RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 COL8A1P27658 744 aa12.44□□□□□ -0.42
BRD9-208ENST00000489816 MBD6Q96DN6 1003 aa12.44□□□□□ -0.42
BRD9-208ENST00000489816 GRAMD2BQ96HH9 432 aa12.44□□□□□ -0.42
BRD9-208ENST00000489816 CLEC5AQ9NY25 188 aa12.44□□□□□ -0.42
BRD9-208ENST00000489816 TRBV9A0A0B4J1U6 114 aa12.43□□□□□ -0.42
BRD9-208ENST00000489816 I3L2K1 104 aa12.43□□□□□ -0.42
BRD9-208ENST00000489816 CSN3P07498 182 aa12.43□□□□□ -0.42
BRD9-208ENST00000489816 CA7P43166 264 aa12.43□□□□□ -0.42
BRD9-208ENST00000489816 Q56UQ5 140 aa12.43□□□□□ -0.42
BRD9-208ENST00000489816 FLNCQ14315 2725 aa12.43□□□□□ -0.42
BRD9-208ENST00000489816 NIT1Q86X76 327 aa12.43□□□□□ -0.42
BRD9-208ENST00000489816 C5orf17Q8NAS9 161 aa12.43□□□□□ -0.42
BRD9-208ENST00000489816 DPM3Q9P2X0 92 aa12.43□□□□□ -0.42
BRD9-208ENST00000489816 TP73-AS1Q9UF72 201 aa12.43□□□□□ -0.42
BRD9-208ENST00000489816 ZFYVE26Q68DK2 2539 aa12.43□□□□□ -0.42
BRD9-208ENST00000489816 K7EIM0 57 aa12.42□□□□□ -0.42
BRD9-208ENST00000489816 TFPI2P48307 235 aa12.42□□□□□ -0.42
BRD9-208ENST00000489816 A0A1W2PPR1 153 aa12.42□□□□□ -0.42
BRD9-208ENST00000489816 STXBP6Q8NFX7 210 aa12.42□□□□□ -0.42
BRD9-208ENST00000489816 C7orf69Q9H7B7 122 aa12.42□□□□□ -0.42
BRD9-208ENST00000489816 KIR2DL5BA0A0G2JN68 375 aa12.42□□□□□ -0.42
BRD9-208ENST00000489816 KIR2DL5BA0A0G2JPC4 375 aa12.42□□□□□ -0.42
BRD9-208ENST00000489816 CYB5R2Q6BCY4 276 aa12.42□□□□□ -0.42
BRD9-208ENST00000489816 KIR2DL5AQ8N109 375 aa12.42□□□□□ -0.42
BRD9-208ENST00000489816 M0R143 59 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 M0R2Z0 102 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 TCAPO15273 167 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 NDPQ00604 133 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 BEND2Q8NDZ0 799 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 BORCS7Q96B45 105 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 C2orf88Q9BSF0 95 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 RAB1BQ9H0U4 201 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 LOC105371242A0A075B767 164 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 IGHV3OR16-13A0A075B7E8 117 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 IGHV3-74A0A0B4J1X5 117 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 Q8N976 141 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 RPP21Q9H633 154 aaKnown RBP12.41□□□□□ -0.42
BRD9-208ENST00000489816 USP9YO00507 2555 aaPredicted RBP12.41□□□□□ -0.42
BRD9-208ENST00000489816 POLQO75417 2590 aa12.41□□□□□ -0.42
BRD9-208ENST00000489816 NBR2O15453 112 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 GNG7O60262 68 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 SPATA45Q537H7 98 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 TEX43Q6ZNM6 134 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 SSX8Q7RTT4 187 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 PKD1L2Q7Z442 2459 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 OR2J3O76001 311 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 OR10J3Q5JRS4 329 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 LINC00173Q6ZV60 143 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 TNFRSF14Q92956 283 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 LY6LH3BQJ8 138 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 ESDP10768 282 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 TIMD4Q96H15 378 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 MLST8Q9BVC4 326 aa12.4□□□□□ -0.42
BRD9-208ENST00000489816 OR2T8A6NH00 312 aa12.39□□□□□ -0.43
BRD9-208ENST00000489816 ALKBH7Q9BT30 221 aaPredicted RBP12.39□□□□□ -0.43
BRD9-208ENST00000489816 MYO18BQ8IUG5 2567 aa12.39□□□□□ -0.43
BRD9-208ENST00000489816 PIEZO1Q92508 2521 aa12.39□□□□□ -0.43
BRD9-208ENST00000489816 ZFP36P26651 326 aaKnown RBP12.39□□□□□ -0.43
BRD9-208ENST00000489816 DOPEY2Q9Y3R5 2298 aa12.39□□□□□ -0.43
BRD9-208ENST00000489816 EBLN2Q6P2I7 272 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 FAM231DQ6ZW35 169 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 ZNF491Q8N8L2 437 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 RNF125Q96EQ8 232 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 CFAP46Q8IYW2 2715 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 CUBNO60494 3623 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 IGHV3-66A0A0C4DH42 116 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 A8MWL6 223 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 TOMM40O96008 361 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 IGHV3OR16-10A0A075B7F0 116 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 LTAP01374 205 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 NUTF2P61970 127 aaKnown RBP12.38□□□□□ -0.43
BRD9-208ENST00000489816 ZC2HC1AQ96GY0 325 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 KLF12Q9Y4X4 402 aa12.38□□□□□ -0.43
BRD9-208ENST00000489816 FAM208BQ5VWN6 2430 aa12.37□□□□□ -0.43
BRD9-208ENST00000489816 HBBP68871 147 aa12.37□□□□□ -0.43
BRD9-208ENST00000489816 VMO1Q7Z5L0 202 aa12.37□□□□□ -0.43
BRD9-208ENST00000489816 Q86TA4 180 aa12.37□□□□□ -0.43
BRD9-208ENST00000489816 C8orf49Q96NF6 230 aa12.37□□□□□ -0.43
BRD9-208ENST00000489816 PMCHL2Q9BQD1 86 aa12.37□□□□□ -0.43
BRD9-208ENST00000489816 MIEN1Q9BRT3 115 aa12.37□□□□□ -0.43
BRD9-208ENST00000489816 COL25A1Q9BXS0 654 aaPredicted RBP12.37□□□□□ -0.43
BRD9-208ENST00000489816 IGHV3-49A0A0A0MS15 119 aa12.37□□□□□ -0.43
BRD9-208ENST00000489816 BPIFA4PQ86YQ2 179 aa12.37□□□□□ -0.43
BRD9-208ENST00000489816 CFHR4Q92496 578 aa12.37□□□□□ -0.43
BRD9-208ENST00000489816 TXN2Q99757 166 aa12.37□□□□□ -0.43
BRD9-208ENST00000489816 CHEK1O14757 476 aa12.36□□□□□ -0.43
BRD9-208ENST00000489816 IGLV2-11P01706 119 aa12.36□□□□□ -0.43
BRD9-208ENST00000489816 ZNF25P17030 456 aaPredicted RBP12.36□□□□□ -0.43
BRD9-208ENST00000489816 HLA-DMBP28068 263 aa12.36□□□□□ -0.43
BRD9-208ENST00000489816 OR4F17Q8NGA8 305 aa12.36□□□□□ -0.43
BRD9-208ENST00000489816 FMC1Q96HJ9 113 aa12.36□□□□□ -0.43
BRD9-208ENST00000489816 UBTD1Q9HAC8 227 aa12.36□□□□□ -0.43
BRD9-208ENST00000489816 ZNF785A8K8V0 405 aa12.36□□□□□ -0.43
BRD9-208ENST00000489816 C5orf64Q2M2E5 130 aa12.36□□□□□ -0.43
BRD9-208ENST00000489816 SPATA12Q7Z6I5 190 aa12.36□□□□□ -0.43
BRD9-208ENST00000489816 MRPL27Q9P0M9 148 aaKnown RBP12.36□□□□□ -0.43
BRD9-208ENST00000489816 HLA-DRB1P01911 266 aa12.36□□□□□ -0.43
BRD9-208ENST00000489816 ARMS2P0C7Q2 107 aa12.36□□□□□ -0.43
BRD9-208ENST00000489816 FAM120AOSQ5T036 256 aa12.36□□□□□ -0.43
BRD9-208ENST00000489816 URB1-AS1Q96HZ7 61 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms