RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 TM4SF5O14894 197 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 CDKN1BP46527 198 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 BRWD1-AS2P59051 145 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 IGFL4Q6B9Z1 124 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 LYZL1Q6UWQ5 148 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 IGHV1-46P01743 117 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 HSD52Q0P140 79 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 TTC9CQ8N5M4 171 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 DEFB104AQ8WTQ1 72 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 KIAA1549Q9HCM3 1950 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 CDH23Q9H251 3354 aa10.4□□□□□ -0.75
SHOX2-205ENST00000490689 LYNX1G3V0Z9 82 aa10.4□□□□□ -0.75
SHOX2-205ENST00000490689 LYNX1P0DP58 116 aa10.4□□□□□ -0.75
SHOX2-205ENST00000490689 LCNL1Q6ZST4 164 aa10.4□□□□□ -0.75
SHOX2-205ENST00000490689 Q8TCH9 128 aa10.4□□□□□ -0.75
SHOX2-205ENST00000490689 HCFC1P51610 2035 aa10.39□□□□□ -0.75
SHOX2-205ENST00000490689 F2RL2O00254 374 aa10.39□□□□□ -0.75
SHOX2-205ENST00000490689 CEACAM3P40198 252 aa10.39□□□□□ -0.75
SHOX2-205ENST00000490689 CFAP54Q96N23 3096 aa10.39□□□□□ -0.75
SHOX2-205ENST00000490689 OR11H12B2RN74 326 aa10.39□□□□□ -0.75
SHOX2-205ENST00000490689 APOMO95445 188 aa10.39□□□□□ -0.75
SHOX2-205ENST00000490689 OR11H1Q8NG94 326 aa10.39□□□□□ -0.75
SHOX2-205ENST00000490689 OR11H2Q8NH07 326 aa10.39□□□□□ -0.75
SHOX2-205ENST00000490689 Q8TAT8 98 aa10.39□□□□□ -0.75
SHOX2-205ENST00000490689 NDUFB8O95169 186 aa10.39□□□□□ -0.75
SHOX2-205ENST00000490689 MFAP4P55083 255 aa10.39□□□□□ -0.75
SHOX2-205ENST00000490689 SLC25A48Q6ZT89 311 aaKnown RBP10.39□□□□□ -0.75
SHOX2-205ENST00000490689 C11orf53Q8IXP5 236 aa10.39□□□□□ -0.75
SHOX2-205ENST00000490689 C1orf162Q8NEQ5 155 aaPredicted RBP10.39□□□□□ -0.75
SHOX2-205ENST00000490689 IGKV2-40A0A087WW87 121 aaPredicted RBP10.38□□□□□ -0.75
SHOX2-205ENST00000490689 A0A1B0GV72 72 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 TMEM213A2RRL7 107 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 IGKV2D-40P01614 121 aaPredicted RBP10.38□□□□□ -0.75
SHOX2-205ENST00000490689 DAZAP2Q15038 168 aaPredicted RBP10.38□□□□□ -0.75
SHOX2-205ENST00000490689 PPP1R27Q86WC6 154 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 C8orf46Q8TAG6 207 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 MRPL16Q9NX20 251 aaKnown RBP10.38□□□□□ -0.75
SHOX2-205ENST00000490689 RABAC1Q9UI14 185 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 IGKV1OR2-108A0A075B7D4 117 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 PPIAL4CA0A0B4J2A2 164 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 C19orf67A6NJJ6 358 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 H0YJW9 148 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 PPIAL4GP0DN37 164 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 WT1-ASQ06250 92 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 TMEM249Q2WGJ8 235 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 TMEM78Q5T7P6 136 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 ASCL5Q7RTU5 278 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 OR4X2Q8NGF9 303 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 SIGMAR1Q99720 223 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 SLC25A39Q9BZJ4 359 aaPredicted RBP10.38□□□□□ -0.75
SHOX2-205ENST00000490689 K7EP13 123 aa10.38□□□□□ -0.75
SHOX2-205ENST00000490689 SRSF6Q13247 344 aaKnown RBP10.38□□□□□ -0.75
SHOX2-205ENST00000490689 A0A1W2PPI3 338 aa10.37□□□□□ -0.75
SHOX2-205ENST00000490689 GOSR1O95249 250 aa10.37□□□□□ -0.75
SHOX2-205ENST00000490689 M0R381 172 aa10.37□□□□□ -0.75
SHOX2-205ENST00000490689 CD3EP07766 207 aa10.37□□□□□ -0.75
SHOX2-205ENST00000490689 RNF125Q96EQ8 232 aa10.37□□□□□ -0.75
SHOX2-205ENST00000490689 IGKV3-15P01624 115 aa10.37□□□□□ -0.75
SHOX2-205ENST00000490689 ESDP10768 282 aa10.37□□□□□ -0.75
SHOX2-205ENST00000490689 DIAPH2-AS1Q14236 149 aa10.37□□□□□ -0.75
SHOX2-205ENST00000490689 C17orf58Q2M2W7 97 aa10.37□□□□□ -0.75
SHOX2-205ENST00000490689 TMEM200BQ69YZ2 307 aa10.37□□□□□ -0.75
SHOX2-205ENST00000490689 ZNF788Q6ZQV5 615 aa10.37□□□□□ -0.75
SHOX2-205ENST00000490689 C2CD3Q4AC94 2353 aa10.37□□□□□ -0.75
SHOX2-205ENST00000490689 PROP1O75360 226 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 TOMM40O96008 361 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 PAX2Q02962 417 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 PSG3Q16557 428 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 ZNF479Q96JC4 524 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 TPSG1Q9NRR2 321 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 TMEM133Q9H2Q1 129 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 DNAH14Q0VDD8 3507 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 HTN1P15515 57 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 TMPRSS3P57727 454 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 SPRNQ5BIV9 151 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 UTF1Q5T230 341 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 OR5A1Q8NGJ0 315 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 Q86TA4 180 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 RPRMLQ8N4K4 120 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 TMEM167AQ8TBQ9 72 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 GAFA1Q96PS6 74 aa10.36□□□□□ -0.75
SHOX2-205ENST00000490689 C17orf100A8MU93 164 aa10.35□□□□□ -0.75
SHOX2-205ENST00000490689 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.35□□□□□ -0.75
SHOX2-205ENST00000490689 MDS2Q8NDY4 140 aa10.35□□□□□ -0.75
SHOX2-205ENST00000490689 ANKHD1Q8IWZ3 2542 aaKnown RBP10.35□□□□□ -0.75
SHOX2-205ENST00000490689 BSPH1Q075Z2 132 aa10.35□□□□□ -0.75
SHOX2-205ENST00000490689 FXYD5Q96DB9 178 aa10.35□□□□□ -0.75
SHOX2-205ENST00000490689 LOC105371242A0A075B767 164 aa10.35□□□□□ -0.75
SHOX2-205ENST00000490689 ZC2HC1BQ5TFG8 222 aa10.35□□□□□ -0.75
SHOX2-205ENST00000490689 Q6AWC8 147 aa10.35□□□□□ -0.75
SHOX2-205ENST00000490689 FAM231DQ6ZW35 169 aa10.35□□□□□ -0.75
SHOX2-205ENST00000490689 DEFB125Q8N687 156 aa10.35□□□□□ -0.75
SHOX2-205ENST00000490689 OR9G4Q8NGQ1 327 aa10.35□□□□□ -0.75
SHOX2-205ENST00000490689 VKORC1Q9BQB6 163 aa10.35□□□□□ -0.75
SHOX2-205ENST00000490689 BEX4Q9NWD9 120 aaPredicted RBP10.35□□□□□ -0.75
SHOX2-205ENST00000490689 SMAD7O15105 426 aaKnown RBP10.34□□□□□ -0.75
SHOX2-205ENST00000490689 MEF2CQ06413 473 aaPredicted RBP10.34□□□□□ -0.75
SHOX2-205ENST00000490689 TMEM30BQ3MIR4 351 aa10.34□□□□□ -0.75
SHOX2-205ENST00000490689 NDUFA4L2Q9NRX3 87 aa10.34□□□□□ -0.75
SHOX2-205ENST00000490689 TAX1BP3O14907 124 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms