RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 IGKV3-7A0A075B6H7 116 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 CGB1A6NKQ9 187 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 F2Z2F3 143 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 H3BUX3 64 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 TNFRSF13BO14836 293 aaPredicted RBP5.83□□□□□ -1.48
NPHP3-208ENST00000490993 UQCRFS1P47985 274 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 SSBP2P81877 361 aaPredicted RBP5.83□□□□□ -1.48
NPHP3-208ENST00000490993 TMEM136Q6ZRR5 245 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 WFDC3Q8IUB2 231 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 SYT8Q8NBV8 401 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 DYSFO75923 2080 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 GVINP1Q7Z2Y8 2422 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 ZNF324O75467 553 aaPredicted RBP5.83□□□□□ -1.48
NPHP3-208ENST00000490993 SPATA45Q537H7 98 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 C9orf139Q6ZV77 190 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 Q8N7P7 452 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 AP5S1Q9NUS5 200 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 UQCR10Q9UDW1 63 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 IGHV3-66A0A0C4DH42 116 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 A1L4Q6 167 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 TEX22C9J3V5 150 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 H3BUA1 57 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 ZNF207O43670 478 aaKnown RBP5.83□□□□□ -1.48
NPHP3-208ENST00000490993 REC114Q7Z4M0 266 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 TMEM219Q86XT9 240 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 MYOZ3Q8TDC0 251 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 PRELID3AQ96N28 172 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 TMEM70Q9BUB7 260 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 PCNTO95613 3336 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 F5H697 171 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 CA1P00915 261 aaPredicted RBP5.83□□□□□ -1.48
NPHP3-208ENST00000490993 ORMDL3Q8N138 153 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 CADP27708 2225 aa5.83□□□□□ -1.48
NPHP3-208ENST00000490993 IGHV3OR16-13A0A075B7E8 117 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 IGHV3-74A0A0B4J1X5 117 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 J3KRW8 73 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 PPBPP02775 128 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 PRSS1P07477 247 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 CACNG7P62955 275 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 HIST1H1AQ02539 215 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-208ENST00000490993 PAX2Q02962 417 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 UTF1Q5T230 341 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 BRD3OSQ6XYD6 125 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 ZNF491Q8N8L2 437 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 NRN1Q9NPD7 142 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 PHLDA3Q9Y5J5 127 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 LOC389332A0A1B0GUA5 103 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 ODF3BA8MYP8 253 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 PPP1R17O96001 155 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 RPL15P61313 204 aaKnown RBP5.82□□□□□ -1.48
NPHP3-208ENST00000490993 C11orf71Q6IPW1 123 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 LINC00479Q96M42 142 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 ZNF48Q96MX3 618 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-208ENST00000490993 ZGRF1Q86YA3 2104 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 SP5Q6BEB4 398 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-208ENST00000490993 ARL6IP6Q8N6S5 226 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 FAM167A-AS1Q96KT0 104 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 IGLV11-55A0A075B6I3 123 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 IGHV3OR16-8A0A075B7F1 116 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 IGHV3-49A0A0A0MS15 119 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 K7EN84 100 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 ASIPP42127 132 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 FOXA3P55318 350 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-208ENST00000490993 TMEM97Q5BJF2 176 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 LCN12Q6JVE5 192 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 OR8A1Q8NGG7 326 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 SIRPDQ9H106 197 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 APC2O95996 2303 aa5.82□□□□□ -1.48
NPHP3-208ENST00000490993 IGKV1OR2-108A0A075B7D4 117 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 K7EIM0 57 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 LTAP01374 205 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 CRYGBP07316 175 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 PSMG4Q5JS54 123 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 PATE2Q6UY27 113 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 TRANK1O15050 2925 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 IGHV3-11P01762 117 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 SSBP4Q9BWG4 385 aaPredicted RBP5.81□□□□□ -1.48
NPHP3-208ENST00000490993 IGKV2-40A0A087WW87 121 aaPredicted RBP5.81□□□□□ -1.48
NPHP3-208ENST00000490993 TRAV21A0A0B4J279 112 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 IGKV2D-40P01614 121 aaPredicted RBP5.81□□□□□ -1.48
NPHP3-208ENST00000490993 MGPP08493 103 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 GP9P14770 177 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 ZNF138P52744 262 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 RUSC1-AS1Q66K80 236 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 ATP6V0BQ99437 205 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 ESPL1Q14674 2120 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 CENPVL3A0A0U1RRI6 287 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 E7EUB6 86 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 LY6LH3BQJ8 138 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 NDUFS7O75251 213 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 APOHP02749 345 aaPredicted RBP5.81□□□□□ -1.48
NPHP3-208ENST00000490993 LINC00614P0C842 121 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 PYY3Q5JQD4 70 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 FAM159AQ6UWV7 190 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 OR4X2Q8NGF9 303 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 LINC00477Q96M19 166 aa5.81□□□□□ -1.48
NPHP3-208ENST00000490993 IGHV4-39P01824 125 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 LEPP41159 167 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 COA6Q5JTJ3 125 aaKnown RBP5.8□□□□□ -1.48
NPHP3-208ENST00000490993 FAM120AOSQ5T036 256 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms