RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 WIZO95785 1651 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 USP54Q70EL1 1684 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 RREB1Q92766 1687 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 KIF21BO75037 1637 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 HECW1Q76N89 1606 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 TRPM1Q7Z4N2 1603 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ADCY10Q96PN6 1610 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 CICQ96RK0 1608 aaPredicted RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PTPN23Q9H3S7 1636 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 CC2D2AQ9P2K1 1620 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ALKQ9UM73 1620 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 BIVM-ERCC5R4GMW8 1640 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 SSC5DA1L4H1 1573 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 UNC13BO14795 1591 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 SYNMO15061 1565 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 SMARCA2P51531 1590 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ABCC8Q09428 1581 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 TIAM1Q13009 1591 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 DUOX1Q9NRD9 1551 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 BICRAQ9NZM4 1560 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 DIP2CQ9Y2E4 1556 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 SSPOA2VEC9 5147 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 TRPM2O94759 1503 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 ABCC6O95255 1503 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 URB2Q14146 1524 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.03□□□□□ -2.418e-10■■■■□ 19.5
SMC4-219ENST00000487747 KIAA0586Q9BVV6 1533 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 FAM135AQ9P2D6 1515 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 A2ML1A8K2U0 1454 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 FANCD2Q9BXW9 1451 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 FGD6Q6ZV73 1430 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 DOCK5Q9H7D0 1870 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 HSPG2P98160 4391 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 XRN1Q8IZH2 1706 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 IGLV5-48A0A075B6I7 105 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 A0A087WSZ3 146 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 A0A0A6YYH2 397 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TRBV7-6A0A0J9YX20 115 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TRBV6-1A0A0K0K1D8 114 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 LOC105371267A0A1B0GV96 52 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 LINC00854A0A1B0GVQ3 168 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 A6NJ64 397 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 IGIPA6NJ69 53 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 FAM159BA6NKW6 160 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 ZNF736B4DX44 427 aaPredicted RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 EEF1E1-BLOC1S5C9J1V9 151 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 K7EIL1 84 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 K7EIM0 57 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 FXYD1O00168 92 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 PIRO00625 290 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CDC42EP2O14613 210 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SLC16A4O15374 487 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 PIN1P1O15428 100 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 DLEU1O43261 78 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 KLF7O75840 302 aaPredicted RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 OR2B3O76000 313 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CST7O76096 145 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 ZNF682O95780 498 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 APOEP02649 317 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 IFNA6P05013 189 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 C8GP07360 202 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SERPINA6P08185 405 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 OR10J4P0C629 311 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SMIM10L2AP0DMW4 78 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SMIM10L2BP0DMW5 78 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CD79AP11912 226 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 COX6B1P14854 86 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 FGF7P21781 194 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SPRR2EP22531 72 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 ERP29P30040 261 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SPRR2AP35326 72 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 RPS27P42677 84 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 MAGEA2P43356 314 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 RPL5P46777 297 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 DYNLT3P51808 116 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 NKX2-5P52952 324 aaPredicted RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CRYBA4P53673 196 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 POLR2KP53803 58 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 FXYD6P3P58550 94 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 PSME3P61289 254 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 B2MP61769 119 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 RPS29P62273 56 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SNRPD2P62316 118 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 MRPS25P82663 173 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SARNPP82979 210 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 RBM3P98179 157 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TFF3Q07654 80 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 KLRD1Q13241 179 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 DIAPH2-AS1Q14236 149 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 MSMO1Q15800 293 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 DEFB114Q30KQ6 69 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 DEFB113Q30KQ7 82 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP6-2Q3LI66 62 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TDRG1Q3Y452 100 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CCSMST1Q4G0I0 132 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 LINC01590Q5TEZ4 76 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 LPCAT4Q643R3 524 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SPOPLQ6IQ16 392 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 C22orf39Q6P5X5 142 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms