RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 RNF182Q8N6D2 247 aa11.17□□□□□ -0.62
SMPD4-220ENST00000491319 OR4D5Q8NGN0 318 aa11.17□□□□□ -0.62
SMPD4-220ENST00000491319 SRRQ9GZT4 340 aa11.17□□□□□ -0.62
SMPD4-220ENST00000491319 KIAA1109Q2LD37 5005 aa11.16□□□□□ -0.62
SMPD4-220ENST00000491319 TRAV8-2A0A0B4J237 113 aa11.16□□□□□ -0.62
SMPD4-220ENST00000491319 C9orf170A2RU37 121 aa11.16□□□□□ -0.62
SMPD4-220ENST00000491319 H3BRN7 92 aa11.16□□□□□ -0.62
SMPD4-220ENST00000491319 CCNKO75909 580 aa11.16□□□□□ -0.62
SMPD4-220ENST00000491319 CNN1P51911 297 aaKnown RBP11.16□□□□□ -0.62
SMPD4-220ENST00000491319 UBE2MP61081 183 aaKnown RBP11.16□□□□□ -0.62
SMPD4-220ENST00000491319 ID3Q02535 119 aa11.16□□□□□ -0.62
SMPD4-220ENST00000491319 SPINK13Q1W4C9 94 aa11.16□□□□□ -0.62
SMPD4-220ENST00000491319 CYP2G1PQ6ZSU1 146 aa11.16□□□□□ -0.62
SMPD4-220ENST00000491319 TMEM144Q7Z5S9 345 aa11.16□□□□□ -0.62
SMPD4-220ENST00000491319 UBE2DNLQ8IWF7 75 aa11.16□□□□□ -0.62
SMPD4-220ENST00000491319 IGF2BP2-AS1Q96M15 143 aa11.16□□□□□ -0.62
SMPD4-220ENST00000491319 GPR82Q96P67 336 aa11.16□□□□□ -0.62
SMPD4-220ENST00000491319 RBM38Q9H0Z9 239 aaKnown RBP11.16□□□□□ -0.62
SMPD4-220ENST00000491319 PKHD1P08F94 4074 aa11.15□□□□□ -0.62
SMPD4-220ENST00000491319 PMS2P5A8MQ11 134 aa11.15□□□□□ -0.62
SMPD4-220ENST00000491319 M0R2Z0 102 aa11.15□□□□□ -0.62
SMPD4-220ENST00000491319 RTL8CO15255 209 aa11.15□□□□□ -0.62
SMPD4-220ENST00000491319 SSSCA1O60232 199 aa11.15□□□□□ -0.62
SMPD4-220ENST00000491319 FGL1Q08830 312 aa11.15□□□□□ -0.62
SMPD4-220ENST00000491319 OXA1LQ15070 435 aa11.15□□□□□ -0.62
SMPD4-220ENST00000491319 OR11H7Q8NGC8 314 aa11.15□□□□□ -0.62
SMPD4-220ENST00000491319 FAM210BQ96KR6 192 aa11.15□□□□□ -0.62
SMPD4-220ENST00000491319 TMEM208Q9BTX3 173 aa11.15□□□□□ -0.62
SMPD4-220ENST00000491319 SLC25A39Q9BZJ4 359 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-220ENST00000491319 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
SMPD4-220ENST00000491319 FLVCR2Q9UPI3 526 aa11.15□□□□□ -0.62
SMPD4-220ENST00000491319 IGLV2-18A0A075B6J9 118 aa11.14□□□□□ -0.63
SMPD4-220ENST00000491319 CRXO43186 299 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-220ENST00000491319 NDUFB6O95139 128 aa11.14□□□□□ -0.63
SMPD4-220ENST00000491319 PRM2P04554 102 aa11.14□□□□□ -0.63
SMPD4-220ENST00000491319 IL5P05113 134 aa11.14□□□□□ -0.63
SMPD4-220ENST00000491319 LINC00869P0C866 280 aa11.14□□□□□ -0.63
SMPD4-220ENST00000491319 DAD1P61803 113 aa11.14□□□□□ -0.63
SMPD4-220ENST00000491319 RRAS2P62070 204 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-220ENST00000491319 BAK1Q16611 211 aa11.14□□□□□ -0.63
SMPD4-220ENST00000491319 SPANXN2Q5MJ10 180 aa11.14□□□□□ -0.63
SMPD4-220ENST00000491319 UHRF2Q96PU4 802 aa11.14□□□□□ -0.63
SMPD4-220ENST00000491319 SHANK2-AS3Q9BTD1 123 aa11.14□□□□□ -0.63
SMPD4-220ENST00000491319 HIGD1AQ9Y241 93 aa11.14□□□□□ -0.63
SMPD4-220ENST00000491319 MUC4Q99102 2169 aa11.14□□□□□ -0.63
SMPD4-220ENST00000491319 DNAH17Q9UFH2 4485 aa11.13□□□□□ -0.63
SMPD4-220ENST00000491319 PRSS29PA6NIE9 313 aa11.13□□□□□ -0.63
SMPD4-220ENST00000491319 ZNF705GA8MUZ8 300 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-220ENST00000491319 INSP01308 110 aa11.13□□□□□ -0.63
SMPD4-220ENST00000491319 IFNA21P01568 189 aa11.13□□□□□ -0.63
SMPD4-220ENST00000491319 S100A7P31151 101 aa11.13□□□□□ -0.63
SMPD4-220ENST00000491319 INPP1P49441 399 aa11.13□□□□□ -0.63
SMPD4-220ENST00000491319 RAP2BP61225 183 aa11.13□□□□□ -0.63
SMPD4-220ENST00000491319 LGALS9BQ3B8N2 356 aa11.13□□□□□ -0.63
SMPD4-220ENST00000491319 TRIQKQ629K1 86 aa11.13□□□□□ -0.63
SMPD4-220ENST00000491319 TMEM88Q6PEY1 159 aa11.13□□□□□ -0.63
SMPD4-220ENST00000491319 BAP18Q8IXM2 172 aa11.13□□□□□ -0.63
SMPD4-220ENST00000491319 ZNF738Q8NE65 137 aa11.13□□□□□ -0.63
SMPD4-220ENST00000491319 LINC00854A0A1B0GVQ3 168 aa11.12□□□□□ -0.63
SMPD4-220ENST00000491319 DUSP14O95147 198 aaKnown RBP11.12□□□□□ -0.63
SMPD4-220ENST00000491319 OR5G3P0C626 314 aa11.12□□□□□ -0.63
SMPD4-220ENST00000491319 OR4E1P0C645 316 aa11.12□□□□□ -0.63
SMPD4-220ENST00000491319 PRB4P10163 310 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-220ENST00000491319 RPL7P18124 248 aaKnown RBP11.12□□□□□ -0.63
SMPD4-220ENST00000491319 TRAV12-2A0A075B6T6 113 aa11.11□□□□□ -0.63
SMPD4-220ENST00000491319 NAP1L6A6NFF2 107 aa11.11□□□□□ -0.63
SMPD4-220ENST00000491319 BOLA2-SMG1P6H3BVE0 249 aa11.11□□□□□ -0.63
SMPD4-220ENST00000491319 HYPMO75409 117 aa11.11□□□□□ -0.63
SMPD4-220ENST00000491319 SCGB1D2O95969 90 aa11.11□□□□□ -0.63
SMPD4-220ENST00000491319 METTL15P1P0C7V9 234 aa11.11□□□□□ -0.63
SMPD4-220ENST00000491319 ANXA7P20073 488 aaKnown RBP11.11□□□□□ -0.63
SMPD4-220ENST00000491319 BTCP35070 178 aa11.11□□□□□ -0.63
SMPD4-220ENST00000491319 PLP1P60201 277 aa11.11□□□□□ -0.63
SMPD4-220ENST00000491319 DLK1P80370 383 aa11.11□□□□□ -0.63
SMPD4-220ENST00000491319 TMEM14EPQ6UXP3 125 aa11.11□□□□□ -0.63
SMPD4-220ENST00000491319 Q6ZR54 194 aa11.11□□□□□ -0.63
SMPD4-220ENST00000491319 SMIM8Q96KF7 97 aa11.11□□□□□ -0.63
SMPD4-220ENST00000491319 SDHCQ99643 169 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-220ENST00000491319 A0A087X0K7 114 aa11.1□□□□□ -0.63
SMPD4-220ENST00000491319 CXCL3P19876 107 aa11.1□□□□□ -0.63
SMPD4-220ENST00000491319 SELENOTP62341 195 aa11.1□□□□□ -0.63
SMPD4-220ENST00000491319 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-220ENST00000491319 SLC38A11Q08AI6 406 aa11.1□□□□□ -0.63
SMPD4-220ENST00000491319 C4orf46Q504U0 113 aa11.1□□□□□ -0.63
SMPD4-220ENST00000491319 ARL6Q9H0F7 186 aa11.1□□□□□ -0.63
SMPD4-220ENST00000491319 RCL1Q9Y2P8 373 aaKnown RBP11.1□□□□□ -0.63
SMPD4-220ENST00000491319 IAH1Q2TAA2 248 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-220ENST00000491319 RNF212Q495C1 297 aa11.09□□□□□ -0.63
SMPD4-220ENST00000491319 PATE2Q6UY27 113 aa11.09□□□□□ -0.63
SMPD4-220ENST00000491319 OR8A1Q8NGG7 326 aa11.09□□□□□ -0.63
SMPD4-220ENST00000491319 MGAT4CQ9UBM8 478 aa11.09□□□□□ -0.63
SMPD4-220ENST00000491319 PLAC8L1A1L4L8 177 aa11.08□□□□□ -0.64
SMPD4-220ENST00000491319 LYRM9A8MSI8 78 aa11.08□□□□□ -0.64
SMPD4-220ENST00000491319 FNDC10F2Z333 226 aa11.08□□□□□ -0.64
SMPD4-220ENST00000491319 K7EPK0 472 aa11.08□□□□□ -0.64
SMPD4-220ENST00000491319 ZNF701M0R085 212 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-220ENST00000491319 MRPS12O15235 138 aaKnown RBP11.08□□□□□ -0.64
SMPD4-220ENST00000491319 AZU1P20160 251 aa11.08□□□□□ -0.64
SMPD4-220ENST00000491319 TEPPQ6URK8 271 aa11.08□□□□□ -0.64
SMPD4-220ENST00000491319 ZBTB8BQ8NAP8 495 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms