RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 ZNF98A6NK75 572 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 G3V3Q6 166 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 BOLA2-SMG1P6H3BVE0 249 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 IGKV1-17P01599 117 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 NBEAP1P0C6P0 100 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 HIST1H1EP10412 219 aaKnown RBP4.1□□□□□ -1.75
NEK4-205ENST00000493199 CBLN1P23435 193 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 ADMP35318 185 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 NKX2-5P52952 324 aaPredicted RBP4.1□□□□□ -1.75
NEK4-205ENST00000493199 TCTEX1D4Q5JR98 221 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 PRR31Q5SQ13 230 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 SPATA31B1PQ5VZV4 182 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 ALKAL2Q6UX46 152 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 GTSCR1Q86UQ5 136 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 HAPLN4Q86UW8 402 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 ARL6IP6Q8N6S5 226 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 ZNF680Q8NEM1 530 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 WIPF2Q8TF74 440 aaPredicted RBP4.1□□□□□ -1.75
NEK4-205ENST00000493199 SHANK2-AS3Q9BTD1 123 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 CHRDL1Q9BU40 450 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 PAXXQ9BUH6 204 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 RHPN1-AS1Q9BWJ2 59 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 MAP1LC3BQ9GZQ8 125 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 CYTL1Q9NRR1 136 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 PPP1R14DQ9NXH3 145 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 TMEM14CQ9P0S9 112 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 DOK5Q9P104 306 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 SMPXQ9UHP9 88 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 DMRT1Q9Y5R6 373 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 ARL2-SNX15V9GYD0 113 aa4.1□□□□□ -1.75
NEK4-205ENST00000493199 TET2Q6N021 2002 aaPredicted RBP4.1□□□□□ -1.75
NEK4-205ENST00000493199 IGKV1OR2-108A0A075B7D4 117 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 TRAV1-1A0A0B4J248 108 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 IGHV3-35A0A0C4DH35 117 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 C2orf70A6NJV1 201 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 SEC14L6B5MCN3 397 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 H3BRN7 92 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 BUB3O43684 328 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 ZNF253O75346 499 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 S100A9P06702 114 aaKnown RBP4.09□□□□□ -1.75
NEK4-205ENST00000493199 STAG3L2P0CL84 134 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 STAG3L3P0CL85 134 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 FOLR2P14207 255 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 GATA2P23769 480 aaPredicted RBP4.09□□□□□ -1.75
NEK4-205ENST00000493199 NUTF2P61970 127 aaKnown RBP4.09□□□□□ -1.75
NEK4-205ENST00000493199 UBE2L3P68036 154 aaKnown RBP4.09□□□□□ -1.75
NEK4-205ENST00000493199 FHL3Q13643 280 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 KIAA0141Q14154 515 aaPredicted RBP4.09□□□□□ -1.75
NEK4-205ENST00000493199 PEA15Q15121 130 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 EBLN2Q6P2I7 272 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 C19orf35Q6ZS72 473 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 MBD3L1Q8WWY6 194 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 RAB24Q969Q5 203 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 RAX2Q96IS3 184 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 C16orf92Q96LL3 132 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 SPAG8Q99932 426 aaPredicted RBP4.09□□□□□ -1.75
NEK4-205ENST00000493199 EIF5A2Q9GZV4 153 aaKnown RBP4.09□□□□□ -1.75
NEK4-205ENST00000493199 HRH4Q9H3N8 390 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 WFDC1Q9HC57 220 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 NRN1Q9NPD7 142 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 BIN3Q9NQY0 253 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 RPRMQ9NS64 109 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 MLXQ9UH92 298 aa4.09□□□□□ -1.75
NEK4-205ENST00000493199 PLXNB1O43157 2135 aa4.09□□□□□ -1.76
NEK4-205ENST00000493199 IGKV1D-37A0A075B6S9 117 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 A0A1W2PRE2 83 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 ISLRO14498 428 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 LCE2BO14633 110 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 CHEK1O14757 476 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 TSPAN4O14817 238 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 PDE6DO43924 150 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 NDUFS6O75380 124 aaKnown RBP4.08□□□□□ -1.76
NEK4-205ENST00000493199 DUSP14O95147 198 aaKnown RBP4.08□□□□□ -1.76
NEK4-205ENST00000493199 FHITP49789 147 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 SLURP1P55000 103 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 UBE2G1P62253 170 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 CD300CQ08708 224 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 PMS2P11Q13670 270 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 GUCA2BQ16661 112 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 TM4SF20Q53R12 229 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 CST9LP1Q5W188 147 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 C16orf54Q6UWD8 224 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 C10orf99Q6UWK7 81 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 TCF24Q7RTU0 167 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 RPP25LQ8N5L8 163 aaKnown RBP4.08□□□□□ -1.76
NEK4-205ENST00000493199 WFDC9Q8NEX5 89 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 TMEM37Q8WXS4 190 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 DLX4Q92988 240 aaPredicted RBP4.08□□□□□ -1.76
NEK4-205ENST00000493199 HIST1H2BAQ96A08 127 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 NDFIP1Q9BT67 221 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 SH3BGRL3Q9H299 93 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 VSIRQ9H7M9 311 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 ZFAND3Q9H8U3 227 aa4.08□□□□□ -1.76
NEK4-205ENST00000493199 A0A087X0K7 114 aa4.07□□□□□ -1.76
NEK4-205ENST00000493199 RAB19A4D1S5 217 aa4.07□□□□□ -1.76
NEK4-205ENST00000493199 F8W735 103 aaPredicted RBP4.07□□□□□ -1.76
NEK4-205ENST00000493199 TRBV12-3P01733 135 aa4.07□□□□□ -1.76
NEK4-205ENST00000493199 ARL14EPLP0DKL9 152 aa4.07□□□□□ -1.76
NEK4-205ENST00000493199 TSPOP30536 169 aa4.07□□□□□ -1.76
NEK4-205ENST00000493199 DEFA5Q01523 94 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms