RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 PSMB3P49720 205 aa11.27□□□□□ -0.61
VPS26A-207ENST00000490696 EWSR1Q01844 656 aaKnown RBP eCLIP11.27□□□□□ -0.61
VPS26A-207ENST00000490696 NHLH2Q02577 135 aa11.27□□□□□ -0.61
VPS26A-207ENST00000490696 RAB31Q13636 194 aa11.27□□□□□ -0.61
VPS26A-207ENST00000490696 ATP6V1FQ16864 119 aa11.27□□□□□ -0.61
VPS26A-207ENST00000490696 RSG1Q9BU20 258 aa11.27□□□□□ -0.61
VPS26A-207ENST00000490696 RNF126Q9BV68 326 aa11.27□□□□□ -0.61
VPS26A-207ENST00000490696 SLC25A31Q9H0C2 315 aa11.27□□□□□ -0.61
VPS26A-207ENST00000490696 ARV1Q9H2C2 271 aa11.27□□□□□ -0.61
VPS26A-207ENST00000490696 ISLRO14498 428 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 MPC2O95563 127 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 CA1P00915 261 aaPredicted RBP11.26□□□□□ -0.61
VPS26A-207ENST00000490696 ID1P41134 155 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 MEOX2P50222 304 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 PRR20EP86478 221 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 PRR20CP86479 221 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 PRR20DP86480 221 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 PRR20BP86481 221 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 PRR20AP86496 221 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 SAMD13Q5VXD3 122 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 CHAC2Q8WUX2 184 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 TMEM37Q8WXS4 190 aa11.26□□□□□ -0.61
VPS26A-207ENST00000490696 H3BMM0 161 aa11.25□□□□□ -0.61
VPS26A-207ENST00000490696 SPP1P10451 314 aa11.25□□□□□ -0.61
VPS26A-207ENST00000490696 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
VPS26A-207ENST00000490696 CXCL3P19876 107 aa11.25□□□□□ -0.61
VPS26A-207ENST00000490696 BAXQ07812 192 aa11.25□□□□□ -0.61
VPS26A-207ENST00000490696 OPCMLQ14982 345 aa11.25□□□□□ -0.61
VPS26A-207ENST00000490696 MIC13Q5XKP0 118 aa11.25□□□□□ -0.61
VPS26A-207ENST00000490696 MORN3Q6PF18 240 aaPredicted RBP11.25□□□□□ -0.61
VPS26A-207ENST00000490696 S100A7AQ86SG5 101 aa11.25□□□□□ -0.61
VPS26A-207ENST00000490696 OR5C1Q8NGR4 320 aa11.25□□□□□ -0.61
VPS26A-207ENST00000490696 GATAD1Q8WUU5 269 aa11.25□□□□□ -0.61
VPS26A-207ENST00000490696 LINC00052Q96N35 136 aa11.25□□□□□ -0.61
VPS26A-207ENST00000490696 EPPK1P58107 5090 aaKnown RBP11.25□□□□□ -0.61
VPS26A-207ENST00000490696 PET100P0DJ07 73 aa11.24□□□□□ -0.61
VPS26A-207ENST00000490696 LYL1P12980 280 aa11.24□□□□□ -0.61
VPS26A-207ENST00000490696 HLA-DRB4P13762 266 aa11.24□□□□□ -0.61
VPS26A-207ENST00000490696 C4BPBP20851 252 aa11.24□□□□□ -0.61
VPS26A-207ENST00000490696 FGF7P21781 194 aa11.24□□□□□ -0.61
VPS26A-207ENST00000490696 RPL29P47914 159 aaKnown RBP11.24□□□□□ -0.61
VPS26A-207ENST00000490696 DEFB1P60022 68 aa11.24□□□□□ -0.61
VPS26A-207ENST00000490696 CASC10Q5T4H9 136 aa11.24□□□□□ -0.61
VPS26A-207ENST00000490696 LINC00305Q7Z4B0 112 aa11.24□□□□□ -0.61
VPS26A-207ENST00000490696 C20orf173Q96LM9 149 aa11.24□□□□□ -0.61
VPS26A-207ENST00000490696 HLA-DRB4X5D2U9 266 aa11.24□□□□□ -0.61
VPS26A-207ENST00000490696 RYR2Q92736 4967 aa11.24□□□□□ -0.61
VPS26A-207ENST00000490696 ELOA3CA0A087WX78 387 aaPredicted RBP11.23□□□□□ -0.61
VPS26A-207ENST00000490696 MRPS12O15235 138 aaKnown RBP11.23□□□□□ -0.61
VPS26A-207ENST00000490696 COX7A2P2O60397 106 aa11.23□□□□□ -0.61
VPS26A-207ENST00000490696 MPDU1O75352 247 aa11.23□□□□□ -0.61
VPS26A-207ENST00000490696 GDF5OSQ5U4N7 250 aa11.23□□□□□ -0.61
VPS26A-207ENST00000490696 MORN5Q5VZ52 161 aa11.23□□□□□ -0.61
VPS26A-207ENST00000490696 FOXI2Q6ZQN5 318 aa11.23□□□□□ -0.61
VPS26A-207ENST00000490696 Q6ZRG5 221 aa11.23□□□□□ -0.61
VPS26A-207ENST00000490696 OR11H7Q8NGC8 314 aa11.23□□□□□ -0.61
VPS26A-207ENST00000490696 C16orf92Q96LL3 132 aa11.23□□□□□ -0.61
VPS26A-207ENST00000490696 SAV1Q9H4B6 383 aaPredicted RBP11.23□□□□□ -0.61
VPS26A-207ENST00000490696 DNAJC4Q9NNZ3 241 aa11.23□□□□□ -0.61
VPS26A-207ENST00000490696 SLC39A9Q9NUM3 307 aa11.23□□□□□ -0.61
VPS26A-207ENST00000490696 MBD2Q9UBB5 411 aa11.23□□□□□ -0.61
VPS26A-207ENST00000490696 RNF24Q9Y225 148 aa11.23□□□□□ -0.61
VPS26A-207ENST00000490696 A0A087X0K7 114 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 TRAV8-2A0A0B4J237 113 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 A0A0J9YWU9 116 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 ATF4P18848 351 aaPredicted RBP11.22□□□□□ -0.61
VPS26A-207ENST00000490696 B2MP61769 119 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 CLINT1Q14677 625 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 FCN2Q15485 313 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 RGS21Q2M5E4 152 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 TMEM41BQ5BJD5 291 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 C10orf113Q5VZT2 155 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 THAP6Q8TBB0 222 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 NPCDR1Q9BY65 106 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 MED28Q9H204 178 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 PXMP4Q9Y6I8 212 aa11.22□□□□□ -0.61
VPS26A-207ENST00000490696 FGL1Q08830 312 aa11.21□□□□□ -0.61
VPS26A-207ENST00000490696 IGFL4Q6B9Z1 124 aa11.21□□□□□ -0.61
VPS26A-207ENST00000490696 ZFAND6Q6FIF0 208 aa11.21□□□□□ -0.61
VPS26A-207ENST00000490696 OR1L4Q8NGR5 311 aa11.21□□□□□ -0.61
VPS26A-207ENST00000490696 OR11H2Q8NH07 326 aa11.21□□□□□ -0.61
VPS26A-207ENST00000490696 RARRES2Q99969 163 aa11.21□□□□□ -0.61
VPS26A-207ENST00000490696 HSPB11Q9Y547 144 aa11.21□□□□□ -0.61
VPS26A-207ENST00000490696 F6UB75 175 aa11.2□□□□□ -0.62
VPS26A-207ENST00000490696 RPL12P30050 165 aaKnown RBP11.2□□□□□ -0.62
VPS26A-207ENST00000490696 OXA1LQ15070 435 aa11.2□□□□□ -0.62
VPS26A-207ENST00000490696 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
VPS26A-207ENST00000490696 CSNK1G2-AS1Q8NCQ2 148 aa11.2□□□□□ -0.62
VPS26A-207ENST00000490696 CLUHP3Q96NS8 147 aa11.2□□□□□ -0.62
VPS26A-207ENST00000490696 PFDN5Q99471 154 aa11.2□□□□□ -0.62
VPS26A-207ENST00000490696 WDR61Q9GZS3 305 aaKnown RBP11.2□□□□□ -0.62
VPS26A-207ENST00000490696 RPRMQ9NS64 109 aa11.2□□□□□ -0.62
VPS26A-207ENST00000490696 CSMD3Q7Z407 3707 aa11.19□□□□□ -0.62
VPS26A-207ENST00000490696 A0A0J9YX75 114 aa11.19□□□□□ -0.62
VPS26A-207ENST00000490696 NUTF2P61970 127 aaKnown RBP11.19□□□□□ -0.62
VPS26A-207ENST00000490696 BPIFA4PQ86YQ2 179 aa11.19□□□□□ -0.62
VPS26A-207ENST00000490696 RNF182Q8N6D2 247 aa11.19□□□□□ -0.62
VPS26A-207ENST00000490696 IL17DQ8TAD2 202 aa11.19□□□□□ -0.62
VPS26A-207ENST00000490696 ATP5SQ99766 215 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms