RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 C15orf53Q8NAA6 179 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 OR11H7Q8NGC8 314 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 OR4D5Q8NGN0 318 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 OR1B1Q8NGR6 318 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 TRIM63Q969Q1 353 aa8.74□□□□□ -1.01
CPSF3-204ENST00000489403 SLIRPQ9GZT3 109 aaKnown RBP8.74□□□□□ -1.01
CPSF3-204ENST00000489403 TRAV8-2A0A0B4J237 113 aa8.73□□□□□ -1.01
CPSF3-204ENST00000489403 FABP12A6NFH5 140 aa8.73□□□□□ -1.01
CPSF3-204ENST00000489403 WRBO00258 174 aa8.73□□□□□ -1.01
CPSF3-204ENST00000489403 SYNGR2O43760 224 aa8.73□□□□□ -1.01
CPSF3-204ENST00000489403 INSP01308 110 aa8.73□□□□□ -1.01
CPSF3-204ENST00000489403 VAMP1P23763 118 aa8.73□□□□□ -1.01
CPSF3-204ENST00000489403 TNFSF8P32971 234 aa8.73□□□□□ -1.01
CPSF3-204ENST00000489403 FAUP35544 74 aaKnown RBP8.73□□□□□ -1.01
CPSF3-204ENST00000489403 RPP30P78346 268 aaKnown RBP8.73□□□□□ -1.01
CPSF3-204ENST00000489403 IGFL4Q6B9Z1 124 aa8.73□□□□□ -1.01
CPSF3-204ENST00000489403 BAP18Q8IXM2 172 aa8.73□□□□□ -1.01
CPSF3-204ENST00000489403 BPIFCQ8NFQ6 507 aa8.73□□□□□ -1.01
CPSF3-204ENST00000489403 CIB3Q96Q77 187 aaPredicted RBP8.73□□□□□ -1.01
CPSF3-204ENST00000489403 TMEM147Q9BVK8 224 aa8.73□□□□□ -1.01
CPSF3-204ENST00000489403 KRTAP4-5Q9BYR2 181 aa8.73□□□□□ -1.01
CPSF3-204ENST00000489403 PLAC8L1A1L4L8 177 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 LYRM9A8MSI8 78 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 H3BP45 60 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 H3BRN7 92 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 DUSP14O95147 198 aaKnown RBP8.72□□□□□ -1.01
CPSF3-204ENST00000489403 SFT2D2O95562 160 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 TMBIM6P55061 237 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 FAM3BP58499 235 aaPredicted RBP8.72□□□□□ -1.01
CPSF3-204ENST00000489403 AKR1C1Q04828 323 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 SPANXN5Q5MJ07 72 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 ACOT7LQ6ZUV0 252 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 RNF182Q8N6D2 247 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 GPR82Q96P67 336 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 BCL7BQ9BQE9 202 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 TMED3Q9Y3Q3 217 aa8.72□□□□□ -1.01
CPSF3-204ENST00000489403 TRAV12-2A0A075B6T6 113 aa8.71□□□□□ -1.02
CPSF3-204ENST00000489403 HOXB5P09067 269 aa8.71□□□□□ -1.02
CPSF3-204ENST00000489403 DEFB130BP0DP73 79 aa8.71□□□□□ -1.02
CPSF3-204ENST00000489403 DEFB130AP0DP74 79 aa8.71□□□□□ -1.02
CPSF3-204ENST00000489403 AZU1P20160 251 aa8.71□□□□□ -1.02
CPSF3-204ENST00000489403 TSPOP30536 169 aa8.71□□□□□ -1.02
CPSF3-204ENST00000489403 TNP2Q05952 138 aa8.71□□□□□ -1.02
CPSF3-204ENST00000489403 FGL1Q08830 312 aa8.71□□□□□ -1.02
CPSF3-204ENST00000489403 PPP1R1AQ13522 171 aa8.71□□□□□ -1.02
CPSF3-204ENST00000489403 TOMM5Q8N4H5 51 aa8.71□□□□□ -1.02
CPSF3-204ENST00000489403 ATG101Q9BSB4 218 aa8.71□□□□□ -1.02
CPSF3-204ENST00000489403 SLC25A39Q9BZJ4 359 aaPredicted RBP8.71□□□□□ -1.02
CPSF3-204ENST00000489403 LRP1BQ9NZR2 4599 aa8.7□□□□□ -1.02
CPSF3-204ENST00000489403 H3BMQ9 156 aa8.7□□□□□ -1.02
CPSF3-204ENST00000489403 BOLA2-SMG1P6H3BVE0 249 aa8.7□□□□□ -1.02
CPSF3-204ENST00000489403 S100A7P31151 101 aa8.7□□□□□ -1.02
CPSF3-204ENST00000489403 AP3S2P59780 193 aa8.7□□□□□ -1.02
CPSF3-204ENST00000489403 B2MP61769 119 aa8.7□□□□□ -1.02
CPSF3-204ENST00000489403 FCN2Q15485 313 aa8.7□□□□□ -1.02
CPSF3-204ENST00000489403 CYP2G1PQ6ZSU1 146 aa8.7□□□□□ -1.02
CPSF3-204ENST00000489403 TMEM144Q7Z5S9 345 aa8.7□□□□□ -1.02
CPSF3-204ENST00000489403 ZNF738Q8NE65 137 aa8.7□□□□□ -1.02
CPSF3-204ENST00000489403 ZNRF2Q8NHG8 242 aa8.7□□□□□ -1.02
CPSF3-204ENST00000489403 MCFD2Q8NI22 146 aa8.7□□□□□ -1.02
CPSF3-204ENST00000489403 SLC25A21Q9BQT8 299 aaPredicted RBP8.7□□□□□ -1.02
CPSF3-204ENST00000489403 STRAPQ9Y3F4 350 aaKnown RBP8.7□□□□□ -1.02
CPSF3-204ENST00000489403 NBDYA0A0U1RRE5 68 aa8.69□□□□□ -1.02
CPSF3-204ENST00000489403 SMCO3A2RU48 225 aa8.69□□□□□ -1.02
CPSF3-204ENST00000489403 F5H768 121 aa8.69□□□□□ -1.02
CPSF3-204ENST00000489403 NUDT3O95989 172 aa8.69□□□□□ -1.02
CPSF3-204ENST00000489403 PYDC2Q56P42 97 aa8.69□□□□□ -1.02
CPSF3-204ENST00000489403 SHANK2-AS3Q9BTD1 123 aa8.69□□□□□ -1.02
CPSF3-204ENST00000489403 V9GYH0 126 aa8.69□□□□□ -1.02
CPSF3-204ENST00000489403 A0A087X0K7 114 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 PMS2P5A8MQ11 134 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 NOL3O60936 208 aaKnown RBP8.68□□□□□ -1.02
CPSF3-204ENST00000489403 IL5P05113 134 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 ATP5G1P05496 136 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 PRB4P10163 310 aaPredicted RBP8.68□□□□□ -1.02
CPSF3-204ENST00000489403 RPL7P18124 248 aaKnown RBP8.68□□□□□ -1.02
CPSF3-204ENST00000489403 CXCL3P19876 107 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 ATP5G3P48201 142 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 PLP1P60201 277 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 RAP2BP61225 183 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 POLR2GP62487 172 aaKnown RBP eCLIP8.68□□□□□ -1.02
CPSF3-204ENST00000489403 HIST1H1AQ02539 215 aaPredicted RBP8.68□□□□□ -1.02
CPSF3-204ENST00000489403 LINC01559Q495D7 138 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 C4orf48Q5BLP8 95 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 C6orf223Q8N319 242 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 OR8A1Q8NGG7 326 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 UHRF2Q96PU4 802 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 HIGD1AQ9Y241 93 aa8.68□□□□□ -1.02
CPSF3-204ENST00000489403 C16orf90A8MZG2 172 aa8.67□□□□□ -1.02
CPSF3-204ENST00000489403 HYPMO75409 117 aa8.67□□□□□ -1.02
CPSF3-204ENST00000489403 ADAP1O75689 374 aa8.67□□□□□ -1.02
CPSF3-204ENST00000489403 CCNKO75909 580 aa8.67□□□□□ -1.02
CPSF3-204ENST00000489403 LINC00869P0C866 280 aa8.67□□□□□ -1.02
CPSF3-204ENST00000489403 TAS2R60P59551 318 aa8.67□□□□□ -1.02
CPSF3-204ENST00000489403 RHOBP62745 196 aa8.67□□□□□ -1.02
CPSF3-204ENST00000489403 ID3Q02535 119 aa8.67□□□□□ -1.02
CPSF3-204ENST00000489403 TMEM256Q8N2U0 113 aa8.67□□□□□ -1.02
CPSF3-204ENST00000489403 RNF141Q8WVD5 230 aa8.67□□□□□ -1.02
CPSF3-204ENST00000489403 DEDD2Q8WXF8 326 aa8.67□□□□□ -1.02
CPSF3-204ENST00000489403 C16orf74Q96GX8 76 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms