RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 M0R2T5 61 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 CXCR6O00574 342 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 RER1O15258 196 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 COX7A2P2O60397 106 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 PTTG1O95997 202 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 HLA-AP01891 365 aaKnown RBP1.67□□□□□ -2.14
ITGB1-214ENST00000488427 PYCR1P32322 319 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 MAGEA6P43360 314 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 HOXC5Q00444 222 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 DEFA5Q01523 94 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 INSL4Q14641 139 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 SSX1Q16384 188 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 IMPG1Q17R60 797 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 LIN52Q52LA3 116 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 GLYATL3Q5SZD4 288 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 LAMTOR1Q6IAA8 161 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 OR10K2Q6IF99 312 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 HAGHLQ6PII5 290 aaPredicted RBP1.67□□□□□ -2.14
ITGB1-214ENST00000488427 OR6V1Q8N148 313 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 C1orf158Q8N1D5 194 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 CCNYL1Q8N7R7 359 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 LFNGQ8NES3 379 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 C1orf54Q8WWF1 131 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.67□□□□□ -2.14
ITGB1-214ENST00000488427 C20orf166-AS1Q96NR2 134 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 ZNF251Q9BRH9 671 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 FAM103A1Q9BTL3 118 aaKnown RBP1.67□□□□□ -2.14
ITGB1-214ENST00000488427 CACYBPQ9HB71 228 aaKnown RBP1.67□□□□□ -2.14
ITGB1-214ENST00000488427 SLC22A13Q9Y226 551 aa1.67□□□□□ -2.14
ITGB1-214ENST00000488427 MUC12Q9UKN1 5478 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 IGHV3-43A0A0B4J1X8 118 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 FAM240AA0A1B0GVK7 77 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 A8MWP6 167 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 F5H768 121 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 M0R135 149 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 ZNF737O75373 536 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 IGHV3-7P01780 117 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 IGKV1-16P04430 117 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 SCGB1C2P0DMR2 95 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 IFI30P13284 250 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 MAGEA2P43356 314 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 MAGEA3P43357 314 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 GNG10P50151 68 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 HADHBP55084 474 aaKnown RBP1.66□□□□□ -2.14
ITGB1-214ENST00000488427 LSM6P62312 80 aaKnown RBP1.66□□□□□ -2.14
ITGB1-214ENST00000488427 GRK1Q15835 563 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 SNCBQ16143 134 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 ATP6V1FQ16864 119 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 ESRGQ1W209 222 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 RPS27LQ71UM5 84 aaKnown RBP1.66□□□□□ -2.14
ITGB1-214ENST00000488427 NAA40Q86UY6 237 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 MSRB3Q8IXL7 192 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 OR4B1Q8NGF8 309 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 SCGB1C1Q8TD33 95 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 RASSF5Q8WWW0 418 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 LEAP2Q969E1 77 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 USMG5Q96IX5 58 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 TRNT1Q96Q11 434 aaKnown RBP1.66□□□□□ -2.14
ITGB1-214ENST00000488427 PBOV1Q9GZY1 135 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 SLC2A9Q9NRM0 540 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 STK38LQ9Y2H1 464 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 ATP6V1DQ9Y5K8 247 aa1.66□□□□□ -2.14
ITGB1-214ENST00000488427 A0A0B4J2C4 111 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 PPP5D1E7EU14 171 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 G3V3Q6 166 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 GGCTO75223 188 aaKnown RBP1.65□□□□□ -2.15
ITGB1-214ENST00000488427 RPS17P08708 135 aaKnown RBP1.65□□□□□ -2.15
ITGB1-214ENST00000488427 CGB7P0DN87 165 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 NCALDP61601 193 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 CNBPP62633 177 aaKnown RBP1.65□□□□□ -2.15
ITGB1-214ENST00000488427 RPL18Q07020 188 aaKnown RBP1.65□□□□□ -2.15
ITGB1-214ENST00000488427 CIRBPQ14011 172 aaKnown RBP1.65□□□□□ -2.15
ITGB1-214ENST00000488427 PLGLAQ15195 96 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 TNXAQ16473 311 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 KRTAP13-4Q3LI77 160 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 FAM162BQ5T6X4 162 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 LRRC34Q8IZ02 419 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 DRAXINQ8NBI3 349 aaPredicted RBP1.65□□□□□ -2.15
ITGB1-214ENST00000488427 AQP3Q92482 292 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 SPTSSAQ969W0 71 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 CHST6Q9GZX3 395 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 GABARAPL1Q9H0R8 117 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 TVP23BQ9NYZ1 205 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 MRPL27Q9P0M9 148 aaKnown RBP1.65□□□□□ -2.15
ITGB1-214ENST00000488427 RHBDD3Q9Y3P4 386 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 MPC1Q9Y5U8 109 aa1.65□□□□□ -2.15
ITGB1-214ENST00000488427 A0A1B0GU33 70 aa1.64□□□□□ -2.15
ITGB1-214ENST00000488427 LOC389332A0A1B0GUA5 103 aa1.64□□□□□ -2.15
ITGB1-214ENST00000488427 A0A1W2PNM2 257 aa1.64□□□□□ -2.15
ITGB1-214ENST00000488427 SMIM23A6NLE4 172 aa1.64□□□□□ -2.15
ITGB1-214ENST00000488427 HMGN4O00479 90 aa1.64□□□□□ -2.15
ITGB1-214ENST00000488427 KPNA4O00629 521 aaPredicted RBP1.64□□□□□ -2.15
ITGB1-214ENST00000488427 BANF1O75531 89 aa1.64□□□□□ -2.15
ITGB1-214ENST00000488427 IGLV3-1P01715 115 aa1.64□□□□□ -2.15
ITGB1-214ENST00000488427 ASAH2BP0C7U1 165 aa1.64□□□□□ -2.15
ITGB1-214ENST00000488427 C8orf88P0DMB2 117 aa1.64□□□□□ -2.15
ITGB1-214ENST00000488427 ERP29P30040 261 aaKnown RBP1.64□□□□□ -2.15
ITGB1-214ENST00000488427 GNG3P63215 75 aa1.64□□□□□ -2.15
ITGB1-214ENST00000488427 HIST1H3AP68431 136 aa1.64□□□□□ -2.15
ITGB1-214ENST00000488427 FAM3AP98173 230 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms