RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 ACOT6Q3I5F7 207 aaPredicted RBP9.37□□□□□ -0.91
HDAC1-210ENST00000490081 FFAR4Q5NUL3 377 aa9.37□□□□□ -0.91
HDAC1-210ENST00000490081 SAMD13Q5VXD3 122 aa9.37□□□□□ -0.91
HDAC1-210ENST00000490081 OR8I2Q8N0Y5 310 aa9.37□□□□□ -0.91
HDAC1-210ENST00000490081 HSD17B11Q8NBQ5 300 aa9.37□□□□□ -0.91
HDAC1-210ENST00000490081 PPP1R14BQ96C90 147 aa9.37□□□□□ -0.91
HDAC1-210ENST00000490081 ZNF256Q9Y2P7 627 aaPredicted RBP9.37□□□□□ -0.91
HDAC1-210ENST00000490081 DNAH3Q8TD57 4116 aa9.37□□□□□ -0.91
HDAC1-210ENST00000490081 IGHV3OR16-13A0A075B7E8 117 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 A0A087X0K7 114 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 IGHV3-49A0A0A0MS15 119 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 IGHV3-74A0A0B4J1X5 117 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 MRPS12O15235 138 aaKnown RBP9.36□□□□□ -0.91
HDAC1-210ENST00000490081 KRTAP10-11P60412 298 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 SIGLEC15Q6ZMC9 328 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 SLC51BQ86UW2 128 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 BPIFA4PQ86YQ2 179 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 BAP18Q8IXM2 172 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 STXBP6Q8NFX7 210 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 UHRF2Q96PU4 802 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 TMEM14CQ9P0S9 112 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 DOK5Q9P104 306 aa9.36□□□□□ -0.91
HDAC1-210ENST00000490081 IZUMO1RA6ND01 250 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 OR4C46A6NHA9 309 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 TPT1P13693 172 aaKnown RBP9.35□□□□□ -0.91
HDAC1-210ENST00000490081 GP9P14770 177 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 GALR1P47211 349 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 RHOBP62745 196 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 FAM78BQ5VT40 261 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 DCANP1Q8TF63 244 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 SCRT1Q9BWW7 348 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 ZNF471Q9BX82 626 aaPredicted RBP9.35□□□□□ -0.91
HDAC1-210ENST00000490081 SLC25A32Q9H2D1 315 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 MS4A6AQ9H2W1 248 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 NRN1Q9NPD7 142 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 FUT9Q9Y231 359 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 SMAD5-AS1Q9Y6J3 95 aa9.35□□□□□ -0.91
HDAC1-210ENST00000490081 PRKDCP78527 4128 aaKnown RBP9.35□□□□□ -0.91
HDAC1-210ENST00000490081 IGHV3-66A0A0C4DH42 116 aa9.34□□□□□ -0.91
HDAC1-210ENST00000490081 UMAD1C9J7I0 102 aa9.34□□□□□ -0.91
HDAC1-210ENST00000490081 K7EQG2 157 aa9.34□□□□□ -0.91
HDAC1-210ENST00000490081 GUK1Q16774 197 aa9.34□□□□□ -0.91
HDAC1-210ENST00000490081 TMEM41BQ5BJD5 291 aa9.34□□□□□ -0.91
HDAC1-210ENST00000490081 GCSAMLQ5JQS6 135 aa9.34□□□□□ -0.91
HDAC1-210ENST00000490081 EIF5AL1Q6IS14 154 aaKnown RBP9.34□□□□□ -0.91
HDAC1-210ENST00000490081 RPP25LQ8N5L8 163 aaKnown RBP9.34□□□□□ -0.91
HDAC1-210ENST00000490081 OR10G4Q8NGN3 311 aa9.34□□□□□ -0.91
HDAC1-210ENST00000490081 OR10G9Q8NGN4 311 aa9.34□□□□□ -0.91
HDAC1-210ENST00000490081 OR10G7Q8NGN6 311 aa9.34□□□□□ -0.91
HDAC1-210ENST00000490081 FAM167A-AS1Q96KT0 104 aa9.34□□□□□ -0.91
HDAC1-210ENST00000490081 C17orf77Q96MU5 243 aa9.34□□□□□ -0.91
HDAC1-210ENST00000490081 HRH4Q9H3N8 390 aa9.34□□□□□ -0.91
HDAC1-210ENST00000490081 ZNF253O75346 499 aa9.33□□□□□ -0.92
HDAC1-210ENST00000490081 IGLC2P0DOY2 106 aa9.33□□□□□ -0.92
HDAC1-210ENST00000490081 TAS2R45P59539 299 aa9.33□□□□□ -0.92
HDAC1-210ENST00000490081 MORN5Q5VZ52 161 aa9.33□□□□□ -0.92
HDAC1-210ENST00000490081 Q8N1Y9 231 aa9.33□□□□□ -0.92
HDAC1-210ENST00000490081 SH3BGRL3Q9H299 93 aa9.33□□□□□ -0.92
HDAC1-210ENST00000490081 SLC25A22Q9H936 323 aa9.33□□□□□ -0.92
HDAC1-210ENST00000490081 RPRMQ9NS64 109 aa9.33□□□□□ -0.92
HDAC1-210ENST00000490081 CLEC5AQ9NY25 188 aa9.33□□□□□ -0.92
HDAC1-210ENST00000490081 RFNGQ9Y644 331 aa9.33□□□□□ -0.92
HDAC1-210ENST00000490081 A0A1W2PPV4 95 aa9.32□□□□□ -0.92
HDAC1-210ENST00000490081 A8MZ25 164 aa9.32□□□□□ -0.92
HDAC1-210ENST00000490081 DNASE2O00115 360 aaPredicted RBP9.32□□□□□ -0.92
HDAC1-210ENST00000490081 SOCS3O14543 225 aa9.32□□□□□ -0.92
HDAC1-210ENST00000490081 HIST1H1EP10412 219 aaKnown RBP9.32□□□□□ -0.92
HDAC1-210ENST00000490081 RAB5CP51148 216 aa9.32□□□□□ -0.92
HDAC1-210ENST00000490081 RPL11P62913 178 aaKnown RBP9.32□□□□□ -0.92
HDAC1-210ENST00000490081 PDE6HQ13956 83 aa9.32□□□□□ -0.92
HDAC1-210ENST00000490081 GUCA2BQ16661 112 aa9.32□□□□□ -0.92
HDAC1-210ENST00000490081 LEMD1Q68G75 181 aa9.32□□□□□ -0.92
HDAC1-210ENST00000490081 DPPA3Q6W0C5 159 aa9.32□□□□□ -0.92
HDAC1-210ENST00000490081 PQLC2Q6ZP29 291 aa9.32□□□□□ -0.92
HDAC1-210ENST00000490081 PHYHIPLQ96FC7 376 aa9.32□□□□□ -0.92
HDAC1-210ENST00000490081 ACTR3CQ9C0K3 210 aaPredicted RBP9.32□□□□□ -0.92
HDAC1-210ENST00000490081 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
HDAC1-210ENST00000490081 TRAV5A0A0B4J249 113 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 ISLRO14498 428 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 STAG3L2P0CL84 134 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 STAG3L3P0CL85 134 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 PSMB3P49720 205 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 RAB2AP61019 212 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 KHDC3LQ587J8 217 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 AKR1C8PQ5T2L2 129 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 MIR17HGQ75NE6 70 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 GTSCR1Q86UQ5 136 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 SUN5Q8TC36 379 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 SAT2Q96F10 170 aaPredicted RBP9.31□□□□□ -0.92
HDAC1-210ENST00000490081 SLC25A2Q9BXI2 301 aa9.31□□□□□ -0.92
HDAC1-210ENST00000490081 ATF4P18848 351 aaPredicted RBP9.3□□□□□ -0.92
HDAC1-210ENST00000490081 ID1P41134 155 aa9.3□□□□□ -0.92
HDAC1-210ENST00000490081 CDC34P49427 236 aaPredicted RBP9.3□□□□□ -0.92
HDAC1-210ENST00000490081 SNRPD3P62318 126 aaKnown RBP9.3□□□□□ -0.92
HDAC1-210ENST00000490081 SPATA31B1PQ5VZV4 182 aa9.3□□□□□ -0.92
HDAC1-210ENST00000490081 LCN15Q6UWW0 184 aa9.3□□□□□ -0.92
HDAC1-210ENST00000490081 RAB24Q969Q5 203 aa9.3□□□□□ -0.92
HDAC1-210ENST00000490081 SLC50A1Q9BRV3 221 aa9.3□□□□□ -0.92
HDAC1-210ENST00000490081 OR51M1Q9H341 326 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms