RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 ATF4P18848 351 aaPredicted RBP9.82□□□□□ -0.84
CCL28-202ENST00000489442 CAMLGP49069 296 aa9.82□□□□□ -0.84
CCL28-202ENST00000489442 PSMB3P49720 205 aa9.82□□□□□ -0.84
CCL28-202ENST00000489442 PLP1P60201 277 aa9.82□□□□□ -0.84
CCL28-202ENST00000489442 FGL1Q08830 312 aa9.82□□□□□ -0.84
CCL28-202ENST00000489442 TMEM41BQ5BJD5 291 aa9.82□□□□□ -0.84
CCL28-202ENST00000489442 PXDC1Q5TGL8 231 aa9.82□□□□□ -0.84
CCL28-202ENST00000489442 OR11H2Q8NH07 326 aa9.82□□□□□ -0.84
CCL28-202ENST00000489442 UHRF2Q96PU4 802 aa9.82□□□□□ -0.84
CCL28-202ENST00000489442 SHANK2-AS3Q9BTD1 123 aa9.82□□□□□ -0.84
CCL28-202ENST00000489442 SCRT1Q9BWW7 348 aa9.82□□□□□ -0.84
CCL28-202ENST00000489442 SLC25A31Q9H0C2 315 aa9.82□□□□□ -0.84
CCL28-202ENST00000489442 COX7A2P2O60397 106 aa9.81□□□□□ -0.84
CCL28-202ENST00000489442 RPL7P18124 248 aaKnown RBP9.81□□□□□ -0.84
CCL28-202ENST00000489442 BAXQ07812 192 aa9.81□□□□□ -0.84
CCL28-202ENST00000489442 ATP6V1FQ16864 119 aa9.81□□□□□ -0.84
CCL28-202ENST00000489442 Q6ZRG5 221 aa9.81□□□□□ -0.84
CCL28-202ENST00000489442 MGST2Q99735 147 aa9.81□□□□□ -0.84
CCL28-202ENST00000489442 ARV1Q9H2C2 271 aa9.81□□□□□ -0.84
CCL28-202ENST00000489442 UBE2L5PA0A1B0GUS4 154 aa9.8□□□□□ -0.84
CCL28-202ENST00000489442 PTTG1O95997 202 aa9.8□□□□□ -0.84
CCL28-202ENST00000489442 PET100P0DJ07 73 aa9.8□□□□□ -0.84
CCL28-202ENST00000489442 H2BFSP57053 126 aa9.8□□□□□ -0.84
CCL28-202ENST00000489442 EBLN2Q6P2I7 272 aa9.8□□□□□ -0.84
CCL28-202ENST00000489442 LRRC20Q8TCA0 184 aa9.8□□□□□ -0.84
CCL28-202ENST00000489442 PPP1R1CQ8WVI7 109 aa9.8□□□□□ -0.84
CCL28-202ENST00000489442 RPRMQ9NS64 109 aa9.8□□□□□ -0.84
CCL28-202ENST00000489442 WDR83OSQ9Y284 106 aa9.8□□□□□ -0.84
CCL28-202ENST00000489442 ELOA3CA0A087WX78 387 aaPredicted RBP9.79□□□□□ -0.84
CCL28-202ENST00000489442 H3BMM0 161 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 IGKV3-20P01619 116 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 HLA-DRB4P13762 266 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 FGF7P21781 194 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 NHLH2Q02577 135 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 C10orf113Q5VZT2 155 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 PATE2Q6UY27 113 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 FOXI2Q6ZQN5 318 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 LINC00305Q7Z4B0 112 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 OR4B1Q8NGF8 309 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 C1QTNF4Q9BXJ3 329 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 DNAJC4Q9NNZ3 241 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 OR5AC2Q9NZP5 309 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 HLA-DRB4X5D2U9 266 aa9.79□□□□□ -0.84
CCL28-202ENST00000489442 KMT2CQ8NEZ4 4911 aaKnown RBP9.79□□□□□ -0.84
CCL28-202ENST00000489442 SOCS3O14543 225 aa9.78□□□□□ -0.84
CCL28-202ENST00000489442 DEFB1P60022 68 aa9.78□□□□□ -0.84
CCL28-202ENST00000489442 EWSR1Q01844 656 aaKnown RBP eCLIP9.78□□□□□ -0.84
CCL28-202ENST00000489442 VWC2Q2TAL6 325 aa9.78□□□□□ -0.84
CCL28-202ENST00000489442 SPATA31B1PQ5VZV4 182 aa9.78□□□□□ -0.84
CCL28-202ENST00000489442 MIC13Q5XKP0 118 aa9.78□□□□□ -0.84
CCL28-202ENST00000489442 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.78□□□□□ -0.84
CCL28-202ENST00000489442 OR5C1Q8NGR4 320 aa9.78□□□□□ -0.84
CCL28-202ENST00000489442 OR1L4Q8NGR5 311 aa9.78□□□□□ -0.84
CCL28-202ENST00000489442 SAV1Q9H4B6 383 aaPredicted RBP9.78□□□□□ -0.84
CCL28-202ENST00000489442 CLEC5AQ9NY25 188 aa9.78□□□□□ -0.84
CCL28-202ENST00000489442 ALG5Q9Y673 324 aa9.78□□□□□ -0.84
CCL28-202ENST00000489442 CXorf65A6NEN9 183 aa9.77□□□□□ -0.85
CCL28-202ENST00000489442 MPDU1O75352 247 aa9.77□□□□□ -0.85
CCL28-202ENST00000489442 MPC2O95563 127 aa9.77□□□□□ -0.85
CCL28-202ENST00000489442 C4BPBP20851 252 aa9.77□□□□□ -0.85
CCL28-202ENST00000489442 RPL29P47914 159 aaKnown RBP9.77□□□□□ -0.85
CCL28-202ENST00000489442 B2MP61769 119 aa9.77□□□□□ -0.85
CCL28-202ENST00000489442 CLINT1Q14677 625 aa9.77□□□□□ -0.85
CCL28-202ENST00000489442 GDF5OSQ5U4N7 250 aa9.77□□□□□ -0.85
CCL28-202ENST00000489442 BPIFA4PQ86YQ2 179 aa9.77□□□□□ -0.85
CCL28-202ENST00000489442 PFDN5Q99471 154 aa9.77□□□□□ -0.85
CCL28-202ENST00000489442 SLC39A9Q9NUM3 307 aa9.77□□□□□ -0.85
CCL28-202ENST00000489442 XCL2Q9UBD3 114 aa9.77□□□□□ -0.85
CCL28-202ENST00000489442 F6UB75 175 aa9.76□□□□□ -0.85
CCL28-202ENST00000489442 H0YIZ8 118 aa9.76□□□□□ -0.85
CCL28-202ENST00000489442 GIG44P09565 113 aaPredicted RBP9.76□□□□□ -0.85
CCL28-202ENST00000489442 PMS2P11Q13670 270 aa9.76□□□□□ -0.85
CCL28-202ENST00000489442 IGFL4Q6B9Z1 124 aa9.76□□□□□ -0.85
CCL28-202ENST00000489442 TMEM37Q8WXS4 190 aa9.76□□□□□ -0.85
CCL28-202ENST00000489442 STARD9Q9P2P6 4700 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 A0A0J9YX75 114 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 DEFB4AO15263 64 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 FXYD7P58549 80 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 PRR20EP86478 221 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 PRR20CP86479 221 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 PRR20DP86480 221 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 PRR20BP86481 221 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 PRR20AP86496 221 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 OPCMLQ14982 345 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 FAM78BQ5VT40 261 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 RNF182Q8N6D2 247 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 ZNF709Q8N972 641 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 ZNF738Q8NE65 137 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 THAP6Q8TBB0 222 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 C20orf173Q96LM9 149 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 C17orf77Q96MU5 243 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 MED28Q9H204 178 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 PXMP4Q9Y6I8 212 aa9.75□□□□□ -0.85
CCL28-202ENST00000489442 A0A087X0K7 114 aa9.74□□□□□ -0.85
CCL28-202ENST00000489442 SNRPCP09234 159 aaKnown RBP9.74□□□□□ -0.85
CCL28-202ENST00000489442 MIFP14174 115 aa9.74□□□□□ -0.85
CCL28-202ENST00000489442 RPL12P30050 165 aaKnown RBP9.74□□□□□ -0.85
CCL28-202ENST00000489442 PSG9Q00887 426 aa9.74□□□□□ -0.85
CCL28-202ENST00000489442 CHAC2Q8WUX2 184 aa9.74□□□□□ -0.85
CCL28-202ENST00000489442 RNF126Q9BV68 326 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms