RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 RPRMQ9NS64 109 aa12.92□□□□□ -0.34
HMGN1-219ENST00000491183 NDUFA13Q9P0J0 144 aa12.92□□□□□ -0.34
HMGN1-219ENST00000491183 GSKIPQ9P0R6 139 aa12.92□□□□□ -0.34
HMGN1-219ENST00000491183 RCL1Q9Y2P8 373 aaKnown RBP12.92□□□□□ -0.34
HMGN1-219ENST00000491183 TRAV8-2A0A0B4J237 113 aa12.91□□□□□ -0.34
HMGN1-219ENST00000491183 LYRM1O43325 122 aa12.91□□□□□ -0.34
HMGN1-219ENST00000491183 MBPP02686 304 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-219ENST00000491183 TAS2R30P59541 319 aa12.91□□□□□ -0.34
HMGN1-219ENST00000491183 PLP1P60201 277 aa12.91□□□□□ -0.34
HMGN1-219ENST00000491183 ARL16Q0P5N6 197 aa12.91□□□□□ -0.34
HMGN1-219ENST00000491183 IGFL4Q6B9Z1 124 aa12.91□□□□□ -0.34
HMGN1-219ENST00000491183 GPR82Q96P67 336 aa12.91□□□□□ -0.34
HMGN1-219ENST00000491183 SHANK2-AS3Q9BTD1 123 aa12.91□□□□□ -0.34
HMGN1-219ENST00000491183 NPVFQ9HCQ7 196 aa12.91□□□□□ -0.34
HMGN1-219ENST00000491183 IGHV3OR16-12A0A075B7B8 117 aa12.9□□□□□ -0.34
HMGN1-219ENST00000491183 SMIM9A6NGZ8 99 aa12.9□□□□□ -0.34
HMGN1-219ENST00000491183 A8MTW9 85 aa12.9□□□□□ -0.34
HMGN1-219ENST00000491183 FNDC10F2Z333 226 aa12.9□□□□□ -0.34
HMGN1-219ENST00000491183 CCSO14618 274 aa12.9□□□□□ -0.34
HMGN1-219ENST00000491183 TSC22D2O75157 780 aa12.9□□□□□ -0.34
HMGN1-219ENST00000491183 HYPMO75409 117 aa12.9□□□□□ -0.34
HMGN1-219ENST00000491183 TCRBP04435 133 aa12.9□□□□□ -0.34
HMGN1-219ENST00000491183 LINC00869P0C866 280 aa12.9□□□□□ -0.34
HMGN1-219ENST00000491183 PATE2Q6UY27 113 aa12.9□□□□□ -0.34
HMGN1-219ENST00000491183 C1orf158Q8N1D5 194 aa12.9□□□□□ -0.34
HMGN1-219ENST00000491183 OR10P1Q8NGE3 313 aa12.9□□□□□ -0.34
HMGN1-219ENST00000491183 IGHV4-4A0A075B6R2 117 aa12.89□□□□□ -0.35
HMGN1-219ENST00000491183 DEFB131BA0A096LNP1 70 aa12.89□□□□□ -0.35
HMGN1-219ENST00000491183 C7orf66A4D0T2 115 aa12.89□□□□□ -0.35
HMGN1-219ENST00000491183 RAP2BP61225 183 aa12.89□□□□□ -0.35
HMGN1-219ENST00000491183 SELENOTP62341 195 aa12.89□□□□□ -0.35
HMGN1-219ENST00000491183 AMTNQ6UX39 209 aa12.89□□□□□ -0.35
HMGN1-219ENST00000491183 UHRF2Q96PU4 802 aa12.89□□□□□ -0.35
HMGN1-219ENST00000491183 HIGD1AQ9Y241 93 aa12.89□□□□□ -0.35
HMGN1-219ENST00000491183 VPS13DQ5THJ4 4388 aa12.89□□□□□ -0.35
HMGN1-219ENST00000491183 TRAV6A0A075B6T7 132 aa12.88□□□□□ -0.35
HMGN1-219ENST00000491183 K7EPK0 472 aa12.88□□□□□ -0.35
HMGN1-219ENST00000491183 OR5G3P0C626 314 aa12.88□□□□□ -0.35
HMGN1-219ENST00000491183 S100A7P31151 101 aa12.88□□□□□ -0.35
HMGN1-219ENST00000491183 EMP1P54849 157 aa12.88□□□□□ -0.35
HMGN1-219ENST00000491183 RNF182Q8N6D2 247 aa12.88□□□□□ -0.35
HMGN1-219ENST00000491183 RNF126Q9BV68 326 aa12.88□□□□□ -0.35
HMGN1-219ENST00000491183 FGL1Q08830 312 aa12.87□□□□□ -0.35
HMGN1-219ENST00000491183 SLC38A11Q08AI6 406 aa12.87□□□□□ -0.35
HMGN1-219ENST00000491183 TEPPQ6URK8 271 aa12.87□□□□□ -0.35
HMGN1-219ENST00000491183 SEC22CQ9BRL7 303 aa12.87□□□□□ -0.35
HMGN1-219ENST00000491183 ARL6Q9H0F7 186 aa12.87□□□□□ -0.35
HMGN1-219ENST00000491183 MGAT4CQ9UBM8 478 aa12.87□□□□□ -0.35
HMGN1-219ENST00000491183 RFNGQ9Y644 331 aa12.87□□□□□ -0.35
HMGN1-219ENST00000491183 TMEM189A5PLL7 270 aa12.86□□□□□ -0.35
HMGN1-219ENST00000491183 SPART-AS1P0CW21 52 aa12.86□□□□□ -0.35
HMGN1-219ENST00000491183 RPL7P18124 248 aaKnown RBP12.86□□□□□ -0.35
HMGN1-219ENST00000491183 CNN1P51911 297 aaKnown RBP12.86□□□□□ -0.35
HMGN1-219ENST00000491183 ZNF431Q8TF32 576 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-219ENST00000491183 GGACTQ9BVM4 153 aa12.86□□□□□ -0.35
HMGN1-219ENST00000491183 C11orf1Q9H5F2 150 aa12.86□□□□□ -0.35
HMGN1-219ENST00000491183 NUDT15Q9NV35 164 aa12.86□□□□□ -0.35
HMGN1-219ENST00000491183 PLA2G2EQ9NZK7 142 aa12.86□□□□□ -0.35
HMGN1-219ENST00000491183 GOLT1BQ9Y3E0 138 aa12.86□□□□□ -0.35
HMGN1-219ENST00000491183 FRAS1Q86XX4 4008 aa12.86□□□□□ -0.35
HMGN1-219ENST00000491183 AGPAT2O15120 278 aa12.85□□□□□ -0.35
HMGN1-219ENST00000491183 MRPS12O15235 138 aaKnown RBP12.85□□□□□ -0.35
HMGN1-219ENST00000491183 ZNF846Q147U1 533 aa12.85□□□□□ -0.35
HMGN1-219ENST00000491183 OR11H7Q8NGC8 314 aa12.85□□□□□ -0.35
HMGN1-219ENST00000491183 IGF2BP2-AS1Q96M15 143 aa12.85□□□□□ -0.35
HMGN1-219ENST00000491183 CCDC32Q9BV29 185 aa12.85□□□□□ -0.35
HMGN1-219ENST00000491183 ARV1Q9H2C2 271 aa12.85□□□□□ -0.35
HMGN1-219ENST00000491183 DKK2Q9UBU2 259 aa12.85□□□□□ -0.35
HMGN1-219ENST00000491183 A0A087X0K7 114 aa12.84□□□□□ -0.35
HMGN1-219ENST00000491183 FAM25EA8MYX2 175 aa12.84□□□□□ -0.35
HMGN1-219ENST00000491183 CRXO43186 299 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-219ENST00000491183 DUSP14O95147 198 aaKnown RBP12.84□□□□□ -0.35
HMGN1-219ENST00000491183 AMBPP02760 352 aa12.84□□□□□ -0.35
HMGN1-219ENST00000491183 H2AFB2P0C5Z0 115 aa12.84□□□□□ -0.35
HMGN1-219ENST00000491183 FAM222AQ5U5X8 452 aa12.84□□□□□ -0.35
HMGN1-219ENST00000491183 C12orf45Q8N5I9 185 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-219ENST00000491183 MGST2Q99735 147 aa12.84□□□□□ -0.35
HMGN1-219ENST00000491183 LSM5Q9Y4Y9 91 aaKnown RBP12.84□□□□□ -0.35
HMGN1-219ENST00000491183 LOC102723971A0A1B0GUV8 181 aa12.83□□□□□ -0.36
HMGN1-219ENST00000491183 C5orf51A6NDU8 294 aa12.83□□□□□ -0.36
HMGN1-219ENST00000491183 L7N2F9 121 aa12.83□□□□□ -0.36
HMGN1-219ENST00000491183 GOSR2O14653 212 aa12.83□□□□□ -0.36
HMGN1-219ENST00000491183 HBE1P02100 147 aa12.83□□□□□ -0.36
HMGN1-219ENST00000491183 CXCL3P19876 107 aa12.83□□□□□ -0.36
HMGN1-219ENST00000491183 VAMP2P63027 116 aa12.83□□□□□ -0.36
HMGN1-219ENST00000491183 SPINK13Q1W4C9 94 aa12.83□□□□□ -0.36
HMGN1-219ENST00000491183 ZNF546Q86UE3 836 aa12.83□□□□□ -0.36
HMGN1-219ENST00000491183 ZNF738Q8NE65 137 aa12.83□□□□□ -0.36
HMGN1-219ENST00000491183 FAM24AA6NFZ4 105 aa12.82□□□□□ -0.36
HMGN1-219ENST00000491183 M0R2Z0 102 aa12.82□□□□□ -0.36
HMGN1-219ENST00000491183 PRM2P04554 102 aa12.82□□□□□ -0.36
HMGN1-219ENST00000491183 PRB4P10163 310 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-219ENST00000491183 IL15RAQ13261 267 aa12.82□□□□□ -0.36
HMGN1-219ENST00000491183 RRN3P1Q2M238 152 aa12.82□□□□□ -0.36
HMGN1-219ENST00000491183 PXDC1Q5TGL8 231 aa12.82□□□□□ -0.36
HMGN1-219ENST00000491183 TMEM37Q8WXS4 190 aa12.82□□□□□ -0.36
HMGN1-219ENST00000491183 C2orf50Q96LR7 162 aa12.82□□□□□ -0.36
HMGN1-219ENST00000491183 NIPSNAP3BQ9BS92 247 aa12.82□□□□□ -0.36
HMGN1-219ENST00000491183 YTHDF2Q9Y5A9 579 aaKnown RBP12.82□□□□□ -0.36
HMGN1-219ENST00000491183 DNAH10Q8IVF4 4471 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 205.8 ms