RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 RAB2AP61019 212 aa11.31□□□□□ -0.6
ACTB-213ENST00000493945 FAM122CQ6P4D5 195 aa11.31□□□□□ -0.6
ACTB-213ENST00000493945 PQLC2Q6ZP29 291 aa11.31□□□□□ -0.6
ACTB-213ENST00000493945 TMEM37Q8WXS4 190 aa11.31□□□□□ -0.6
ACTB-213ENST00000493945 UHRF2Q96PU4 802 aa11.31□□□□□ -0.6
ACTB-213ENST00000493945 SCRT1Q9BWW7 348 aa11.31□□□□□ -0.6
ACTB-213ENST00000493945 ANK2Q01484 3957 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 IGHV3OR16-13A0A075B7E8 117 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 IGHV3-74A0A0B4J1X5 117 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 TRAV2A0A0B4J234 112 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 IGHV3-66A0A0C4DH42 116 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 ZNF785A8K8V0 405 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 TSPAN4O14817 238 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 OR7C2O60412 319 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 IGLL1P15814 213 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
ACTB-213ENST00000493945 GUK1Q16774 197 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 DEFB114Q30KQ6 69 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 IL34Q6ZMJ4 242 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 GTSCR1Q86UQ5 136 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 TMED6Q8WW62 240 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 GLMPQ8WWB7 406 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 MLXQ9UH92 298 aa11.3□□□□□ -0.6
ACTB-213ENST00000493945 CTXND1A0A1B0GTU2 59 aa11.29□□□□□ -0.6
ACTB-213ENST00000493945 ID1P41134 155 aa11.29□□□□□ -0.6
ACTB-213ENST00000493945 GUCA2BQ16661 112 aa11.29□□□□□ -0.6
ACTB-213ENST00000493945 CD300EQ496F6 205 aaPredicted RBP11.29□□□□□ -0.6
ACTB-213ENST00000493945 PATE2Q6UY27 113 aa11.29□□□□□ -0.6
ACTB-213ENST00000493945 LRRC20Q8TCA0 184 aa11.29□□□□□ -0.6
ACTB-213ENST00000493945 ZNF414Q96IQ9 312 aa11.29□□□□□ -0.6
ACTB-213ENST00000493945 NRN1Q9NPD7 142 aa11.29□□□□□ -0.6
ACTB-213ENST00000493945 CLEC5AQ9NY25 188 aa11.29□□□□□ -0.6
ACTB-213ENST00000493945 TMEM14CQ9P0S9 112 aa11.29□□□□□ -0.6
ACTB-213ENST00000493945 IFNA7P01567 189 aa11.28□□□□□ -0.6
ACTB-213ENST00000493945 SNRPD3P62318 126 aaKnown RBP11.28□□□□□ -0.6
ACTB-213ENST00000493945 LCN15Q6UWW0 184 aa11.28□□□□□ -0.6
ACTB-213ENST00000493945 TMEM61Q8N0U2 210 aa11.28□□□□□ -0.6
ACTB-213ENST00000493945 RNF141Q8WVD5 230 aa11.28□□□□□ -0.6
ACTB-213ENST00000493945 SLC50A1Q9BRV3 221 aa11.28□□□□□ -0.6
ACTB-213ENST00000493945 SEPSECSQ9HD40 501 aaKnown RBP11.28□□□□□ -0.6
ACTB-213ENST00000493945 CXorf1O96002 111 aa11.27□□□□□ -0.61
ACTB-213ENST00000493945 APOHP02749 345 aaPredicted RBP11.27□□□□□ -0.61
ACTB-213ENST00000493945 UBE2L3P68036 154 aaKnown RBP11.27□□□□□ -0.61
ACTB-213ENST00000493945 PDE6HQ13956 83 aa11.27□□□□□ -0.61
ACTB-213ENST00000493945 GCSAMLQ5JQS6 135 aa11.27□□□□□ -0.61
ACTB-213ENST00000493945 FAM213BQ8TBF2 198 aa11.27□□□□□ -0.61
ACTB-213ENST00000493945 PAXXQ9BUH6 204 aa11.27□□□□□ -0.61
ACTB-213ENST00000493945 OR51M1Q9H341 326 aa11.27□□□□□ -0.61
ACTB-213ENST00000493945 TMEM167BQ9NRX6 74 aa11.27□□□□□ -0.61
ACTB-213ENST00000493945 RPRMQ9NS64 109 aa11.27□□□□□ -0.61
ACTB-213ENST00000493945 NOTCH3Q9UM47 2321 aa11.26□□□□□ -0.61
ACTB-213ENST00000493945 A0A087X0K7 114 aa11.26□□□□□ -0.61
ACTB-213ENST00000493945 HBE1P02100 147 aa11.26□□□□□ -0.61
ACTB-213ENST00000493945 HIST1H1EP10412 219 aaKnown RBP11.26□□□□□ -0.61
ACTB-213ENST00000493945 SULT1A2P50226 295 aa11.26□□□□□ -0.61
ACTB-213ENST00000493945 LEMD1Q68G75 181 aa11.26□□□□□ -0.61
ACTB-213ENST00000493945 MIR17HGQ75NE6 70 aa11.26□□□□□ -0.61
ACTB-213ENST00000493945 RAB24Q969Q5 203 aa11.26□□□□□ -0.61
ACTB-213ENST00000493945 HRH4Q9H3N8 390 aa11.26□□□□□ -0.61
ACTB-213ENST00000493945 ZNF256Q9Y2P7 627 aaPredicted RBP11.26□□□□□ -0.61
ACTB-213ENST00000493945 IGKV3-7A0A075B6H7 116 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 MAP1LC3B2A6NCE7 125 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 ZNF253O75346 499 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 STAG3L2P0CL84 134 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 STAG3L3P0CL85 134 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 GP9P14770 177 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 PPT1P50897 306 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 BLOC1S1P78537 153 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 PSG9Q00887 426 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 FAM74A1Q5RGS3 127 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 FAM90A2PQ658T7 463 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 ADAMTSL5Q6ZMM2 481 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 IQCF2Q8IXL9 164 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 RPP25LQ8N5L8 163 aaKnown RBP11.25□□□□□ -0.61
ACTB-213ENST00000493945 C16orf92Q96LL3 132 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 SLC25A2Q9BXI2 301 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 MAP1LC3BQ9GZQ8 125 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 MS4A6AQ9H2W1 248 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 AAMDCQ9H7C9 122 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 SORL1Q92673 2214 aa11.25□□□□□ -0.61
ACTB-213ENST00000493945 ISLRO14498 428 aa11.24□□□□□ -0.61
ACTB-213ENST00000493945 H2AFB1P0C5Y9 115 aa11.24□□□□□ -0.61
ACTB-213ENST00000493945 EDN2P20800 178 aa11.24□□□□□ -0.61
ACTB-213ENST00000493945 PSMB3P49720 205 aa11.24□□□□□ -0.61
ACTB-213ENST00000493945 OXLD1Q5BKU9 147 aa11.24□□□□□ -0.61
ACTB-213ENST00000493945 SAMD5Q5TGI4 173 aa11.24□□□□□ -0.61
ACTB-213ENST00000493945 ALKAL2Q6UX46 152 aa11.24□□□□□ -0.61
ACTB-213ENST00000493945 BOLA1Q9Y3E2 137 aa11.24□□□□□ -0.61
ACTB-213ENST00000493945 ZNF705EA8MWA4 302 aaPredicted RBP11.23□□□□□ -0.61
ACTB-213ENST00000493945 ARL14EPLP0DKL9 152 aa11.23□□□□□ -0.61
ACTB-213ENST00000493945 EGFEM1PQ0D2K5 195 aa11.23□□□□□ -0.61
ACTB-213ENST00000493945 GBGT1Q8N5D6 347 aa11.23□□□□□ -0.61
ACTB-213ENST00000493945 FAM110AQ9BQ89 295 aa11.23□□□□□ -0.61
ACTB-213ENST00000493945 UBQLN2Q9UHD9 624 aa11.23□□□□□ -0.61
ACTB-213ENST00000493945 RFNGQ9Y644 331 aa11.23□□□□□ -0.61
ACTB-213ENST00000493945 TRAV5A0A0B4J249 113 aa11.22□□□□□ -0.61
ACTB-213ENST00000493945 OR11H12B2RN74 326 aa11.22□□□□□ -0.61
ACTB-213ENST00000493945 NBEAP1P0C6P0 100 aa11.22□□□□□ -0.61
ACTB-213ENST00000493945 IGLC2P0DOY2 106 aa11.22□□□□□ -0.61
ACTB-213ENST00000493945 TFPI2P48307 235 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms