RNA–Protein interactions for RNA: ENST00000487201.1

RHBDF1-210, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 1,708 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-210ENST00000487201 SHANK2-AS3Q9BTD1 123 aa16.7■□□□□ 0.26
RHBDF1-210ENST00000487201 SCRT1Q9BWW7 348 aa16.7■□□□□ 0.26
RHBDF1-210ENST00000487201 PFDN2Q9UHV9 154 aa16.7■□□□□ 0.26
RHBDF1-210ENST00000487201 HIGD1AQ9Y241 93 aa16.7■□□□□ 0.26
RHBDF1-210ENST00000487201 NBEAL2Q6ZNJ1 2754 aa16.7■□□□□ 0.26
RHBDF1-210ENST00000487201 RNF222A6NCQ9 220 aa16.7■□□□□ 0.26
RHBDF1-210ENST00000487201 OR5G3P0C626 314 aa16.7■□□□□ 0.26
RHBDF1-210ENST00000487201 FRMD6-AS1P0C7T7 363 aa16.7■□□□□ 0.26
RHBDF1-210ENST00000487201 ARV1Q9H2C2 271 aa16.7■□□□□ 0.26
RHBDF1-210ENST00000487201 TRAV2A0A0B4J234 112 aa16.69■□□□□ 0.26
RHBDF1-210ENST00000487201 K7EQG2 157 aa16.69■□□□□ 0.26
RHBDF1-210ENST00000487201 PAFAH1B2P68402 229 aa16.69■□□□□ 0.26
RHBDF1-210ENST00000487201 PXDC1Q5TGL8 231 aa16.69■□□□□ 0.26
RHBDF1-210ENST00000487201 C17orf77Q96MU5 243 aa16.69■□□□□ 0.26
RHBDF1-210ENST00000487201 SLC25A32Q9H2D1 315 aa16.69■□□□□ 0.26
RHBDF1-210ENST00000487201 SLC25A22Q9H936 323 aa16.69■□□□□ 0.26
RHBDF1-210ENST00000487201 TNFSF18Q9UNG2 199 aa16.69■□□□□ 0.26
RHBDF1-210ENST00000487201 TMA7Q9Y2S6 64 aaKnown RBP16.69■□□□□ 0.26
RHBDF1-210ENST00000487201 PXMP4Q9Y6I8 212 aa16.69■□□□□ 0.26
RHBDF1-210ENST00000487201 FXYD6-FXYD2A0A087WZ82 144 aa16.68■□□□□ 0.26
RHBDF1-210ENST00000487201 DNASE2O00115 360 aaPredicted RBP16.68■□□□□ 0.26
RHBDF1-210ENST00000487201 B2MP61769 119 aa16.68■□□□□ 0.26
RHBDF1-210ENST00000487201 OR8I2Q8N0Y5 310 aa16.68■□□□□ 0.26
RHBDF1-210ENST00000487201 B9D2Q9BPU9 175 aa16.68■□□□□ 0.26
RHBDF1-210ENST00000487201 FAM110AQ9BQ89 295 aa16.68■□□□□ 0.26
RHBDF1-210ENST00000487201 SLC39A9Q9NUM3 307 aa16.68■□□□□ 0.26
RHBDF1-210ENST00000487201 FBXL17Q9UF56 701 aa16.68■□□□□ 0.26
RHBDF1-210ENST00000487201 MORN5Q5VZ52 161 aa16.67■□□□□ 0.26
RHBDF1-210ENST00000487201 TENM3Q9P273 2699 aa16.67■□□□□ 0.26
RHBDF1-210ENST00000487201 MAP6D1Q9H9H5 199 aa16.67■□□□□ 0.26
RHBDF1-210ENST00000487201 NRN1Q9NPD7 142 aa16.67■□□□□ 0.26
RHBDF1-210ENST00000487201 ZNF124Q15973 351 aa16.66■□□□□ 0.26
RHBDF1-210ENST00000487201 LINC00322Q6ZN03 302 aaPredicted RBP16.66■□□□□ 0.26
RHBDF1-210ENST00000487201 Q6ZRG5 221 aa16.66■□□□□ 0.26
RHBDF1-210ENST00000487201 LINC00305Q7Z4B0 112 aa16.66■□□□□ 0.26
RHBDF1-210ENST00000487201 SRD5A3Q9H8P0 318 aa16.66■□□□□ 0.26
RHBDF1-210ENST00000487201 AGRNO00468 2067 aa16.66■□□□□ 0.26
RHBDF1-210ENST00000487201 ELOA3CA0A087WX78 387 aaPredicted RBP16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 RBMY1BA6NDE4 496 aaKnown RBP16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 RBMY1EA6NEQ0 496 aaKnown RBP16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 COX7A2P2O60397 106 aa16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 RBMY1DP0C7P1 496 aaKnown RBP16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 GCSAMLQ5JQS6 135 aa16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 APRG1Q8IVJ8 170 aa16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 RSG1Q9BU20 258 aa16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 DNAJC4Q9NNZ3 241 aa16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 C10orf113Q5VZT2 155 aa16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 INO80EQ8NBZ0 244 aaPredicted RBP16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 PARD6GQ9BYG4 376 aaPredicted RBP16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 TUBA4BQ9H853 241 aa16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 RFNGQ9Y644 331 aa16.65■□□□□ 0.26
RHBDF1-210ENST00000487201 SBSPONQ8IVN8 264 aa16.64■□□□□ 0.25
RHBDF1-210ENST00000487201 HUWE1Q7Z6Z7 4374 aaKnown RBP16.63■□□□□ 0.25
RHBDF1-210ENST00000487201 SOCS3O14543 225 aa16.63■□□□□ 0.25
RHBDF1-210ENST00000487201 S100A7P31151 101 aa16.63■□□□□ 0.25
RHBDF1-210ENST00000487201 MRPS12O15235 138 aaKnown RBP16.62■□□□□ 0.25
RHBDF1-210ENST00000487201 IFNA5P01569 189 aa16.62■□□□□ 0.25
RHBDF1-210ENST00000487201 ZNF688P0C7X2 276 aa16.62■□□□□ 0.25
RHBDF1-210ENST00000487201 KRBOX1C9JBD0 128 aa16.62■□□□□ 0.25
RHBDF1-210ENST00000487201 ARPC5O15511 151 aa16.62■□□□□ 0.25
RHBDF1-210ENST00000487201 GALR1P47211 349 aa16.62■□□□□ 0.25
RHBDF1-210ENST00000487201 DEFB131AP59861 70 aa16.62■□□□□ 0.25
RHBDF1-210ENST00000487201 OR1L4Q8NGR5 311 aa16.62■□□□□ 0.25
RHBDF1-210ENST00000487201 GPR82Q96P67 336 aa16.62■□□□□ 0.25
RHBDF1-210ENST00000487201 PFDN5Q99471 154 aa16.62■□□□□ 0.25
RHBDF1-210ENST00000487201 ASCL2Q99929 193 aa16.62■□□□□ 0.25
RHBDF1-210ENST00000487201 LOC105371267A0A1B0GV96 52 aa16.61■□□□□ 0.25
RHBDF1-210ENST00000487201 CXCL2P19875 107 aa16.61■□□□□ 0.25
RHBDF1-210ENST00000487201 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.61■□□□□ 0.25
RHBDF1-210ENST00000487201 ZNF709Q8N972 641 aa16.61■□□□□ 0.25
RHBDF1-210ENST00000487201 SCGB1C1Q8TD33 95 aa16.61■□□□□ 0.25
RHBDF1-210ENST00000487201 GATAD1Q8WUU5 269 aa16.61■□□□□ 0.25
RHBDF1-210ENST00000487201 TRAV5A0A0B4J249 113 aa16.6■□□□□ 0.25
RHBDF1-210ENST00000487201 RPL7P18124 248 aaKnown RBP16.6■□□□□ 0.25
RHBDF1-210ENST00000487201 CMC4P56277 68 aaPredicted RBP16.6■□□□□ 0.25
RHBDF1-210ENST00000487201 S100A7AQ86SG5 101 aa16.6■□□□□ 0.25
RHBDF1-210ENST00000487201 STAB2Q8WWQ8 2551 aa16.6■□□□□ 0.25
RHBDF1-210ENST00000487201 C17orf112F2Z3M2 114 aa16.59■□□□□ 0.25
RHBDF1-210ENST00000487201 SEPSECSQ9HD40 501 aaKnown RBP16.59■□□□□ 0.25
RHBDF1-210ENST00000487201 KCNIP2Q9NS61 270 aa16.59■□□□□ 0.25
RHBDF1-210ENST00000487201 ZNF266Q14584 549 aa16.59■□□□□ 0.25
RHBDF1-210ENST00000487201 HAGHQ16775 308 aa16.59■□□□□ 0.25
RHBDF1-210ENST00000487201 TMUB2Q71RG4 321 aa16.59■□□□□ 0.25
RHBDF1-210ENST00000487201 EIF4E3Q8N5X7 224 aaKnown RBP16.59■□□□□ 0.25
RHBDF1-210ENST00000487201 PSMG4Q5JS54 123 aa16.58■□□□□ 0.24
RHBDF1-210ENST00000487201 SLC51BQ86UW2 128 aa16.58■□□□□ 0.24
RHBDF1-210ENST00000487201 MFFQ9GZY8 342 aa16.58■□□□□ 0.24
RHBDF1-210ENST00000487201 A0A087X0K7 114 aa16.56■□□□□ 0.24
RHBDF1-210ENST00000487201 SNRPD3P62318 126 aaKnown RBP16.56■□□□□ 0.24
RHBDF1-210ENST00000487201 FFAR4Q5NUL3 377 aa16.56■□□□□ 0.24
RHBDF1-210ENST00000487201 SPATA31B1PQ5VZV4 182 aa16.56■□□□□ 0.24
RHBDF1-210ENST00000487201 RPL7L1Q6DKI1 246 aaKnown RBP16.56■□□□□ 0.24
RHBDF1-210ENST00000487201 HSD17B11Q8NBQ5 300 aa16.56■□□□□ 0.24
RHBDF1-210ENST00000487201 RNF24Q9Y225 148 aa16.56■□□□□ 0.24
RHBDF1-210ENST00000487201 ISLRO14498 428 aa16.56■□□□□ 0.24
RHBDF1-210ENST00000487201 SNRPCP09234 159 aaKnown RBP16.56■□□□□ 0.24
RHBDF1-210ENST00000487201 PSMB3P49720 205 aa16.56■□□□□ 0.24
RHBDF1-210ENST00000487201 MEOX2P50222 304 aa16.56■□□□□ 0.24
RHBDF1-210ENST00000487201 FAM78BQ5VT40 261 aa16.56■□□□□ 0.24
RHBDF1-210ENST00000487201 BPIFA4PQ86YQ2 179 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms