RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 FMC1Q96HJ9 113 aa11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 KCNS1Q96KK3 526 aa11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 TMEM14BQ9NUH8 114 aa11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 KRTAP27-1Q3LI81 207 aa11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 FAM120AOSQ5T036 256 aa11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 SEPSECSQ9HD40 501 aaKnown RBP11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 MYO15AQ9UKN7 3530 aa11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 MGST2Q99735 147 aa11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 TRBV20OR9-2A0A075B6H5 130 aa11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 IGKV3OR2-268A0A0C4DH90 116 aa11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 FCN3O75636 299 aa11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 SMIM6P0DI80 62 aa11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 NDUFA4L2Q9NRX3 87 aa11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 RPL35AP18077 110 aaKnown RBP11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 RPP25LQ8N5L8 163 aaKnown RBP11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 KIR2DL4Q99706 377 aa11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 TRAV21A0A0B4J279 112 aa11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 CENPVL3A0A0U1RRI6 287 aa11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 SLC17A3O00476 420 aa11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 HOXB4P17483 251 aaPredicted RBP11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 EXOC3-AS1Q8N2X6 119 aa11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 IGFBPL1Q8WX77 278 aa11.53□□□□□ -0.56
ARHGEF39-205ENST00000490638 TMEM262E9PQX1 116 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 H7C1H1 209 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 SRP19P09132 144 aaKnown RBP11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 ACTL10Q5JWF8 245 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 SPATA31B1PQ5VZV4 182 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 C9orf139Q6ZV77 190 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 OR11H1Q8NG94 326 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 TMEM191AQ9H0A3 160 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 PRDM13Q9H4Q3 707 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 OR11H6Q8NGC7 330 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 VAMP8Q9BV40 100 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 KLK15Q9H2R5 256 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 MAP1LC3AQ9H492 121 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 JKAMPQ9P055 326 aa11.52□□□□□ -0.56
ARHGEF39-205ENST00000490638 A0A1B0GUT8 65 aa11.52□□□□□ -0.57
ARHGEF39-205ENST00000490638 STAG3L2P0CL84 134 aa11.52□□□□□ -0.57
ARHGEF39-205ENST00000490638 STAG3L3P0CL85 134 aa11.52□□□□□ -0.57
ARHGEF39-205ENST00000490638 ATRAIDQ6UW56 229 aa11.52□□□□□ -0.57
ARHGEF39-205ENST00000490638 VN1R17PQ8TDU5 208 aa11.52□□□□□ -0.57
ARHGEF39-205ENST00000490638 TNFRSF18Q9Y5U5 241 aa11.52□□□□□ -0.57
ARHGEF39-205ENST00000490638 TMEM50AO95807 157 aa11.52□□□□□ -0.57
ARHGEF39-205ENST00000490638 ELOBQ15370 118 aa11.52□□□□□ -0.57
ARHGEF39-205ENST00000490638 MAP1LC3CQ9BXW4 147 aa11.52□□□□□ -0.57
ARHGEF39-205ENST00000490638 SRRM4A7MD48 611 aaKnown RBP11.51□□□□□ -0.57
ARHGEF39-205ENST00000490638 CCL20P78556 96 aa11.51□□□□□ -0.57
ARHGEF39-205ENST00000490638 PLXNB1O43157 2135 aa11.51□□□□□ -0.57
ARHGEF39-205ENST00000490638 LEPP41159 167 aa11.51□□□□□ -0.57
ARHGEF39-205ENST00000490638 HERVK_113P61574 105 aa11.51□□□□□ -0.57
ARHGEF39-205ENST00000490638 C19orf54Q5BKX5 351 aa11.51□□□□□ -0.57
ARHGEF39-205ENST00000490638 FER1L6-AS1Q8NA97 138 aa11.51□□□□□ -0.57
ARHGEF39-205ENST00000490638 ANAPC10Q9UM13 185 aa11.51□□□□□ -0.57
ARHGEF39-205ENST00000490638 ZFP30Q9Y2G7 519 aa11.51□□□□□ -0.57
ARHGEF39-205ENST00000490638 NPIPB5A8MRT5 1133 aa11.51□□□□□ -0.57
ARHGEF39-205ENST00000490638 ELANEP08246 267 aa11.51□□□□□ -0.57
ARHGEF39-205ENST00000490638 WT1-ASQ06250 92 aa11.51□□□□□ -0.57
ARHGEF39-205ENST00000490638 IQCJQ1A5X6 159 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 CHD9Q3L8U1 2897 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 LINC01619G3V211 115 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 FOXA3P55318 350 aaPredicted RBP11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 DEFB131AP59861 70 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 Q6ZSR3 168 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 A8MXK9 166 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 NUDT3O95989 172 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 IGKV1-39P01597 117 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 IGKV1D-39P04432 117 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 ZFP36P26651 326 aaKnown RBP11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 WIPF3A6NGB9 483 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 TOMM40O96008 361 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 PPIFP30405 207 aaKnown RBP11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 IGFL4Q6B9Z1 124 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 SCGB1D4Q6XE38 83 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 AGMATQ9BSE5 352 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 HSPB8Q9UJY1 196 aa11.5□□□□□ -0.57
ARHGEF39-205ENST00000490638 BLCAPP62952 87 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 HBBP68871 147 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 C19orf35Q6ZS72 473 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 REC114Q7Z4M0 266 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 GPR61Q9BZJ8 451 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 IGKV2-40A0A087WW87 121 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 IGKV2D-40P01614 121 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 TRGC2P03986 189 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 MRPL18Q9H0U6 180 aaKnown RBP11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 RPP21Q9H633 154 aaKnown RBP11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 M0R3E3 92 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 TMEM183BQ1AE95 376 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 Q1RN00 199 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 TMEM183AQ8IXX5 376 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 MBD3L1Q8WWY6 194 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 UBE2E2Q96LR5 201 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 RFNGQ9Y644 331 aa11.49□□□□□ -0.57
ARHGEF39-205ENST00000490638 NACAE9PAV3 2078 aa11.48□□□□□ -0.57
ARHGEF39-205ENST00000490638 SRIP30626 198 aa11.48□□□□□ -0.57
ARHGEF39-205ENST00000490638 TCTEX1D4Q5JR98 221 aa11.48□□□□□ -0.57
ARHGEF39-205ENST00000490638 TMEM136Q6ZRR5 245 aa11.48□□□□□ -0.57
ARHGEF39-205ENST00000490638 NRN1Q9NPD7 142 aa11.48□□□□□ -0.57
ARHGEF39-205ENST00000490638 ARHGAP32A7KAX9 2087 aa11.48□□□□□ -0.57
ARHGEF39-205ENST00000490638 C8orf31Q8N9H6 132 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms