RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 AQP10Q96PS8 301 aa13.77□□□□□ -0.21
PTCD3-217ENST00000488801 SLC39A9Q9NUM3 307 aa13.77□□□□□ -0.21
PTCD3-217ENST00000488801 LOC102724200A0A096LPH7 203 aaPredicted RBP13.76□□□□□ -0.21
PTCD3-217ENST00000488801 OR5G3P0C626 314 aa13.76□□□□□ -0.21
PTCD3-217ENST00000488801 ZNF688P0C7X2 276 aa13.76□□□□□ -0.21
PTCD3-217ENST00000488801 B2MP61769 119 aa13.76□□□□□ -0.21
PTCD3-217ENST00000488801 PARD6GQ9BYG4 376 aaPredicted RBP13.76□□□□□ -0.21
PTCD3-217ENST00000488801 SLC25A22Q9H936 323 aa13.76□□□□□ -0.21
PTCD3-217ENST00000488801 PXMP4Q9Y6I8 212 aa13.76□□□□□ -0.21
PTCD3-217ENST00000488801 ELOA3CA0A087WX78 387 aaPredicted RBP13.75□□□□□ -0.21
PTCD3-217ENST00000488801 A0A087X0K7 114 aa13.75□□□□□ -0.21
PTCD3-217ENST00000488801 KIR2DL5BA0A0G2JN68 375 aa13.75□□□□□ -0.21
PTCD3-217ENST00000488801 KIR2DL5BA0A0G2JPC4 375 aa13.75□□□□□ -0.21
PTCD3-217ENST00000488801 GALR1P47211 349 aa13.75□□□□□ -0.21
PTCD3-217ENST00000488801 MORN5Q5VZ52 161 aa13.75□□□□□ -0.21
PTCD3-217ENST00000488801 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.75□□□□□ -0.21
PTCD3-217ENST00000488801 LINC00305Q7Z4B0 112 aa13.75□□□□□ -0.21
PTCD3-217ENST00000488801 KIR2DL5AQ8N109 375 aa13.75□□□□□ -0.21
PTCD3-217ENST00000488801 KIR2DL5BQ8NHK3 375 aa13.75□□□□□ -0.21
PTCD3-217ENST00000488801 SPATA25Q9BR10 227 aa13.75□□□□□ -0.21
PTCD3-217ENST00000488801 WFDC1Q9HC57 220 aa13.75□□□□□ -0.21
PTCD3-217ENST00000488801 U3KQK5 164 aa13.75□□□□□ -0.21
PTCD3-217ENST00000488801 RPL7P18124 248 aaKnown RBP13.74□□□□□ -0.21
PTCD3-217ENST00000488801 PSMB3P49720 205 aa13.74□□□□□ -0.21
PTCD3-217ENST00000488801 MEOX2P50222 304 aa13.74□□□□□ -0.21
PTCD3-217ENST00000488801 SAMD13Q5VXD3 122 aa13.74□□□□□ -0.21
PTCD3-217ENST00000488801 C10orf113Q5VZT2 155 aa13.74□□□□□ -0.21
PTCD3-217ENST00000488801 S100A7AQ86SG5 101 aa13.74□□□□□ -0.21
PTCD3-217ENST00000488801 RNF222A6NCQ9 220 aa13.73□□□□□ -0.21
PTCD3-217ENST00000488801 ISLRO14498 428 aa13.73□□□□□ -0.21
PTCD3-217ENST00000488801 COX7A2P2O60397 106 aa13.73□□□□□ -0.21
PTCD3-217ENST00000488801 Q6ZRG5 221 aa13.73□□□□□ -0.21
PTCD3-217ENST00000488801 OR1L4Q8NGR5 311 aa13.73□□□□□ -0.21
PTCD3-217ENST00000488801 OR2T35Q8NGX2 323 aa13.73□□□□□ -0.21
PTCD3-217ENST00000488801 RCHY1Q96PM5 261 aa13.73□□□□□ -0.21
PTCD3-217ENST00000488801 PFDN5Q99471 154 aa13.73□□□□□ -0.21
PTCD3-217ENST00000488801 DNAJC4Q9NNZ3 241 aa13.73□□□□□ -0.21
PTCD3-217ENST00000488801 RNF24Q9Y225 148 aa13.73□□□□□ -0.21
PTCD3-217ENST00000488801 SNRPD3P62318 126 aaKnown RBP13.72□□□□□ -0.21
PTCD3-217ENST00000488801 PSMG4Q5JS54 123 aa13.72□□□□□ -0.21
PTCD3-217ENST00000488801 TRPT1Q86TN4 253 aaKnown RBP13.72□□□□□ -0.21
PTCD3-217ENST00000488801 GATAD1Q8WUU5 269 aa13.72□□□□□ -0.21
PTCD3-217ENST00000488801 SMIM3Q9BZL3 60 aa13.72□□□□□ -0.21
PTCD3-217ENST00000488801 ZMAT4Q9H898 229 aa13.72□□□□□ -0.21
PTCD3-217ENST00000488801 KCNIP2Q9NS61 270 aa13.72□□□□□ -0.21
PTCD3-217ENST00000488801 TNFSF18Q9UNG2 199 aa13.72□□□□□ -0.21
PTCD3-217ENST00000488801 APOC4P55056 127 aa13.71□□□□□ -0.21
PTCD3-217ENST00000488801 RSG1Q9BU20 258 aa13.71□□□□□ -0.21
PTCD3-217ENST00000488801 TRAV8-2A0A0B4J237 113 aa13.7□□□□□ -0.22
PTCD3-217ENST00000488801 UBE2CO00762 179 aa13.7□□□□□ -0.22
PTCD3-217ENST00000488801 RPL35AP18077 110 aaKnown RBP13.7□□□□□ -0.22
PTCD3-217ENST00000488801 GCSAMLQ5JQS6 135 aa13.7□□□□□ -0.22
PTCD3-217ENST00000488801 Q6ZNX1 250 aa13.7□□□□□ -0.22
PTCD3-217ENST00000488801 Q6ZWC4 215 aa13.7□□□□□ -0.22
PTCD3-217ENST00000488801 C20orf173Q96LM9 149 aa13.7□□□□□ -0.22
PTCD3-217ENST00000488801 RETNQ9HD89 108 aa13.7□□□□□ -0.22
PTCD3-217ENST00000488801 IGLC2P0DOY2 106 aa13.69□□□□□ -0.22
PTCD3-217ENST00000488801 CXCL2P19875 107 aa13.69□□□□□ -0.22
PTCD3-217ENST00000488801 KNCNA6PVL3 124 aa13.68□□□□□ -0.22
PTCD3-217ENST00000488801 C17orf112F2Z3M2 114 aa13.68□□□□□ -0.22
PTCD3-217ENST00000488801 HLA-DRB4P13762 266 aa13.68□□□□□ -0.22
PTCD3-217ENST00000488801 ATF4P18848 351 aaPredicted RBP13.68□□□□□ -0.22
PTCD3-217ENST00000488801 ID1P41134 155 aa13.68□□□□□ -0.22
PTCD3-217ENST00000488801 BPIFA4PQ86YQ2 179 aa13.68□□□□□ -0.22
PTCD3-217ENST00000488801 SAV1Q9H4B6 383 aaPredicted RBP13.68□□□□□ -0.22
PTCD3-217ENST00000488801 TP53TG1Q9Y2A0 90 aa13.68□□□□□ -0.22
PTCD3-217ENST00000488801 HLA-DRB4X5D2U9 266 aa13.68□□□□□ -0.22
PTCD3-217ENST00000488801 FXYD6-FXYD2A0A087WZ82 144 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 TRAV5A0A0B4J249 113 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 A8MTW9 85 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 H3BMM0 161 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 IFNA5P01569 189 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 GIG44P09565 113 aaPredicted RBP13.67□□□□□ -0.22
PTCD3-217ENST00000488801 GDF5OSQ5U4N7 250 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 FOXI2Q6ZQN5 318 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 STHQ8IWL8 128 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 ZNF709Q8N972 641 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 FAM167A-AS1Q96KT0 104 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 CLUHP3Q96NS8 147 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 HRH4Q9H3N8 390 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 TMEM14CQ9P0S9 112 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 TIMM9Q9Y5J7 89 aa13.67□□□□□ -0.22
PTCD3-217ENST00000488801 DEFB1P60022 68 aa13.66□□□□□ -0.22
PTCD3-217ENST00000488801 ZNF266Q14584 549 aa13.66□□□□□ -0.22
PTCD3-217ENST00000488801 ACTL10Q5JWF8 245 aa13.66□□□□□ -0.22
PTCD3-217ENST00000488801 LCN15Q6UWW0 184 aa13.66□□□□□ -0.22
PTCD3-217ENST00000488801 C16orf92Q96LL3 132 aa13.66□□□□□ -0.22
PTCD3-217ENST00000488801 MRPL32Q9BYC8 188 aaKnown RBP13.66□□□□□ -0.22
PTCD3-217ENST00000488801 CSTL1Q9H114 145 aa13.66□□□□□ -0.22
PTCD3-217ENST00000488801 EDA2RQ9HAV5 297 aa13.66□□□□□ -0.22
PTCD3-217ENST00000488801 H3BQ15 152 aa13.65□□□□□ -0.22
PTCD3-217ENST00000488801 SPP1P10451 314 aa13.65□□□□□ -0.22
PTCD3-217ENST00000488801 C4BPBP20851 252 aa13.65□□□□□ -0.22
PTCD3-217ENST00000488801 DEFB135Q30KP9 77 aa13.65□□□□□ -0.22
PTCD3-217ENST00000488801 SPATA31B1PQ5VZV4 182 aa13.65□□□□□ -0.22
PTCD3-217ENST00000488801 INO80EQ8NBZ0 244 aaPredicted RBP13.65□□□□□ -0.22
PTCD3-217ENST00000488801 SCGB1C1Q8TD33 95 aa13.65□□□□□ -0.22
PTCD3-217ENST00000488801 RNF183Q96D59 192 aa13.65□□□□□ -0.22
PTCD3-217ENST00000488801 SAT2Q96F10 170 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms