RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 H3BRN7 92 aa6.31□□□□□ -1.4
HDAC3-211ENST00000491581 AMBPP02760 352 aa6.31□□□□□ -1.4
HDAC3-211ENST00000491581 FAUP35544 74 aaKnown RBP6.31□□□□□ -1.4
HDAC3-211ENST00000491581 CNN1P51911 297 aaKnown RBP6.31□□□□□ -1.4
HDAC3-211ENST00000491581 SRPXP78539 464 aa6.31□□□□□ -1.4
HDAC3-211ENST00000491581 PSG9Q00887 426 aa6.31□□□□□ -1.4
HDAC3-211ENST00000491581 TMEM41BQ5BJD5 291 aa6.31□□□□□ -1.4
HDAC3-211ENST00000491581 CYP2G1PQ6ZSU1 146 aa6.31□□□□□ -1.4
HDAC3-211ENST00000491581 NOXA1Q86UR1 476 aa6.31□□□□□ -1.4
HDAC3-211ENST00000491581 OR11H7Q8NGC8 314 aa6.31□□□□□ -1.4
HDAC3-211ENST00000491581 RNF126Q9BV68 326 aa6.31□□□□□ -1.4
HDAC3-211ENST00000491581 PSENENQ9NZ42 101 aa6.31□□□□□ -1.4
HDAC3-211ENST00000491581 TMED3Q9Y3Q3 217 aa6.31□□□□□ -1.4
HDAC3-211ENST00000491581 DYNC1H1Q14204 4646 aaKnown RBP6.3□□□□□ -1.4
HDAC3-211ENST00000491581 DUXBA0A1W2PPF3 345 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 PLAC8L1A1L4L8 177 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 PRAC2D3DTV9 90 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 ISLRO14498 428 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 NDUFB6O95139 128 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 OR4E1P0C645 316 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 SPART-AS1P0CW21 52 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 S100A5P33763 92 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 NUTF2P61970 127 aaKnown RBP6.3□□□□□ -1.4
HDAC3-211ENST00000491581 ID3Q02535 119 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 TMEM88Q6PEY1 159 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 SLC25A21Q9BQT8 299 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-211ENST00000491581 C7orf50Q9BRJ6 194 aaKnown RBP6.3□□□□□ -1.4
HDAC3-211ENST00000491581 NIPSNAP3BQ9BS92 247 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 C1QTNF4Q9BXJ3 329 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 RABL2AQ9UBK7 228 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-211ENST00000491581 RCL1Q9Y2P8 373 aaKnown RBP6.3□□□□□ -1.4
HDAC3-211ENST00000491581 STRAPQ9Y3F4 350 aaKnown RBP6.3□□□□□ -1.4
HDAC3-211ENST00000491581 PCLOQ9Y6V0 5065 aa6.3□□□□□ -1.4
HDAC3-211ENST00000491581 SLC17A3O00476 420 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 PLA2G10O15496 165 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 IL5P05113 134 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 OR5G3P0C626 314 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 LINC00869P0C866 280 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 SLC25A6P12236 298 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 HTN1P15515 57 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 ID1P41134 155 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 AP3S2P59780 193 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 C1orf194Q5T5A4 169 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 EBLN2Q6P2I7 272 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 POM121L12Q8N7R1 296 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 ZNF738Q8NE65 137 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 BPIFCQ8NFQ6 507 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 NEU1Q99519 415 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 SEC22CQ9BRL7 303 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 SHANK2-AS3Q9BTD1 123 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 NDUFAF3Q9BU61 184 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 TMEM147Q9BVK8 224 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 ARL6Q9H0F7 186 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 SEPSECSQ9HD40 501 aaKnown RBP6.29□□□□□ -1.4
HDAC3-211ENST00000491581 RPRMQ9NS64 109 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 GSKIPQ9P0R6 139 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 RFNGQ9Y644 331 aa6.29□□□□□ -1.4
HDAC3-211ENST00000491581 TRAV6A0A075B6T7 132 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 TRAV5A0A0B4J249 113 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 PRSS29PA6NIE9 313 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 A8MTW9 85 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 J3KRW8 73 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 MRPS12O15235 138 aaKnown RBP6.28□□□□□ -1.4
HDAC3-211ENST00000491581 MED6O75586 246 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 DEFB130BP0DP73 79 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 DEFB130AP0DP74 79 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 IL7P13232 177 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 GALR1P47211 349 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 TCTAP57738 103 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 HIST1H1AQ02539 215 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-211ENST00000491581 IAH1Q2TAA2 248 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-211ENST00000491581 C4orf46Q504U0 113 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 TMEM14EPQ6UXP3 125 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 TMEM144Q7Z5S9 345 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 ZNF575Q86XF7 245 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 ZBTB8BQ8NAP8 495 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-211ENST00000491581 IGF2BP2-AS1Q96M15 143 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 GOLT1BQ9Y3E0 138 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 PKHD1P08F94 4074 aa6.28□□□□□ -1.4
HDAC3-211ENST00000491581 C7orf66A4D0T2 115 aa6.27□□□□□ -1.41
HDAC3-211ENST00000491581 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-211ENST00000491581 HBE1P02100 147 aa6.27□□□□□ -1.41
HDAC3-211ENST00000491581 MBPP02686 304 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-211ENST00000491581 CXCL3P19876 107 aa6.27□□□□□ -1.41
HDAC3-211ENST00000491581 RRN3P1Q2M238 152 aa6.27□□□□□ -1.41
HDAC3-211ENST00000491581 SPANXN2Q5MJ10 180 aa6.27□□□□□ -1.41
HDAC3-211ENST00000491581 TRIQKQ629K1 86 aa6.27□□□□□ -1.41
HDAC3-211ENST00000491581 UBE2DNLQ8IWF7 75 aa6.27□□□□□ -1.41
HDAC3-211ENST00000491581 SMIM8Q96KF7 97 aa6.27□□□□□ -1.41
HDAC3-211ENST00000491581 CIB3Q96Q77 187 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-211ENST00000491581 MGST2Q99735 147 aa6.27□□□□□ -1.41
HDAC3-211ENST00000491581 TMEM208Q9BTX3 173 aa6.27□□□□□ -1.41
HDAC3-211ENST00000491581 HIGD1AQ9Y241 93 aa6.27□□□□□ -1.41
HDAC3-211ENST00000491581 FAM24AA6NFZ4 105 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 SMIM9A6NGZ8 99 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 H3BQ15 152 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 AGPAT2O15120 278 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 HYPMO75409 117 aa6.26□□□□□ -1.41
HDAC3-211ENST00000491581 CST7O76096 145 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms