q0Z7S8 132 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 CLEC12BQ2HXU8 276 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 C5orf64Q2M2E5 130 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 FAM120AOSQ5T036 256 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 ASPHD1Q5U4P2 390 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 OR5AU1Q8NGC0 362 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 OR2T10Q8NGZ9 312 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 TMEM68Q96MH6 324 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 IMMP2LQ96T52 175 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 PFDN5Q99471 154 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 PAXXQ9BUH6 204 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 BPESC1Q9GZL8 116 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 OR51M1Q9H341 326 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 ZNF355PQ9NSJ1 428 aa4.71□□□□□ -1.66
CPSF7-213ENST00000494016 ZNF98A6NK75 572 aa4.7□□□□□ -1.66
CPSF7-213ENST00000494016 CORTO00230 105 aa4.7□□□□□ -1.66
CPSF7-213ENST00000494016 PPP1R2P9O14990 202 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms