RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 UBQLN2Q9UHD9 624 aa8.12□□□□□ -1.11
VPS13D-210ENST00000489961 MEGF8Q7Z7M0 2845 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 HMSDA8MTL9 139 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 A8MZ25 164 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 TAAR5O14804 337 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 ATF4P18848 351 aaPredicted RBP8.11□□□□□ -1.11
VPS13D-210ENST00000489961 MEOX2P50222 304 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 ODF3L2Q3SX64 289 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 SAMD13Q5VXD3 122 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 AKAP14Q86UN6 197 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 TCTE3Q8IZS6 198 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 DEFB125Q8N687 156 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 DCANP1Q8TF63 244 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 WFDC10AQ9H1F0 79 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 SRD5A3Q9H8P0 318 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 MAP6D1Q9H9H5 199 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 SEPSECSQ9HD40 501 aaKnown RBP8.11□□□□□ -1.11
VPS13D-210ENST00000489961 C19orf73Q9NVV2 129 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 TIMM9Q9Y5J7 89 aa8.11□□□□□ -1.11
VPS13D-210ENST00000489961 FRMD6-AS1P0C7T7 363 aa8.1□□□□□ -1.11
VPS13D-210ENST00000489961 ZNF688P0C7X2 276 aa8.1□□□□□ -1.11
VPS13D-210ENST00000489961 ID1P41134 155 aa8.1□□□□□ -1.11
VPS13D-210ENST00000489961 SNRPD3P62318 126 aaKnown RBP8.1□□□□□ -1.11
VPS13D-210ENST00000489961 ZNF345Q14585 488 aa8.1□□□□□ -1.11
VPS13D-210ENST00000489961 FFAR4Q5NUL3 377 aa8.1□□□□□ -1.11
VPS13D-210ENST00000489961 BPIFA4PQ86YQ2 179 aa8.1□□□□□ -1.11
VPS13D-210ENST00000489961 HSD17B11Q8NBQ5 300 aa8.1□□□□□ -1.11
VPS13D-210ENST00000489961 OR11H4Q8NGC9 324 aa8.1□□□□□ -1.11
VPS13D-210ENST00000489961 DNAH3Q8TD57 4116 aa8.09□□□□□ -1.11
VPS13D-210ENST00000489961 A0A0D9SG52 128 aa8.09□□□□□ -1.11
VPS13D-210ENST00000489961 JTBO76095 146 aa8.09□□□□□ -1.11
VPS13D-210ENST00000489961 DEFB131AP59861 70 aa8.09□□□□□ -1.11
VPS13D-210ENST00000489961 ACOT6Q3I5F7 207 aaPredicted RBP8.09□□□□□ -1.11
VPS13D-210ENST00000489961 FAM78BQ5VT40 261 aa8.09□□□□□ -1.11
VPS13D-210ENST00000489961 RPL7L1Q6DKI1 246 aaKnown RBP8.09□□□□□ -1.11
VPS13D-210ENST00000489961 KCNRGQ8N5I3 272 aa8.09□□□□□ -1.11
VPS13D-210ENST00000489961 FAM24BQ8N5W8 94 aa8.09□□□□□ -1.11
VPS13D-210ENST00000489961 B9D2Q9BPU9 175 aa8.09□□□□□ -1.11
VPS13D-210ENST00000489961 PSMG3Q9BT73 122 aaPredicted RBP8.09□□□□□ -1.11
VPS13D-210ENST00000489961 MRPL32Q9BYC8 188 aaKnown RBP8.09□□□□□ -1.11
VPS13D-210ENST00000489961 A0A1B0GVG6 124 aa8.08□□□□□ -1.12
VPS13D-210ENST00000489961 ISLRO14498 428 aa8.08□□□□□ -1.12
VPS13D-210ENST00000489961 ATP6V0CP27449 155 aa8.08□□□□□ -1.12
VPS13D-210ENST00000489961 PSMB3P49720 205 aa8.08□□□□□ -1.12
VPS13D-210ENST00000489961 GCSAMLQ5JQS6 135 aa8.08□□□□□ -1.12
VPS13D-210ENST00000489961 PSMG4Q5JS54 123 aa8.08□□□□□ -1.12
VPS13D-210ENST00000489961 MORN5Q5VZ52 161 aa8.08□□□□□ -1.12
VPS13D-210ENST00000489961 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.08□□□□□ -1.12
VPS13D-210ENST00000489961 APRG1Q8IVJ8 170 aa8.08□□□□□ -1.12
VPS13D-210ENST00000489961 LRRC20Q8TCA0 184 aa8.08□□□□□ -1.12
VPS13D-210ENST00000489961 GNPNAT1Q96EK6 184 aaPredicted RBP8.08□□□□□ -1.12
VPS13D-210ENST00000489961 C16orf92Q96LL3 132 aa8.08□□□□□ -1.12
VPS13D-210ENST00000489961 ARPC5LQ9BPX5 153 aa8.08□□□□□ -1.12
VPS13D-210ENST00000489961 A0A087X0K7 114 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 LOC102724200A0A096LPH7 203 aaPredicted RBP8.07□□□□□ -1.12
VPS13D-210ENST00000489961 TRAV5A0A0B4J249 113 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 KANTRA0A1W2PQU2 76 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 SOCS3O14543 225 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 MRPS12O15235 138 aaKnown RBP8.07□□□□□ -1.12
VPS13D-210ENST00000489961 C1QBP02746 253 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 CXCL2P19875 107 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 M6PRP20645 277 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 RHOBP62745 196 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 SERF2P84101 59 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 OR2G3Q8NGZ4 309 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 LINC00052Q96N35 136 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 CITED4Q96RK1 184 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 FUT9Q9Y231 359 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 RFNGQ9Y644 331 aa8.07□□□□□ -1.12
VPS13D-210ENST00000489961 A0A1W2PPV4 95 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 RBMY1BA6NDE4 496 aaKnown RBP8.06□□□□□ -1.12
VPS13D-210ENST00000489961 RBMY1EA6NEQ0 496 aaKnown RBP8.06□□□□□ -1.12
VPS13D-210ENST00000489961 BCL2L11O43521 198 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 PFDN1O60925 122 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 MBP02144 154 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 RBMY1DP0C7P1 496 aaKnown RBP8.06□□□□□ -1.12
VPS13D-210ENST00000489961 TAS2R45P59539 299 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 ZNF124Q15973 351 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 GUK1Q16774 197 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 LCN15Q6UWW0 184 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 LINC00322Q6ZN03 302 aaPredicted RBP8.06□□□□□ -1.12
VPS13D-210ENST00000489961 MIR17HGQ75NE6 70 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 STHQ8IWL8 128 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 OR10G4Q8NGN3 311 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 OR10G9Q8NGN4 311 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 OR10G7Q8NGN6 311 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 HYLS1Q96M11 299 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 SLC50A1Q9BRV3 221 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 HRH4Q9H3N8 390 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 TMEM14CQ9P0S9 112 aa8.06□□□□□ -1.12
VPS13D-210ENST00000489961 NHLRC4P0CG21 123 aaPredicted RBP8.05□□□□□ -1.12
VPS13D-210ENST00000489961 IGLC2P0DOY2 106 aa8.05□□□□□ -1.12
VPS13D-210ENST00000489961 APOC4P55056 127 aa8.05□□□□□ -1.12
VPS13D-210ENST00000489961 RAB2AP61019 212 aa8.05□□□□□ -1.12
VPS13D-210ENST00000489961 EIF5AP63241 154 aaKnown RBP8.05□□□□□ -1.12
VPS13D-210ENST00000489961 KHDC3LQ587J8 217 aa8.05□□□□□ -1.12
VPS13D-210ENST00000489961 SPATA31B1PQ5VZV4 182 aa8.05□□□□□ -1.12
VPS13D-210ENST00000489961 FAM122CQ6P4D5 195 aa8.05□□□□□ -1.12
VPS13D-210ENST00000489961 TMUB2Q71RG4 321 aa8.05□□□□□ -1.12
VPS13D-210ENST00000489961 SBSPONQ8IVN8 264 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms