RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 KIFC1Q9BW19 673 aa-1.27□□□□□ -2.61
CBWD1-216ENST00000489272 IMP3Q9NV31 184 aaKnown RBP-1.27□□□□□ -2.61
CBWD1-216ENST00000489272 FGFR1OP2Q9NVK5 253 aa-1.27□□□□□ -2.61
CBWD1-216ENST00000489272 HECW1Q76N89 1606 aa-1.27□□□□□ -2.61
CBWD1-216ENST00000489272 PTPRDP23468 1912 aa-1.27□□□□□ -2.61
CBWD1-216ENST00000489272 COX5BP10606 129 aa-1.28□□□□□ -2.61
CBWD1-216ENST00000489272 SPINK13Q1W4C9 94 aa-1.28□□□□□ -2.61
CBWD1-216ENST00000489272 PPP1R2P1Q96PQ5 205 aa-1.28□□□□□ -2.61
CBWD1-216ENST00000489272 CCDC94Q9BW85 323 aaPredicted RBP-1.28□□□□□ -2.61
CBWD1-216ENST00000489272 BOKQ9UMX3 212 aaPredicted RBP-1.28□□□□□ -2.61
CBWD1-216ENST00000489272 ARHGEF11O15085 1522 aa-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 NEO1Q92859 1461 aa-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 LOC107984156A0A0G2JMH3 177 aa-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 A8MWV9 139 aa-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 M0QZ92 97 aa-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 PIRO00625 290 aa-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 RBP1P09455 135 aa-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 RNASE4P34096 147 aaKnown RBP-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 DEFA1P59665 94 aa-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 EIF3IQ13347 325 aaKnown RBP-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 OGFRL1Q5TC84 451 aaPredicted RBP-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 ARL17AQ8IVW1 177 aa-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 KRT222Q8N1A0 295 aa-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 ZNF75CPQ92670 426 aaPredicted RBP-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 RBBP6Q7Z6E9 1792 aaKnown RBP-1.29□□□□□ -2.62
CBWD1-216ENST00000489272 AKAP6Q13023 2319 aa-1.3□□□□□ -2.62
CBWD1-216ENST00000489272 H0Y980 276 aa-1.3□□□□□ -2.62
CBWD1-216ENST00000489272 CALUO43852 315 aaPredicted RBP-1.3□□□□□ -2.62
CBWD1-216ENST00000489272 CDK6Q00534 326 aa-1.3□□□□□ -2.62
CBWD1-216ENST00000489272 CLEC6AQ6EIG7 209 aa-1.3□□□□□ -2.62
CBWD1-216ENST00000489272 VMO1Q7Z5L0 202 aa-1.3□□□□□ -2.62
CBWD1-216ENST00000489272 OR10K1Q8NGX5 313 aa-1.3□□□□□ -2.62
CBWD1-216ENST00000489272 CCDC90BQ9GZT6 254 aa-1.3□□□□□ -2.62
CBWD1-216ENST00000489272 DRC3Q9H069 523 aa-1.3□□□□□ -2.62
CBWD1-216ENST00000489272 LPAR5Q9H1C0 372 aa-1.3□□□□□ -2.62
CBWD1-216ENST00000489272 FBXO5Q9UKT4 447 aa-1.3□□□□□ -2.62
CBWD1-216ENST00000489272 FASNP49327 2511 aaKnown RBP-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 JMJD1CQ15652 2540 aa-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 SONP18583 2426 aaKnown RBP-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 CNOT1A5YKK6 2376 aaKnown RBP-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 HSBP1L1C9JCN9 74 aa-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 CD79AP11912 226 aa-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 EIF5AP63241 154 aaKnown RBP-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 C8orf74Q6P047 294 aa-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 OR5AS1Q8N127 324 aa-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 C2orf50Q96LR7 162 aa-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 PKIGQ9Y2B9 76 aa-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 SVEP1Q4LDE5 3571 aa-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 RYR2Q92736 4967 aa-1.31□□□□□ -2.62
CBWD1-216ENST00000489272 RFX7Q2KHR2 1363 aa-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 A0A087WSZ3 146 aa-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 LRRN3E7EW58 273 aa-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 SLC16A4O15374 487 aa-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 CYB5BO43169 146 aa-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 OCM2P0CE71 109 aa-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 CAV3P56539 151 aa-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 AP3S2P59780 193 aa-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 RPL37P61927 97 aaKnown RBP-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 RBM3P98179 157 aaKnown RBP-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 CASC2Q6XLA1 102 aa-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 TMEM86BQ8N661 226 aa-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 FAM172AQ8WUF8 416 aa-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 GGACTQ9BVM4 153 aa-1.32□□□□□ -2.62
CBWD1-216ENST00000489272 PKHD1P08F94 4074 aa-1.33□□□□□ -2.62
CBWD1-216ENST00000489272 NBPF19A0A087WUL8 3843 aa-1.33□□□□□ -2.62
CBWD1-216ENST00000489272 OR4C46A6NHA9 309 aa-1.33□□□□□ -2.62
CBWD1-216ENST00000489272 J3QRK9 145 aa-1.33□□□□□ -2.62
CBWD1-216ENST00000489272 SERPINE1P05121 402 aa-1.33□□□□□ -2.62
CBWD1-216ENST00000489272 RAB37Q96AX2 223 aa-1.33□□□□□ -2.62
CBWD1-216ENST00000489272 PLEKHB2Q96CS7 222 aa-1.33□□□□□ -2.62
CBWD1-216ENST00000489272 MUCL1Q96DR8 90 aa-1.33□□□□□ -2.62
CBWD1-216ENST00000489272 MYLKQ15746 1914 aa-1.33□□□□□ -2.62
CBWD1-216ENST00000489272 VWFP04275 2813 aa-1.33□□□□□ -2.62
CBWD1-216ENST00000489272 ERBINQ96RT1 1412 aa-1.33□□□□□ -2.62
CBWD1-216ENST00000489272 LAMA2P24043 3122 aaKnown RBP-1.33□□□□□ -2.62
CBWD1-216ENST00000489272 MYO7AQ13402 2215 aa-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 TEP1Q99973 2627 aaKnown RBP-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 TRGV10A0A0A0MS01 117 aa-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 TRAV26-2A0A0B4J265 109 aa-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 B4DSR2 109 aa-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 SPRR2BP35325 72 aa-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 SPCS3P61009 180 aa-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 C1orf134Q5TEV5 83 aa-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 CD200R1LQ6Q8B3 271 aa-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 PDZD9Q8IXQ8 264 aa-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 SLC25A21Q9BQT8 299 aaPredicted RBP-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 TMEM133Q9H2Q1 129 aa-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 CADP27708 2225 aa-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 WRNQ14191 1432 aaPredicted RBP eCLIP-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 FAT2Q9NYQ8 4349 aa-1.34□□□□□ -2.62
CBWD1-216ENST00000489272 C17orf112F2Z3M2 114 aa-1.35□□□□□ -2.63
CBWD1-216ENST00000489272 DCTN3O75935 186 aa-1.35□□□□□ -2.63
CBWD1-216ENST00000489272 OR7C1O76099 320 aaPredicted RBP-1.35□□□□□ -2.63
CBWD1-216ENST00000489272 SRP14P37108 136 aaKnown RBP-1.35□□□□□ -2.63
CBWD1-216ENST00000489272 SKP1P63208 163 aa-1.35□□□□□ -2.63
CBWD1-216ENST00000489272 CNPY4Q8N129 248 aa-1.35□□□□□ -2.63
CBWD1-216ENST00000489272 RNF122Q9H9V4 155 aa-1.35□□□□□ -2.63
CBWD1-216ENST00000489272 MRPL27Q9P0M9 148 aaKnown RBP-1.35□□□□□ -2.63
CBWD1-216ENST00000489272 HECW2Q9P2P5 1572 aa-1.35□□□□□ -2.63
CBWD1-216ENST00000489272 M0R233 179 aa-1.36□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms