RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 KNCNA6PVL3 124 aa12.75□□□□□ -0.37
MDC1-206ENST00000489540 ISLRO14498 428 aa12.75□□□□□ -0.37
MDC1-206ENST00000489540 MPC2O95563 127 aa12.75□□□□□ -0.37
MDC1-206ENST00000489540 EWSR1Q01844 656 aaKnown RBP eCLIP12.75□□□□□ -0.37
MDC1-206ENST00000489540 BAXQ07812 192 aa12.75□□□□□ -0.37
MDC1-206ENST00000489540 DEFB135Q30KP9 77 aa12.75□□□□□ -0.37
MDC1-206ENST00000489540 PATE2Q6UY27 113 aa12.75□□□□□ -0.37
MDC1-206ENST00000489540 TRPT1Q86TN4 253 aaKnown RBP12.75□□□□□ -0.37
MDC1-206ENST00000489540 SOCS3O14543 225 aa12.74□□□□□ -0.37
MDC1-206ENST00000489540 MPDU1O75352 247 aa12.74□□□□□ -0.37
MDC1-206ENST00000489540 RPL29P47914 159 aaKnown RBP12.74□□□□□ -0.37
MDC1-206ENST00000489540 TMEM41BQ5BJD5 291 aa12.74□□□□□ -0.37
MDC1-206ENST00000489540 MORN3Q6PF18 240 aaPredicted RBP12.74□□□□□ -0.37
MDC1-206ENST00000489540 GATAD1Q8WUU5 269 aa12.74□□□□□ -0.37
MDC1-206ENST00000489540 C16orf92Q96LL3 132 aa12.74□□□□□ -0.37
MDC1-206ENST00000489540 LINC00052Q96N35 136 aa12.74□□□□□ -0.37
MDC1-206ENST00000489540 UHRF2Q96PU4 802 aa12.74□□□□□ -0.37
MDC1-206ENST00000489540 UBE2L5PA0A1B0GUS4 154 aa12.73□□□□□ -0.37
MDC1-206ENST00000489540 COX7A2P2O60397 106 aa12.73□□□□□ -0.37
MDC1-206ENST00000489540 CA1P00915 261 aaPredicted RBP12.73□□□□□ -0.37
MDC1-206ENST00000489540 SPP1P10451 314 aa12.73□□□□□ -0.37
MDC1-206ENST00000489540 PRR20EP86478 221 aa12.73□□□□□ -0.37
MDC1-206ENST00000489540 PRR20CP86479 221 aa12.73□□□□□ -0.37
MDC1-206ENST00000489540 PRR20DP86480 221 aa12.73□□□□□ -0.37
MDC1-206ENST00000489540 PRR20BP86481 221 aa12.73□□□□□ -0.37
MDC1-206ENST00000489540 PRR20AP86496 221 aa12.73□□□□□ -0.37
MDC1-206ENST00000489540 OR5C1Q8NGR4 320 aa12.73□□□□□ -0.37
MDC1-206ENST00000489540 MED28Q9H204 178 aa12.73□□□□□ -0.37
MDC1-206ENST00000489540 DNAJC4Q9NNZ3 241 aa12.73□□□□□ -0.37
MDC1-206ENST00000489540 ATF4P18848 351 aaPredicted RBP12.72□□□□□ -0.37
MDC1-206ENST00000489540 FGF7P21781 194 aa12.72□□□□□ -0.37
MDC1-206ENST00000489540 C10orf113Q5VZT2 155 aa12.72□□□□□ -0.37
MDC1-206ENST00000489540 MIC13Q5XKP0 118 aa12.72□□□□□ -0.37
MDC1-206ENST00000489540 LINC00305Q7Z4B0 112 aa12.72□□□□□ -0.37
MDC1-206ENST00000489540 OR1L4Q8NGR5 311 aa12.72□□□□□ -0.37
MDC1-206ENST00000489540 IL17DQ8TAD2 202 aa12.72□□□□□ -0.37
MDC1-206ENST00000489540 NBEAL2Q6ZNJ1 2754 aa12.72□□□□□ -0.37
MDC1-206ENST00000489540 TENM3Q9P273 2699 aa12.72□□□□□ -0.37
MDC1-206ENST00000489540 H3BMM0 161 aa12.71□□□□□ -0.37
MDC1-206ENST00000489540 LYL1P12980 280 aa12.71□□□□□ -0.37
MDC1-206ENST00000489540 CXCL3P19876 107 aa12.71□□□□□ -0.37
MDC1-206ENST00000489540 B2MP61769 119 aa12.71□□□□□ -0.37
MDC1-206ENST00000489540 NUTF2P61970 127 aaKnown RBP12.71□□□□□ -0.37
MDC1-206ENST00000489540 SPATA31B1PQ5VZV4 182 aa12.71□□□□□ -0.37
MDC1-206ENST00000489540 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.71□□□□□ -0.37
MDC1-206ENST00000489540 TMEM37Q8WXS4 190 aa12.71□□□□□ -0.37
MDC1-206ENST00000489540 C17orf77Q96MU5 243 aa12.71□□□□□ -0.37
MDC1-206ENST00000489540 SLC39A9Q9NUM3 307 aa12.71□□□□□ -0.37
MDC1-206ENST00000489540 HLA-DRB4P13762 266 aa12.71□□□□□ -0.38
MDC1-206ENST00000489540 OPCMLQ14982 345 aa12.71□□□□□ -0.38
MDC1-206ENST00000489540 FCN2Q15485 313 aa12.71□□□□□ -0.38
MDC1-206ENST00000489540 FOXI2Q6ZQN5 318 aa12.71□□□□□ -0.38
MDC1-206ENST00000489540 PFDN5Q99471 154 aa12.71□□□□□ -0.38
MDC1-206ENST00000489540 HLA-DRB4X5D2U9 266 aa12.71□□□□□ -0.38
MDC1-206ENST00000489540 RPL12P30050 165 aaKnown RBP12.7□□□□□ -0.38
MDC1-206ENST00000489540 CLINT1Q14677 625 aa12.7□□□□□ -0.38
MDC1-206ENST00000489540 EBLN2Q6P2I7 272 aa12.7□□□□□ -0.38
MDC1-206ENST00000489540 THAP6Q8TBB0 222 aa12.7□□□□□ -0.38
MDC1-206ENST00000489540 SAV1Q9H4B6 383 aaPredicted RBP12.7□□□□□ -0.38
MDC1-206ENST00000489540 RPRMQ9NS64 109 aa12.7□□□□□ -0.38
MDC1-206ENST00000489540 MBD2Q9UBB5 411 aa12.7□□□□□ -0.38
MDC1-206ENST00000489540 HSPB11Q9Y547 144 aa12.7□□□□□ -0.38
MDC1-206ENST00000489540 PXMP4Q9Y6I8 212 aa12.7□□□□□ -0.38
MDC1-206ENST00000489540 A0A087X0K7 114 aa12.69□□□□□ -0.38
MDC1-206ENST00000489540 GIG44P09565 113 aaPredicted RBP12.69□□□□□ -0.38
MDC1-206ENST00000489540 FGL1Q08830 312 aa12.69□□□□□ -0.38
MDC1-206ENST00000489540 OXA1LQ15070 435 aa12.69□□□□□ -0.38
MDC1-206ENST00000489540 BPIFA4PQ86YQ2 179 aa12.69□□□□□ -0.38
MDC1-206ENST00000489540 ZNF709Q8N972 641 aa12.69□□□□□ -0.38
MDC1-206ENST00000489540 OR11H7Q8NGC8 314 aa12.69□□□□□ -0.38
MDC1-206ENST00000489540 ASB13Q8WXK3 278 aa12.69□□□□□ -0.38
MDC1-206ENST00000489540 RARRES2Q99969 163 aa12.69□□□□□ -0.38
MDC1-206ENST00000489540 NPCDR1Q9BY65 106 aa12.69□□□□□ -0.38
MDC1-206ENST00000489540 hCG_2014768A0A024R1R8 64 aa12.68□□□□□ -0.38
MDC1-206ENST00000489540 MRPS12O15235 138 aaKnown RBP12.68□□□□□ -0.38
MDC1-206ENST00000489540 LRRC20Q8TCA0 184 aa12.68□□□□□ -0.38
MDC1-206ENST00000489540 CLUHP3Q96NS8 147 aa12.68□□□□□ -0.38
MDC1-206ENST00000489540 ATP5SQ99766 215 aa12.68□□□□□ -0.38
MDC1-206ENST00000489540 C1QTNF4Q9BXJ3 329 aa12.68□□□□□ -0.38
MDC1-206ENST00000489540 WDR61Q9GZS3 305 aaKnown RBP12.68□□□□□ -0.38
MDC1-206ENST00000489540 KCNIP2Q9NS61 270 aa12.68□□□□□ -0.38
MDC1-206ENST00000489540 CASC10Q5T4H9 136 aa12.67□□□□□ -0.38
MDC1-206ENST00000489540 OR11H2Q8NH07 326 aa12.67□□□□□ -0.38
MDC1-206ENST00000489540 C20orf173Q96LM9 149 aa12.67□□□□□ -0.38
MDC1-206ENST00000489540 TRAV8-2A0A0B4J237 113 aa12.66□□□□□ -0.38
MDC1-206ENST00000489540 C17orf112F2Z3M2 114 aa12.66□□□□□ -0.38
MDC1-206ENST00000489540 CXCL2P19875 107 aa12.66□□□□□ -0.38
MDC1-206ENST00000489540 C4BPBP20851 252 aa12.66□□□□□ -0.38
MDC1-206ENST00000489540 GDF5OSQ5U4N7 250 aa12.66□□□□□ -0.38
MDC1-206ENST00000489540 A0A0J9YWU9 116 aa12.65□□□□□ -0.38
MDC1-206ENST00000489540 A0A0J9YX75 114 aa12.65□□□□□ -0.38
MDC1-206ENST00000489540 IFNA5P01569 189 aa12.65□□□□□ -0.38
MDC1-206ENST00000489540 GIPP09681 153 aaPredicted RBP12.65□□□□□ -0.38
MDC1-206ENST00000489540 DEFB1P60022 68 aa12.65□□□□□ -0.38
MDC1-206ENST00000489540 MORN5Q5VZ52 161 aa12.65□□□□□ -0.38
MDC1-206ENST00000489540 OR4B1Q8NGF8 309 aa12.65□□□□□ -0.38
MDC1-206ENST00000489540 SCGB1C1Q8TD33 95 aa12.65□□□□□ -0.38
MDC1-206ENST00000489540 FAM78BQ5VT40 261 aa12.64□□□□□ -0.39
MDC1-206ENST00000489540 LCN15Q6UWW0 184 aa12.64□□□□□ -0.39
MDC1-206ENST00000489540 CSNK1G2-AS1Q8NCQ2 148 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms