RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 CITED4Q96RK1 184 aa11.83□□□□□ -0.52
COPS3-210ENST00000492672 PARD6GQ9BYG4 376 aaPredicted RBP11.83□□□□□ -0.52
COPS3-210ENST00000492672 DNASE2O00115 360 aaPredicted RBP11.82□□□□□ -0.52
COPS3-210ENST00000492672 MRPS12O15235 138 aaKnown RBP11.82□□□□□ -0.52
COPS3-210ENST00000492672 C1QBP02746 253 aa11.82□□□□□ -0.52
COPS3-210ENST00000492672 PRB4P10163 310 aaPredicted RBP11.82□□□□□ -0.52
COPS3-210ENST00000492672 BMI1P35226 326 aa11.82□□□□□ -0.52
COPS3-210ENST00000492672 PXDC1Q5TGL8 231 aa11.82□□□□□ -0.52
COPS3-210ENST00000492672 MRAPQ8TCY5 172 aa11.82□□□□□ -0.52
COPS3-210ENST00000492672 SEPSECSQ9HD40 501 aaKnown RBP11.82□□□□□ -0.52
COPS3-210ENST00000492672 PRKDCP78527 4128 aaKnown RBP11.82□□□□□ -0.52
COPS3-210ENST00000492672 HELTA6NFD8 242 aa11.81□□□□□ -0.52
COPS3-210ENST00000492672 H3BTX0 84 aa11.81□□□□□ -0.52
COPS3-210ENST00000492672 DEFB1P60022 68 aa11.81□□□□□ -0.52
COPS3-210ENST00000492672 RAB2AP61019 212 aa11.81□□□□□ -0.52
COPS3-210ENST00000492672 C1orf194Q5T5A4 169 aa11.81□□□□□ -0.52
COPS3-210ENST00000492672 IGFL4Q6B9Z1 124 aa11.81□□□□□ -0.52
COPS3-210ENST00000492672 TMUB2Q71RG4 321 aa11.81□□□□□ -0.52
COPS3-210ENST00000492672 MIR17HGQ75NE6 70 aa11.81□□□□□ -0.52
COPS3-210ENST00000492672 APRG1Q8IVJ8 170 aa11.81□□□□□ -0.52
COPS3-210ENST00000492672 PLA2G2EQ9NZK7 142 aa11.81□□□□□ -0.52
COPS3-210ENST00000492672 ZMAT5Q9UDW3 170 aaKnown RBP11.81□□□□□ -0.52
COPS3-210ENST00000492672 ELOA3CA0A087WX78 387 aaPredicted RBP11.8□□□□□ -0.52
COPS3-210ENST00000492672 OR4C46A6NHA9 309 aa11.8□□□□□ -0.52
COPS3-210ENST00000492672 OR11H12B2RN74 326 aa11.8□□□□□ -0.52
COPS3-210ENST00000492672 C17orf112F2Z3M2 114 aa11.8□□□□□ -0.52
COPS3-210ENST00000492672 ZNF345Q14585 488 aa11.8□□□□□ -0.52
COPS3-210ENST00000492672 FAM78BQ5VT40 261 aa11.8□□□□□ -0.52
COPS3-210ENST00000492672 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.8□□□□□ -0.52
COPS3-210ENST00000492672 GTSCR1Q86UQ5 136 aa11.8□□□□□ -0.52
COPS3-210ENST00000492672 OR1L4Q8NGR5 311 aa11.8□□□□□ -0.52
COPS3-210ENST00000492672 MAP6D1Q9H9H5 199 aa11.8□□□□□ -0.52
COPS3-210ENST00000492672 CD5P06127 495 aa11.79□□□□□ -0.52
COPS3-210ENST00000492672 ZNF688P0C7X2 276 aa11.79□□□□□ -0.52
COPS3-210ENST00000492672 NKX2-5P52952 324 aaPredicted RBP11.79□□□□□ -0.52
COPS3-210ENST00000492672 PAFAH1B2P68402 229 aa11.79□□□□□ -0.52
COPS3-210ENST00000492672 ZNF266Q14584 549 aa11.79□□□□□ -0.52
COPS3-210ENST00000492672 GATAD1Q8WUU5 269 aa11.79□□□□□ -0.52
COPS3-210ENST00000492672 FAM167A-AS1Q96KT0 104 aa11.79□□□□□ -0.52
COPS3-210ENST00000492672 PFDN5Q99471 154 aa11.79□□□□□ -0.52
COPS3-210ENST00000492672 ARPC5LQ9BPX5 153 aa11.79□□□□□ -0.52
COPS3-210ENST00000492672 NRN1Q9NPD7 142 aa11.79□□□□□ -0.52
COPS3-210ENST00000492672 PFDN2Q9UHV9 154 aa11.79□□□□□ -0.52
COPS3-210ENST00000492672 TIMM9Q9Y5J7 89 aa11.79□□□□□ -0.52
COPS3-210ENST00000492672 BORCS7-ASMTA0A0B4J1R7 106 aa11.78□□□□□ -0.52
COPS3-210ENST00000492672 A0A0D9SG52 128 aa11.78□□□□□ -0.52
COPS3-210ENST00000492672 H3BQ15 152 aa11.78□□□□□ -0.52
COPS3-210ENST00000492672 SOCS3O14543 225 aa11.78□□□□□ -0.52
COPS3-210ENST00000492672 IGHV4-30-4P0DP06 118 aa11.78□□□□□ -0.52
COPS3-210ENST00000492672 HLA-DMBP28068 263 aa11.78□□□□□ -0.52
COPS3-210ENST00000492672 DEFB131AP59861 70 aa11.78□□□□□ -0.52
COPS3-210ENST00000492672 C20orf173Q96LM9 149 aa11.78□□□□□ -0.52
COPS3-210ENST00000492672 SLC25A2Q9BXI2 301 aa11.78□□□□□ -0.52
COPS3-210ENST00000492672 TRAV8-2A0A0B4J237 113 aa11.77□□□□□ -0.53
COPS3-210ENST00000492672 RBMY1BA6NDE4 496 aaKnown RBP11.77□□□□□ -0.53
COPS3-210ENST00000492672 RBMY1EA6NEQ0 496 aaKnown RBP11.77□□□□□ -0.53
COPS3-210ENST00000492672 TAAR5O14804 337 aa11.77□□□□□ -0.53
COPS3-210ENST00000492672 HMGB3O15347 200 aaKnown RBP11.77□□□□□ -0.53
COPS3-210ENST00000492672 BCL2L11O43521 198 aa11.77□□□□□ -0.53
COPS3-210ENST00000492672 RBMY1DP0C7P1 496 aaKnown RBP11.77□□□□□ -0.53
COPS3-210ENST00000492672 PYYP10082 97 aa11.77□□□□□ -0.53
COPS3-210ENST00000492672 GALR1P47211 349 aa11.77□□□□□ -0.53
COPS3-210ENST00000492672 ZNF503Q96F45 646 aa11.77□□□□□ -0.53
COPS3-210ENST00000492672 SRD5A3Q9H8P0 318 aa11.77□□□□□ -0.53
COPS3-210ENST00000492672 TRAV2A0A0B4J234 112 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 SLC17A3O00476 420 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 FRMD6-AS1P0C7T7 363 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 RPL7P18124 248 aaKnown RBP11.76□□□□□ -0.53
COPS3-210ENST00000492672 FAM122CQ6P4D5 195 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 SSX7Q7RTT5 188 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 C9orf62Q8N4C0 152 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 RPP25LQ8N5L8 163 aaKnown RBP11.76□□□□□ -0.53
COPS3-210ENST00000492672 RNF182Q8N6D2 247 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 OR2G3Q8NGZ4 309 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 HYLS1Q96M11 299 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 ASCL2Q99929 193 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 PSMG3Q9BT73 122 aaPredicted RBP11.76□□□□□ -0.53
COPS3-210ENST00000492672 ZNF471Q9BX82 626 aaPredicted RBP11.76□□□□□ -0.53
COPS3-210ENST00000492672 KCNIP2Q9NS61 270 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 ZNF586Q9NXT0 402 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 FUT9Q9Y231 359 aa11.76□□□□□ -0.53
COPS3-210ENST00000492672 KNCNA6PVL3 124 aa11.75□□□□□ -0.53
COPS3-210ENST00000492672 JTBO76095 146 aa11.75□□□□□ -0.53
COPS3-210ENST00000492672 IGLC2P0DOY2 106 aa11.75□□□□□ -0.53
COPS3-210ENST00000492672 ATF4P18848 351 aaPredicted RBP11.75□□□□□ -0.53
COPS3-210ENST00000492672 ZFP69Q49AA0 526 aa11.75□□□□□ -0.53
COPS3-210ENST00000492672 PSMG4Q5JS54 123 aa11.75□□□□□ -0.53
COPS3-210ENST00000492672 OR10G4Q8NGN3 311 aa11.75□□□□□ -0.53
COPS3-210ENST00000492672 OR10G9Q8NGN4 311 aa11.75□□□□□ -0.53
COPS3-210ENST00000492672 OR10G7Q8NGN6 311 aa11.75□□□□□ -0.53
COPS3-210ENST00000492672 LINC00052Q96N35 136 aa11.75□□□□□ -0.53
COPS3-210ENST00000492672 GPR82Q96P67 336 aa11.75□□□□□ -0.53
COPS3-210ENST00000492672 RPRMQ9NS64 109 aa11.75□□□□□ -0.53
COPS3-210ENST00000492672 BOLA1Q9Y3E2 137 aa11.75□□□□□ -0.53
COPS3-210ENST00000492672 DNAH9Q9NYC9 4486 aa11.74□□□□□ -0.53
COPS3-210ENST00000492672 KANTRA0A1W2PQU2 76 aa11.74□□□□□ -0.53
COPS3-210ENST00000492672 PFDN1O60925 122 aa11.74□□□□□ -0.53
COPS3-210ENST00000492672 M6PRP20645 277 aa11.74□□□□□ -0.53
COPS3-210ENST00000492672 ACOT6Q3I5F7 207 aaPredicted RBP11.74□□□□□ -0.53
COPS3-210ENST00000492672 GDF5OSQ5U4N7 250 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms