RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 CCNKO75909 580 aa11.23□□□□□ -0.61
ERGIC3-217ENST00000488935 FABP1P07148 127 aa11.23□□□□□ -0.61
ERGIC3-217ENST00000488935 SNRPCP09234 159 aaKnown RBP11.23□□□□□ -0.61
ERGIC3-217ENST00000488935 GALR1P47211 349 aa11.23□□□□□ -0.61
ERGIC3-217ENST00000488935 CNN1P51911 297 aaKnown RBP11.23□□□□□ -0.61
ERGIC3-217ENST00000488935 AKR1C1Q04828 323 aa11.23□□□□□ -0.61
ERGIC3-217ENST00000488935 TMEM128Q5BJH2 165 aa11.23□□□□□ -0.61
ERGIC3-217ENST00000488935 GGNBP1Q5YKI7 109 aa11.23□□□□□ -0.61
ERGIC3-217ENST00000488935 OR11H7Q8NGC8 314 aa11.23□□□□□ -0.61
ERGIC3-217ENST00000488935 SLC25A39Q9BZJ4 359 aaPredicted RBP11.23□□□□□ -0.61
ERGIC3-217ENST00000488935 RABL2AQ9UBK7 228 aaPredicted RBP11.23□□□□□ -0.61
ERGIC3-217ENST00000488935 RABL2BQ9UNT1 228 aa11.23□□□□□ -0.61
ERGIC3-217ENST00000488935 CRXO43186 299 aaPredicted RBP11.22□□□□□ -0.61
ERGIC3-217ENST00000488935 ADAP1O75689 374 aa11.22□□□□□ -0.61
ERGIC3-217ENST00000488935 SFT2D2O95562 160 aa11.22□□□□□ -0.61
ERGIC3-217ENST00000488935 DEFB130BP0DP73 79 aa11.22□□□□□ -0.61
ERGIC3-217ENST00000488935 DEFB130AP0DP74 79 aa11.22□□□□□ -0.61
ERGIC3-217ENST00000488935 ATP5IP56385 69 aaPredicted RBP11.22□□□□□ -0.61
ERGIC3-217ENST00000488935 ACOT7LQ6ZUV0 252 aa11.22□□□□□ -0.61
ERGIC3-217ENST00000488935 TOMM5Q8N4H5 51 aa11.22□□□□□ -0.61
ERGIC3-217ENST00000488935 IGF2BP2-AS1Q96M15 143 aa11.22□□□□□ -0.61
ERGIC3-217ENST00000488935 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
ERGIC3-217ENST00000488935 HSPG2P98160 4391 aa11.21□□□□□ -0.61
ERGIC3-217ENST00000488935 MED14OSP0DP75 135 aa11.21□□□□□ -0.61
ERGIC3-217ENST00000488935 HTN1P15515 57 aa11.21□□□□□ -0.61
ERGIC3-217ENST00000488935 RRAS2P62070 204 aaPredicted RBP11.21□□□□□ -0.61
ERGIC3-217ENST00000488935 POLR2GP62487 172 aaKnown RBP eCLIP11.21□□□□□ -0.61
ERGIC3-217ENST00000488935 BPIFCQ8NFQ6 507 aa11.21□□□□□ -0.61
ERGIC3-217ENST00000488935 UHRF2Q96PU4 802 aa11.21□□□□□ -0.61
ERGIC3-217ENST00000488935 TMEM147Q9BVK8 224 aa11.21□□□□□ -0.61
ERGIC3-217ENST00000488935 V9GYH0 126 aa11.21□□□□□ -0.61
ERGIC3-217ENST00000488935 A8MTW9 85 aa11.2□□□□□ -0.62
ERGIC3-217ENST00000488935 MED6O75586 246 aa11.2□□□□□ -0.62
ERGIC3-217ENST00000488935 FAUP35544 74 aaKnown RBP11.2□□□□□ -0.62
ERGIC3-217ENST00000488935 CNPY1Q3B7I2 92 aa11.2□□□□□ -0.62
ERGIC3-217ENST00000488935 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
ERGIC3-217ENST00000488935 LRTM2Q8N967 370 aa11.2□□□□□ -0.62
ERGIC3-217ENST00000488935 ZNF738Q8NE65 137 aa11.2□□□□□ -0.62
ERGIC3-217ENST00000488935 FLVCR2Q9UPI3 526 aa11.2□□□□□ -0.62
ERGIC3-217ENST00000488935 DUXBA0A1W2PPF3 345 aa11.19□□□□□ -0.62
ERGIC3-217ENST00000488935 S100A5P33763 92 aa11.19□□□□□ -0.62
ERGIC3-217ENST00000488935 MEOX2P50222 304 aa11.19□□□□□ -0.62
ERGIC3-217ENST00000488935 CYP2G1PQ6ZSU1 146 aa11.19□□□□□ -0.62
ERGIC3-217ENST00000488935 STRAPQ9Y3F4 350 aaKnown RBP11.19□□□□□ -0.62
ERGIC3-217ENST00000488935 TMED3Q9Y3Q3 217 aa11.19□□□□□ -0.62
ERGIC3-217ENST00000488935 LINC00854A0A1B0GVQ3 168 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 PLAC8L1A1L4L8 177 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 F5H768 121 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 H3BRN7 92 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 NUDT3O95989 172 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 IL5P05113 134 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 OR5G3P0C626 314 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 SLC25A6P12236 298 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 RHOBP62745 196 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 HIST1H1AQ02539 215 aaPredicted RBP11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 OXA1LQ15070 435 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 C1orf134Q5TEV5 83 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 FAM210BQ96KR6 192 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 CIB3Q96Q77 187 aaPredicted RBP11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 PARD6GQ9BYG4 376 aaPredicted RBP11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 PSENENQ9NZ42 101 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 LRP1BQ9NZR2 4599 aa11.18□□□□□ -0.62
ERGIC3-217ENST00000488935 TEX48A0A1B0GUV7 120 aa11.17□□□□□ -0.62
ERGIC3-217ENST00000488935 H3BTX0 84 aa11.17□□□□□ -0.62
ERGIC3-217ENST00000488935 SSSCA1O60232 199 aa11.17□□□□□ -0.62
ERGIC3-217ENST00000488935 INSP01308 110 aa11.17□□□□□ -0.62
ERGIC3-217ENST00000488935 RPP30P78346 268 aaKnown RBP11.17□□□□□ -0.62
ERGIC3-217ENST00000488935 TNP2Q05952 138 aa11.17□□□□□ -0.62
ERGIC3-217ENST00000488935 KIR3DS1Q14943 382 aa11.17□□□□□ -0.62
ERGIC3-217ENST00000488935 RNF212Q495C1 297 aa11.17□□□□□ -0.62
ERGIC3-217ENST00000488935 LINC01587Q99440 93 aa11.17□□□□□ -0.62
ERGIC3-217ENST00000488935 SHANK2-AS3Q9BTD1 123 aa11.17□□□□□ -0.62
ERGIC3-217ENST00000488935 PTTG2Q9NZH5 202 aa11.17□□□□□ -0.62
ERGIC3-217ENST00000488935 HIGD1AQ9Y241 93 aa11.17□□□□□ -0.62
ERGIC3-217ENST00000488935 C9orf170A2RU37 121 aa11.16□□□□□ -0.62
ERGIC3-217ENST00000488935 PMS2P5A8MQ11 134 aa11.16□□□□□ -0.62
ERGIC3-217ENST00000488935 DUSP14O95147 198 aaKnown RBP11.16□□□□□ -0.62
ERGIC3-217ENST00000488935 CFDP00746 253 aaPredicted RBP11.16□□□□□ -0.62
ERGIC3-217ENST00000488935 METTL15P1P0C7V9 234 aa11.16□□□□□ -0.62
ERGIC3-217ENST00000488935 LINC00869P0C866 280 aa11.16□□□□□ -0.62
ERGIC3-217ENST00000488935 AP3S2P59780 193 aa11.16□□□□□ -0.62
ERGIC3-217ENST00000488935 PATE2Q6UY27 113 aa11.16□□□□□ -0.62
ERGIC3-217ENST00000488935 TMEM144Q7Z5S9 345 aa11.16□□□□□ -0.62
ERGIC3-217ENST00000488935 OR4D5Q8NGN0 318 aa11.16□□□□□ -0.62
ERGIC3-217ENST00000488935 ATG101Q9BSB4 218 aa11.16□□□□□ -0.62
ERGIC3-217ENST00000488935 SLC45A2Q9UMX9 530 aa11.16□□□□□ -0.62
ERGIC3-217ENST00000488935 HYPMO75409 117 aa11.15□□□□□ -0.62
ERGIC3-217ENST00000488935 SCGB1D2O95969 90 aa11.15□□□□□ -0.62
ERGIC3-217ENST00000488935 UBE2MP61081 183 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-217ENST00000488935 RAP2BP61225 183 aa11.15□□□□□ -0.62
ERGIC3-217ENST00000488935 ID3Q02535 119 aa11.15□□□□□ -0.62
ERGIC3-217ENST00000488935 SLC38A11Q08AI6 406 aa11.15□□□□□ -0.62
ERGIC3-217ENST00000488935 SLC25A21Q9BQT8 299 aaPredicted RBP11.15□□□□□ -0.62
ERGIC3-217ENST00000488935 ARL6Q9H0F7 186 aa11.15□□□□□ -0.62
ERGIC3-217ENST00000488935 BOLA2-SMG1P6H3BVE0 249 aa11.14□□□□□ -0.63
ERGIC3-217ENST00000488935 CXCL3P19876 107 aa11.14□□□□□ -0.63
ERGIC3-217ENST00000488935 ARL16Q0P5N6 197 aa11.14□□□□□ -0.63
ERGIC3-217ENST00000488935 PSG3Q16557 428 aa11.14□□□□□ -0.63
ERGIC3-217ENST00000488935 BAK1Q16611 211 aa11.14□□□□□ -0.63
ERGIC3-217ENST00000488935 SAMD13Q5VXD3 122 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms