RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 ORM2P19652 201 aa8.42□□□□□ -1.06
SFXN3-207ENST00000489434 TSPOP30536 169 aa8.42□□□□□ -1.06
SFXN3-207ENST00000489434 FAUP35544 74 aaKnown RBP8.42□□□□□ -1.06
SFXN3-207ENST00000489434 CNN1P51911 297 aaKnown RBP8.42□□□□□ -1.06
SFXN3-207ENST00000489434 CCL18P55774 89 aa8.42□□□□□ -1.06
SFXN3-207ENST00000489434 AKR1C1Q04828 323 aa8.42□□□□□ -1.06
SFXN3-207ENST00000489434 AMTNQ6UX39 209 aa8.42□□□□□ -1.06
SFXN3-207ENST00000489434 Q6ZNX1 250 aa8.42□□□□□ -1.06
SFXN3-207ENST00000489434 ZBTB8BQ8NAP8 495 aaPredicted RBP8.42□□□□□ -1.06
SFXN3-207ENST00000489434 C20orf173Q96LM9 149 aa8.42□□□□□ -1.06
SFXN3-207ENST00000489434 PPP1R14DQ9NXH3 145 aa8.42□□□□□ -1.06
SFXN3-207ENST00000489434 IGKV1OR2-108A0A075B7D4 117 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 F5H768 121 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 M0R2Z0 102 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 PITX3O75364 302 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 NUDT3O95989 172 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 ATP5G1P05496 136 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 VAMP1P23763 118 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 ATP5G3P48201 142 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 FGL1Q08830 312 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 SPCS2Q15005 226 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 SPINK13Q1W4C9 94 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 TMEM128Q5BJH2 165 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 TMED4Q7Z7H5 227 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 S100A7AQ86SG5 101 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 ZNF738Q8NE65 137 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 OR11H7Q8NGC8 314 aa8.41□□□□□ -1.06
SFXN3-207ENST00000489434 NBDYA0A0U1RRE5 68 aa8.4□□□□□ -1.06
SFXN3-207ENST00000489434 A0A1B0GVG6 124 aa8.4□□□□□ -1.06
SFXN3-207ENST00000489434 SYNGR2O43760 224 aa8.4□□□□□ -1.06
SFXN3-207ENST00000489434 CDK2AP2O75956 126 aa8.4□□□□□ -1.06
SFXN3-207ENST00000489434 AP3S2P59780 193 aa8.4□□□□□ -1.06
SFXN3-207ENST00000489434 RAP2BP61225 183 aa8.4□□□□□ -1.06
SFXN3-207ENST00000489434 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.4□□□□□ -1.06
SFXN3-207ENST00000489434 TMEM256Q8N2U0 113 aa8.4□□□□□ -1.06
SFXN3-207ENST00000489434 C6orf223Q8N319 242 aa8.4□□□□□ -1.06
SFXN3-207ENST00000489434 RAB2BQ8WUD1 216 aa8.4□□□□□ -1.06
SFXN3-207ENST00000489434 LINC01587Q99440 93 aa8.4□□□□□ -1.06
SFXN3-207ENST00000489434 CCDC59Q9P031 241 aaKnown RBP8.4□□□□□ -1.06
SFXN3-207ENST00000489434 FABP12A6NFH5 140 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 CBY3A6NI87 242 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 BOLA2-SMG1P6H3BVE0 249 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 WRBO00258 174 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 RPL7P18124 248 aaKnown RBP8.39□□□□□ -1.07
SFXN3-207ENST00000489434 RHOBP62745 196 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 TNP2Q05952 138 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 CLINT1Q14677 625 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 SPANXN5Q5MJ07 72 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 BAP18Q8IXM2 172 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 RNF182Q8N6D2 247 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 LRTM2Q8N967 370 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 LRRC20Q8TCA0 184 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 RNF24Q9Y225 148 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 HIGD1AQ9Y241 93 aa8.39□□□□□ -1.07
SFXN3-207ENST00000489434 STRAPQ9Y3F4 350 aaKnown RBP8.39□□□□□ -1.07
SFXN3-207ENST00000489434 SMCO3A2RU48 225 aa8.38□□□□□ -1.07
SFXN3-207ENST00000489434 CRXO43186 299 aaPredicted RBP8.38□□□□□ -1.07
SFXN3-207ENST00000489434 NOL3O60936 208 aaKnown RBP8.38□□□□□ -1.07
SFXN3-207ENST00000489434 HYPMO75409 117 aa8.38□□□□□ -1.07
SFXN3-207ENST00000489434 IL5P05113 134 aa8.38□□□□□ -1.07
SFXN3-207ENST00000489434 GATA2P23769 480 aaPredicted RBP8.38□□□□□ -1.07
SFXN3-207ENST00000489434 TAS2R60P59551 318 aa8.38□□□□□ -1.07
SFXN3-207ENST00000489434 HIST1H1AQ02539 215 aaPredicted RBP8.38□□□□□ -1.07
SFXN3-207ENST00000489434 IGFL4Q6B9Z1 124 aa8.38□□□□□ -1.07
SFXN3-207ENST00000489434 ZNRF2Q8NHG8 242 aa8.38□□□□□ -1.07
SFXN3-207ENST00000489434 C16orf74Q96GX8 76 aa8.38□□□□□ -1.07
SFXN3-207ENST00000489434 BCL7BQ9BQE9 202 aa8.38□□□□□ -1.07
SFXN3-207ENST00000489434 SLC25A39Q9BZJ4 359 aaPredicted RBP8.38□□□□□ -1.07
SFXN3-207ENST00000489434 TIMM8BQ9Y5J9 83 aaPredicted RBP8.38□□□□□ -1.07
SFXN3-207ENST00000489434 HSPG2P98160 4391 aa8.38□□□□□ -1.07
SFXN3-207ENST00000489434 TRAV12-2A0A075B6T6 113 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 TRAV8-2A0A0B4J237 113 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 PRM2P04554 102 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 OR5G3P0C626 314 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 HTN1P15515 57 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 SELENOTP62341 195 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 ZNF493Q6ZR52 646 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 ACOT7LQ6ZUV0 252 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 TMEM144Q7Z5S9 345 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 MAPKAPK5-AS1Q8N8E1 139 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 OR8A1Q8NGG7 326 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 DYNC2LI1Q8TCX1 351 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 SLC25A21Q9BQT8 299 aaPredicted RBP8.37□□□□□ -1.07
SFXN3-207ENST00000489434 SHANK2-AS3Q9BTD1 123 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 KRTAP4-5Q9BYR2 181 aa8.37□□□□□ -1.07
SFXN3-207ENST00000489434 PRSS46E5RG02 174 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 H3BP45 60 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 H3BRN7 92 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 ADAP1O75689 374 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 AZU1P20160 251 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 TNFSF8P32971 234 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 TMBIM6P55061 237 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 FCN2Q15485 313 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 TTC32Q5I0X7 151 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 CYP2G1PQ6ZSU1 146 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 TOMM5Q8N4H5 51 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 OR10J6PQ8NGY7 276 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 C17orf77Q96MU5 243 aa8.36□□□□□ -1.07
SFXN3-207ENST00000489434 CCDC160A6NGH7 325 aa8.35□□□□□ -1.07
SFXN3-207ENST00000489434 HOXB5P09067 269 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms