RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 BAP18Q8IXM2 172 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 LYPD1Q8N2G4 141 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 FRZBQ92765 325 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 SLC25A22Q9H936 323 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 KCNIP3Q9Y2W7 256 aa13.66□□□□□ -0.22
UPK3B-205ENST00000490360 SMCO1Q147U7 214 aa13.65□□□□□ -0.22
UPK3B-205ENST00000490360 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.65□□□□□ -0.22
UPK3B-205ENST00000490360 RBKSQ9H477 322 aa13.65□□□□□ -0.22
UPK3B-205ENST00000490360 MRPS16Q9Y3D3 137 aaKnown RBP13.65□□□□□ -0.22
UPK3B-205ENST00000490360 PIGBOS1A0A0B4J2F0 54 aa13.64□□□□□ -0.23
UPK3B-205ENST00000490360 RAB11AP62491 216 aa13.64□□□□□ -0.23
UPK3B-205ENST00000490360 OR5I1Q13606 314 aa13.64□□□□□ -0.23
UPK3B-205ENST00000490360 THAP8Q8NA92 274 aa13.64□□□□□ -0.23
UPK3B-205ENST00000490360 PPP1R14DQ9NXH3 145 aa13.64□□□□□ -0.23
UPK3B-205ENST00000490360 TRAV12-2A0A075B6T6 113 aa13.63□□□□□ -0.23
UPK3B-205ENST00000490360 TRAV26-1A0A087WT03 109 aa13.63□□□□□ -0.23
UPK3B-205ENST00000490360 A0A0B4J2A0 478 aa13.63□□□□□ -0.23
UPK3B-205ENST00000490360 DISC1C4P0D8 188 aa13.63□□□□□ -0.23
UPK3B-205ENST00000490360 TMEM263Q8WUH6 116 aaKnown RBP13.63□□□□□ -0.23
UPK3B-205ENST00000490360 AP3S1Q92572 193 aa13.63□□□□□ -0.23
UPK3B-205ENST00000490360 C17orf77Q96MU5 243 aa13.63□□□□□ -0.23
UPK3B-205ENST00000490360 SHPKQ9UHJ6 478 aa13.63□□□□□ -0.23
UPK3B-205ENST00000490360 GPR132Q9UNW8 380 aa13.63□□□□□ -0.23
UPK3B-205ENST00000490360 AKR1C4P17516 323 aa13.62□□□□□ -0.23
UPK3B-205ENST00000490360 DLK1P80370 383 aa13.62□□□□□ -0.23
UPK3B-205ENST00000490360 ESRGQ1W209 222 aa13.62□□□□□ -0.23
UPK3B-205ENST00000490360 Q5VSD8 79 aa13.62□□□□□ -0.23
UPK3B-205ENST00000490360 ZNF738Q8NE65 137 aa13.62□□□□□ -0.23
UPK3B-205ENST00000490360 BPIFCQ8NFQ6 507 aa13.62□□□□□ -0.23
UPK3B-205ENST00000490360 TMEM147Q9BVK8 224 aa13.62□□□□□ -0.23
UPK3B-205ENST00000490360 NOP10Q9NPE3 64 aaKnown RBP13.62□□□□□ -0.23
UPK3B-205ENST00000490360 HTN1P15515 57 aa13.61□□□□□ -0.23
UPK3B-205ENST00000490360 RHOBP62745 196 aa13.61□□□□□ -0.23
UPK3B-205ENST00000490360 RNASE8Q8TDE3 154 aaKnown RBP13.61□□□□□ -0.23
UPK3B-205ENST00000490360 UHRF2Q96PU4 802 aa13.61□□□□□ -0.23
UPK3B-205ENST00000490360 C20orf144Q9BQM9 153 aa13.61□□□□□ -0.23
UPK3B-205ENST00000490360 SLC25A39Q9BZJ4 359 aaPredicted RBP13.61□□□□□ -0.23
UPK3B-205ENST00000490360 ZNF586Q9NXT0 402 aa13.61□□□□□ -0.23
UPK3B-205ENST00000490360 EXTL2Q9UBQ6 330 aa13.61□□□□□ -0.23
UPK3B-205ENST00000490360 IGKV1OR2-108A0A075B7D4 117 aa13.6□□□□□ -0.23
UPK3B-205ENST00000490360 TRAV8-2A0A0B4J237 113 aa13.6□□□□□ -0.23
UPK3B-205ENST00000490360 H7BYZ3 331 aa13.6□□□□□ -0.23
UPK3B-205ENST00000490360 ZNF701M0R085 212 aaPredicted RBP13.6□□□□□ -0.23
UPK3B-205ENST00000490360 NCS1P62166 190 aa13.6□□□□□ -0.23
UPK3B-205ENST00000490360 MRPS10P82664 201 aaKnown RBP13.6□□□□□ -0.23
UPK3B-205ENST00000490360 LINC00612Q8N6U2 182 aa13.6□□□□□ -0.23
UPK3B-205ENST00000490360 PRRT1Q99946 306 aa13.6□□□□□ -0.23
UPK3B-205ENST00000490360 SRRM2Q9UQ35 2752 aaKnown RBP13.6□□□□□ -0.23
UPK3B-205ENST00000490360 ORM2P19652 201 aa13.59□□□□□ -0.23
UPK3B-205ENST00000490360 CDKN1BP46527 198 aa13.59□□□□□ -0.23
UPK3B-205ENST00000490360 XGP55808 180 aa13.59□□□□□ -0.23
UPK3B-205ENST00000490360 LINC00315P59091 139 aa13.59□□□□□ -0.23
UPK3B-205ENST00000490360 ERVFC1-1P60608 527 aa13.59□□□□□ -0.23
UPK3B-205ENST00000490360 SRPXP78539 464 aa13.59□□□□□ -0.23
UPK3B-205ENST00000490360 HIST1H1AQ02539 215 aaPredicted RBP13.59□□□□□ -0.23
UPK3B-205ENST00000490360 FGL1Q08830 312 aa13.59□□□□□ -0.23
UPK3B-205ENST00000490360 RNF182Q8N6D2 247 aa13.59□□□□□ -0.23
UPK3B-205ENST00000490360 OR8A1Q8NGG7 326 aa13.59□□□□□ -0.23
UPK3B-205ENST00000490360 OR1S1Q8NH92 325 aa13.59□□□□□ -0.23
UPK3B-205ENST00000490360 SCGB3A2Q96PL1 93 aa13.59□□□□□ -0.23
UPK3B-205ENST00000490360 A0A087WXM4 84 aa13.58□□□□□ -0.24
UPK3B-205ENST00000490360 RPL7P18124 248 aaKnown RBP13.58□□□□□ -0.24
UPK3B-205ENST00000490360 VBP1P61758 197 aa13.58□□□□□ -0.24
UPK3B-205ENST00000490360 RPP30P78346 268 aaKnown RBP13.58□□□□□ -0.24
UPK3B-205ENST00000490360 IGFL4Q6B9Z1 124 aa13.58□□□□□ -0.24
UPK3B-205ENST00000490360 Q6ZRN7 208 aaPredicted RBP13.58□□□□□ -0.24
UPK3B-205ENST00000490360 CCDC28AQ8IWP9 274 aa13.58□□□□□ -0.24
UPK3B-205ENST00000490360 A0A0J9YY99 117 aa13.57□□□□□ -0.24
UPK3B-205ENST00000490360 IFNA5P01569 189 aa13.57□□□□□ -0.24
UPK3B-205ENST00000490360 RLN2P04090 185 aa13.57□□□□□ -0.24
UPK3B-205ENST00000490360 ANXA3P12429 323 aa13.57□□□□□ -0.24
UPK3B-205ENST00000490360 LYZL2Q7Z4W2 148 aa13.57□□□□□ -0.24
UPK3B-205ENST00000490360 S100A7AQ86SG5 101 aa13.57□□□□□ -0.24
UPK3B-205ENST00000490360 ATP6V1G2O95670 118 aa13.56□□□□□ -0.24
UPK3B-205ENST00000490360 AKAIN1P0CW23 69 aa13.56□□□□□ -0.24
UPK3B-205ENST00000490360 FAAP20Q6NZ36 180 aa13.56□□□□□ -0.24
UPK3B-205ENST00000490360 CIB3Q96Q77 187 aaPredicted RBP13.56□□□□□ -0.24
UPK3B-205ENST00000490360 FUNDC2Q9BWH2 189 aa13.56□□□□□ -0.24
UPK3B-205ENST00000490360 RNF24Q9Y225 148 aa13.56□□□□□ -0.24
UPK3B-205ENST00000490360 FLG2Q5D862 2391 aaPredicted RBP13.56□□□□□ -0.24
UPK3B-205ENST00000490360 MYCBP2O75592 4640 aa13.55□□□□□ -0.24
UPK3B-205ENST00000490360 MED6O75586 246 aa13.55□□□□□ -0.24
UPK3B-205ENST00000490360 CXCL3P19876 107 aa13.55□□□□□ -0.24
UPK3B-205ENST00000490360 HOXA5P20719 270 aa13.55□□□□□ -0.24
UPK3B-205ENST00000490360 RAP2BP61225 183 aa13.55□□□□□ -0.24
UPK3B-205ENST00000490360 PSG3Q16557 428 aa13.55□□□□□ -0.24
UPK3B-205ENST00000490360 PAIP2BQ9ULR5 123 aaKnown RBP13.55□□□□□ -0.24
UPK3B-205ENST00000490360 A0A087X0K7 114 aa13.54□□□□□ -0.24
UPK3B-205ENST00000490360 DUXBA0A1W2PPF3 345 aa13.54□□□□□ -0.24
UPK3B-205ENST00000490360 SNURFLB1AK76 121 aa13.54□□□□□ -0.24
UPK3B-205ENST00000490360 H3BRN7 92 aa13.54□□□□□ -0.24
UPK3B-205ENST00000490360 SIVA1O15304 175 aa13.54□□□□□ -0.24
UPK3B-205ENST00000490360 NFE4Q86UQ8 179 aa13.54□□□□□ -0.24
UPK3B-205ENST00000490360 LRRC20Q8TCA0 184 aa13.54□□□□□ -0.24
UPK3B-205ENST00000490360 SHANK2-AS3Q9BTD1 123 aa13.54□□□□□ -0.24
UPK3B-205ENST00000490360 SCP2D1Q9UJQ7 156 aa13.54□□□□□ -0.24
UPK3B-205ENST00000490360 GAGE12BA1L429 117 aa13.53□□□□□ -0.24
UPK3B-205ENST00000490360 PITX3O75364 302 aa13.53□□□□□ -0.24
UPK3B-205ENST00000490360 GAGE7O76087 117 aa13.53□□□□□ -0.24
UPK3B-205ENST00000490360 GAGE12FP0CL80 117 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms