RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 C20orf173Q96LM9 149 aa6.62□□□□□ -1.35
SNX17-207ENST00000489402 C17orf77Q96MU5 243 aa6.62□□□□□ -1.35
SNX17-207ENST00000489402 CIB3Q96Q77 187 aaPredicted RBP6.62□□□□□ -1.35
SNX17-207ENST00000489402 RSG1Q9BU20 258 aa6.62□□□□□ -1.35
SNX17-207ENST00000489402 TMEM147Q9BVK8 224 aa6.62□□□□□ -1.35
SNX17-207ENST00000489402 SLC25A32Q9H2D1 315 aa6.62□□□□□ -1.35
SNX17-207ENST00000489402 RSL24D1Q9UHA3 163 aaKnown RBP6.62□□□□□ -1.35
SNX17-207ENST00000489402 IGKV1OR2-108A0A075B7D4 117 aa6.61□□□□□ -1.35
SNX17-207ENST00000489402 ZNF98A6NK75 572 aa6.61□□□□□ -1.35
SNX17-207ENST00000489402 A8MTW9 85 aa6.61□□□□□ -1.35
SNX17-207ENST00000489402 ZNF705GA8MUZ8 300 aaPredicted RBP6.61□□□□□ -1.35
SNX17-207ENST00000489402 C16orf90A8MZG2 172 aa6.61□□□□□ -1.35
SNX17-207ENST00000489402 PRB4P10163 310 aaPredicted RBP6.61□□□□□ -1.35
SNX17-207ENST00000489402 ORM2P19652 201 aa6.61□□□□□ -1.35
SNX17-207ENST00000489402 FAUP35544 74 aaKnown RBP6.61□□□□□ -1.35
SNX17-207ENST00000489402 CNN1P51911 297 aaKnown RBP6.61□□□□□ -1.35
SNX17-207ENST00000489402 AKR1C1Q04828 323 aa6.61□□□□□ -1.35
SNX17-207ENST00000489402 SPCS2Q15005 226 aa6.61□□□□□ -1.35
SNX17-207ENST00000489402 SPINK13Q1W4C9 94 aa6.61□□□□□ -1.35
SNX17-207ENST00000489402 AMTNQ6UX39 209 aa6.61□□□□□ -1.35
SNX17-207ENST00000489402 OR11H7Q8NGC8 314 aa6.61□□□□□ -1.35
SNX17-207ENST00000489402 OR4D5Q8NGN0 318 aa6.61□□□□□ -1.35
SNX17-207ENST00000489402 PTTG2Q9NZH5 202 aa6.61□□□□□ -1.35
SNX17-207ENST00000489402 F5H768 121 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 M0R2Z0 102 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 PITX3O75364 302 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 NUDT3O95989 172 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 DEFB130BP0DP73 79 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 DEFB130AP0DP74 79 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 SLC25A6P12236 298 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 VAMP1P23763 118 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 TSPOP30536 169 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 TMBIM6P55061 237 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 FGL1Q08830 312 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 TMEM128Q5BJH2 165 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 TMED4Q7Z7H5 227 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 PPP1R14DQ9NXH3 145 aa6.6□□□□□ -1.35
SNX17-207ENST00000489402 CCDC59Q9P031 241 aaKnown RBP6.6□□□□□ -1.35
SNX17-207ENST00000489402 NBDYA0A0U1RRE5 68 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 BOLA2-SMG1P6H3BVE0 249 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 WRBO00258 174 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 SYNGR2O43760 224 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 ATP5G1P05496 136 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 ATP5G3P48201 142 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 CCL18P55774 89 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 AP3S2P59780 193 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 RAP2BP61225 183 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 TNP2Q05952 138 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 BAP18Q8IXM2 172 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 TMEM256Q8N2U0 113 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 C6orf223Q8N319 242 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 RNF182Q8N6D2 247 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 ZNF738Q8NE65 137 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 BCL7BQ9BQE9 202 aa6.59□□□□□ -1.35
SNX17-207ENST00000489402 SMCO3A2RU48 225 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 FABP12A6NFH5 140 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 CCDC160A6NGH7 325 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 H3BRN7 92 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 CRXO43186 299 aaPredicted RBP6.58□□□□□ -1.36
SNX17-207ENST00000489402 CDK2AP2O75956 126 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 RPL7P18124 248 aaKnown RBP6.58□□□□□ -1.36
SNX17-207ENST00000489402 GATA2P23769 480 aaPredicted RBP6.58□□□□□ -1.36
SNX17-207ENST00000489402 RHOBP62745 196 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 HIST1H1AQ02539 215 aaPredicted RBP6.58□□□□□ -1.36
SNX17-207ENST00000489402 CLINT1Q14677 625 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 SPANXN5Q5MJ07 72 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 IGFL4Q6B9Z1 124 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 TMEM182Q6ZP80 229 aaPredicted RBP6.58□□□□□ -1.36
SNX17-207ENST00000489402 S100A7AQ86SG5 101 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 LRTM2Q8N967 370 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 ZNRF2Q8NHG8 242 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 LRRC20Q8TCA0 184 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 DYNC2LI1Q8TCX1 351 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 RAB2BQ8WUD1 216 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 C16orf74Q96GX8 76 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 LINC01587Q99440 93 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 HIGD1AQ9Y241 93 aa6.58□□□□□ -1.36
SNX17-207ENST00000489402 STRAPQ9Y3F4 350 aaKnown RBP6.58□□□□□ -1.36
SNX17-207ENST00000489402 TRAV12-2A0A075B6T6 113 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 TRAV8-2A0A0B4J237 113 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 CBY3A6NI87 242 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 PRSS46E5RG02 174 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 H3BMQ9 156 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 NOL3O60936 208 aaKnown RBP6.57□□□□□ -1.36
SNX17-207ENST00000489402 IL5P05113 134 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 OR5G3P0C626 314 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 HTN1P15515 57 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 TAS2R60P59551 318 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 CYP2G1PQ6ZSU1 146 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 ACOT7LQ6ZUV0 252 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 TMEM144Q7Z5S9 345 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 TOMM5Q8N4H5 51 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 MAPKAPK5-AS1Q8N8E1 139 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 SHANK2-AS3Q9BTD1 123 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 SLC25A39Q9BZJ4 359 aaPredicted RBP6.57□□□□□ -1.36
SNX17-207ENST00000489402 RNF24Q9Y225 148 aa6.57□□□□□ -1.36
SNX17-207ENST00000489402 TIMM8BQ9Y5J9 83 aaPredicted RBP6.57□□□□□ -1.36
SNX17-207ENST00000489402 PLAC8L1A1L4L8 177 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms