RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 B2MP61769 119 aa12.7□□□□□ -0.38
SHROOM1-205ENST00000488072 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.7□□□□□ -0.38
SHROOM1-205ENST00000488072 LINC00322Q6ZN03 302 aaPredicted RBP12.7□□□□□ -0.38
SHROOM1-205ENST00000488072 LINC00305Q7Z4B0 112 aa12.7□□□□□ -0.38
SHROOM1-205ENST00000488072 AQP10Q96PS8 301 aa12.7□□□□□ -0.38
SHROOM1-205ENST00000488072 RETNQ9HD89 108 aa12.7□□□□□ -0.38
SHROOM1-205ENST00000488072 SOCS3O14543 225 aa12.69□□□□□ -0.38
SHROOM1-205ENST00000488072 MRPS12O15235 138 aaKnown RBP12.69□□□□□ -0.38
SHROOM1-205ENST00000488072 PAFAH1B2P68402 229 aa12.69□□□□□ -0.38
SHROOM1-205ENST00000488072 CD300CQ08708 224 aa12.69□□□□□ -0.38
SHROOM1-205ENST00000488072 RAB31Q13636 194 aa12.69□□□□□ -0.38
SHROOM1-205ENST00000488072 HAGHQ16775 308 aa12.69□□□□□ -0.38
SHROOM1-205ENST00000488072 ST6GAL2Q96JF0 529 aa12.69□□□□□ -0.38
SHROOM1-205ENST00000488072 C20orf173Q96LM9 149 aa12.69□□□□□ -0.38
SHROOM1-205ENST00000488072 ARPC5O15511 151 aa12.68□□□□□ -0.38
SHROOM1-205ENST00000488072 HLA-DMBP28068 263 aa12.68□□□□□ -0.38
SHROOM1-205ENST00000488072 FGL1Q08830 312 aa12.68□□□□□ -0.38
SHROOM1-205ENST00000488072 PSMG4Q5JS54 123 aa12.68□□□□□ -0.38
SHROOM1-205ENST00000488072 C10orf113Q5VZT2 155 aa12.68□□□□□ -0.38
SHROOM1-205ENST00000488072 DNAJC4Q9NNZ3 241 aa12.68□□□□□ -0.38
SHROOM1-205ENST00000488072 NRN1Q9NPD7 142 aa12.68□□□□□ -0.38
SHROOM1-205ENST00000488072 TGP01266 2768 aa12.67□□□□□ -0.38
SHROOM1-205ENST00000488072 TRAV8-2A0A0B4J237 113 aa12.67□□□□□ -0.38
SHROOM1-205ENST00000488072 A8MZ25 164 aa12.67□□□□□ -0.38
SHROOM1-205ENST00000488072 C1orf194Q5T5A4 169 aa12.67□□□□□ -0.38
SHROOM1-205ENST00000488072 MIR17HGQ75NE6 70 aa12.67□□□□□ -0.38
SHROOM1-205ENST00000488072 ASB13Q8WXK3 278 aa12.67□□□□□ -0.38
SHROOM1-205ENST00000488072 IFNA5P01569 189 aa12.66□□□□□ -0.38
SHROOM1-205ENST00000488072 CD5P06127 495 aa12.66□□□□□ -0.38
SHROOM1-205ENST00000488072 GDF5OSQ5U4N7 250 aa12.66□□□□□ -0.38
SHROOM1-205ENST00000488072 RPL7L1Q6DKI1 246 aaKnown RBP12.66□□□□□ -0.38
SHROOM1-205ENST00000488072 Q6ZRG5 221 aa12.66□□□□□ -0.38
SHROOM1-205ENST00000488072 HSD17B11Q8NBQ5 300 aa12.66□□□□□ -0.38
SHROOM1-205ENST00000488072 LINC00052Q96N35 136 aa12.66□□□□□ -0.38
SHROOM1-205ENST00000488072 SEPSECSQ9HD40 501 aaKnown RBP12.66□□□□□ -0.38
SHROOM1-205ENST00000488072 TRAV2A0A0B4J234 112 aa12.65□□□□□ -0.38
SHROOM1-205ENST00000488072 F6UB75 175 aa12.65□□□□□ -0.38
SHROOM1-205ENST00000488072 H3BQ15 152 aa12.65□□□□□ -0.38
SHROOM1-205ENST00000488072 FFAR4Q5NUL3 377 aa12.65□□□□□ -0.38
SHROOM1-205ENST00000488072 RNF182Q8N6D2 247 aa12.65□□□□□ -0.38
SHROOM1-205ENST00000488072 SCGB1C1Q8TD33 95 aa12.65□□□□□ -0.38
SHROOM1-205ENST00000488072 SH3BGRL3Q9H299 93 aa12.65□□□□□ -0.38
SHROOM1-205ENST00000488072 MPDU1O75352 247 aa12.64□□□□□ -0.39
SHROOM1-205ENST00000488072 CXCL2P19875 107 aa12.64□□□□□ -0.39
SHROOM1-205ENST00000488072 NUP62P37198 522 aaPredicted RBP12.64□□□□□ -0.39
SHROOM1-205ENST00000488072 GALR1P47211 349 aa12.64□□□□□ -0.39
SHROOM1-205ENST00000488072 PXDC1Q5TGL8 231 aa12.64□□□□□ -0.39
SHROOM1-205ENST00000488072 ZNF709Q8N972 641 aa12.64□□□□□ -0.39
SHROOM1-205ENST00000488072 INO80EQ8NBZ0 244 aaPredicted RBP12.64□□□□□ -0.39
SHROOM1-205ENST00000488072 OR1L4Q8NGR5 311 aa12.64□□□□□ -0.39
SHROOM1-205ENST00000488072 FAM110AQ9BQ89 295 aa12.64□□□□□ -0.39
SHROOM1-205ENST00000488072 CYTL1Q9NRR1 136 aa12.64□□□□□ -0.39
SHROOM1-205ENST00000488072 PFDN2Q9UHV9 154 aa12.64□□□□□ -0.39
SHROOM1-205ENST00000488072 SLC17A3O00476 420 aa12.63□□□□□ -0.39
SHROOM1-205ENST00000488072 PYYP10082 97 aa12.63□□□□□ -0.39
SHROOM1-205ENST00000488072 RAB2AP61019 212 aa12.63□□□□□ -0.39
SHROOM1-205ENST00000488072 ACTL10Q5JWF8 245 aa12.63□□□□□ -0.39
SHROOM1-205ENST00000488072 FAM78BQ5VT40 261 aa12.63□□□□□ -0.39
SHROOM1-205ENST00000488072 FAM167A-AS1Q96KT0 104 aa12.63□□□□□ -0.39
SHROOM1-205ENST00000488072 SLC25A2Q9BXI2 301 aa12.63□□□□□ -0.39
SHROOM1-205ENST00000488072 MFFQ9GZY8 342 aa12.63□□□□□ -0.39
SHROOM1-205ENST00000488072 ELOA3CA0A087WX78 387 aaPredicted RBP12.62□□□□□ -0.39
SHROOM1-205ENST00000488072 LOC102724200A0A096LPH7 203 aaPredicted RBP12.62□□□□□ -0.39
SHROOM1-205ENST00000488072 ATF4P18848 351 aaPredicted RBP12.62□□□□□ -0.39
SHROOM1-205ENST00000488072 ATP6V0CP27449 155 aa12.62□□□□□ -0.39
SHROOM1-205ENST00000488072 C16orf92Q96LL3 132 aa12.62□□□□□ -0.39
SHROOM1-205ENST00000488072 IGKV3-20P01619 116 aa12.61□□□□□ -0.39
SHROOM1-205ENST00000488072 ZNF705DP0CH99 300 aaPredicted RBP12.61□□□□□ -0.39
SHROOM1-205ENST00000488072 ZNF705BP0CI00 300 aaPredicted RBP12.61□□□□□ -0.39
SHROOM1-205ENST00000488072 RPL7P18124 248 aaKnown RBP12.61□□□□□ -0.39
SHROOM1-205ENST00000488072 ZNF503Q96F45 646 aa12.61□□□□□ -0.39
SHROOM1-205ENST00000488072 TM2D3Q9BRN9 247 aa12.61□□□□□ -0.39
SHROOM1-205ENST00000488072 PARD6GQ9BYG4 376 aaPredicted RBP12.61□□□□□ -0.39
SHROOM1-205ENST00000488072 ZNF586Q9NXT0 402 aa12.61□□□□□ -0.39
SHROOM1-205ENST00000488072 AGRNO00468 2067 aa12.61□□□□□ -0.39
SHROOM1-205ENST00000488072 TENM3Q9P273 2699 aa12.6□□□□□ -0.39
SHROOM1-205ENST00000488072 C17orf112F2Z3M2 114 aa12.6□□□□□ -0.39
SHROOM1-205ENST00000488072 HMGB3O15347 200 aaKnown RBP12.6□□□□□ -0.39
SHROOM1-205ENST00000488072 IGLC2P0DOY2 106 aa12.6□□□□□ -0.39
SHROOM1-205ENST00000488072 GATAD1Q8WUU5 269 aa12.6□□□□□ -0.39
SHROOM1-205ENST00000488072 PFDN5Q99471 154 aa12.6□□□□□ -0.39
SHROOM1-205ENST00000488072 A0A087X0K7 114 aa12.59□□□□□ -0.39
SHROOM1-205ENST00000488072 ZNF705FA8MVS1 300 aaPredicted RBP12.59□□□□□ -0.39
SHROOM1-205ENST00000488072 GIG44P09565 113 aaPredicted RBP12.59□□□□□ -0.39
SHROOM1-205ENST00000488072 FXYD7P58549 80 aa12.59□□□□□ -0.39
SHROOM1-205ENST00000488072 FAM122CQ6P4D5 195 aa12.59□□□□□ -0.39
SHROOM1-205ENST00000488072 TRPT1Q86TN4 253 aaKnown RBP12.59□□□□□ -0.39
SHROOM1-205ENST00000488072 GPR82Q96P67 336 aa12.59□□□□□ -0.39
SHROOM1-205ENST00000488072 PLA2G2EQ9NZK7 142 aa12.59□□□□□ -0.39
SHROOM1-205ENST00000488072 PRAC2D3DTV9 90 aa12.58□□□□□ -0.4
SHROOM1-205ENST00000488072 C4BPBP20851 252 aa12.58□□□□□ -0.4
SHROOM1-205ENST00000488072 PSMB3P49720 205 aa12.58□□□□□ -0.4
SHROOM1-205ENST00000488072 CMC4P56277 68 aaPredicted RBP12.58□□□□□ -0.4
SHROOM1-205ENST00000488072 SNRPD3P62318 126 aaKnown RBP12.58□□□□□ -0.4
SHROOM1-205ENST00000488072 COL7A1Q02388 2944 aa12.58□□□□□ -0.4
SHROOM1-205ENST00000488072 BPIFA4PQ86YQ2 179 aa12.58□□□□□ -0.4
SHROOM1-205ENST00000488072 KCNRGQ8N5I3 272 aa12.58□□□□□ -0.4
SHROOM1-205ENST00000488072 SAT2Q96F10 170 aaPredicted RBP12.58□□□□□ -0.4
SHROOM1-205ENST00000488072 FUT9Q9Y231 359 aa12.58□□□□□ -0.4
SHROOM1-205ENST00000488072 HMSDA8MTL9 139 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms