RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 C11orf52Q96A22 123 aa6.63□□□□□ -1.35
NUDCD3-209ENST00000487118 OR4F4Q96R69 305 aa6.63□□□□□ -1.35
NUDCD3-209ENST00000487118 RABAC1Q9UI14 185 aa6.63□□□□□ -1.35
NUDCD3-209ENST00000487118 RNF24Q9Y225 148 aa6.63□□□□□ -1.35
NUDCD3-209ENST00000487118 SVEP1Q4LDE5 3571 aa6.63□□□□□ -1.35
NUDCD3-209ENST00000487118 MXRA5Q9NR99 2828 aa6.63□□□□□ -1.35
NUDCD3-209ENST00000487118 CLPSL1A2RUU4 121 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 FAM181BA6NEQ2 426 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 GGTLC3B5MD39 225 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 PPP5D1E7EU14 171 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 SNAPINO95295 136 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 TRBV12-3P01733 135 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 IGLC2P0DOY2 106 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 HIST1H1EP10412 219 aaKnown RBP6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 NPPCP23582 126 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 ARL3P36405 182 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 MYCNOSP40205 109 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 HILS1P60008 231 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 FAM74A3Q4VXF1 159 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 LEMD1Q68G75 181 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 ATRAIDQ6UW56 229 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 C10orf99Q6UWK7 81 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 LCNL1Q6ZST4 164 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 OR4X2Q8NGF9 303 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 TMEM190Q8WZ59 177 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 NKX6-2Q9C056 277 aaPredicted RBP6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 GNB4Q9HAV0 340 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 U3KQE9 123 aa6.62□□□□□ -1.35
NUDCD3-209ENST00000487118 H3BQ15 152 aa6.61□□□□□ -1.35
NUDCD3-209ENST00000487118 NDUFA4O00483 81 aa6.61□□□□□ -1.35
NUDCD3-209ENST00000487118 IGHV3-11P01762 117 aa6.61□□□□□ -1.35
NUDCD3-209ENST00000487118 NBEAP1P0C6P0 100 aa6.61□□□□□ -1.35
NUDCD3-209ENST00000487118 BPIFA4PQ86YQ2 179 aa6.61□□□□□ -1.35
NUDCD3-209ENST00000487118 CLRN3Q8NCR9 226 aa6.61□□□□□ -1.35
NUDCD3-209ENST00000487118 WIPF2Q8TF74 440 aaPredicted RBP6.61□□□□□ -1.35
NUDCD3-209ENST00000487118 TCEAL7Q9BRU2 100 aa6.61□□□□□ -1.35
NUDCD3-209ENST00000487118 PARLQ9H300 379 aa6.61□□□□□ -1.35
NUDCD3-209ENST00000487118 C16orf95Q9H693 158 aa6.61□□□□□ -1.35
NUDCD3-209ENST00000487118 ZNF586Q9NXT0 402 aa6.61□□□□□ -1.35
NUDCD3-209ENST00000487118 PEF1Q9UBV8 284 aaKnown RBP6.61□□□□□ -1.35
NUDCD3-209ENST00000487118 ANK2Q01484 3957 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 IGHV3-35A0A0C4DH35 117 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 SCO2A0A1W2PP80 73 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 ZNF727A8MUV8 499 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 BUB3O43684 328 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 GGCTO75223 188 aaKnown RBP6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 RPLP1P05386 114 aaKnown RBP6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 LGALS1P09382 135 aaKnown RBP6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 RPL7P18124 248 aaKnown RBP6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 CRYBB3P26998 211 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 CEBPGP53567 150 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 C1orf194Q5T5A4 169 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 KLHDC1Q8N7A1 406 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 OR4F17Q8NGA8 305 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 RPUSD4Q96CM3 377 aaKnown RBP6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 TVP23CQ96ET8 276 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 UBE2E2Q96LR5 201 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 JMJD8Q96S16 334 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 SMIM7Q9BQ49 75 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 NIPSNAP3BQ9BS92 247 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 ELOVL1Q9BW60 279 aa6.6□□□□□ -1.35
NUDCD3-209ENST00000487118 TRBV19A0A075B6N1 114 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 A0A087X0K7 114 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 SCO1O75880 301 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 NDUFB4O95168 129 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 NDUFA7O95182 113 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 CRYBA1P05813 215 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 SUMO1P63165 101 aaKnown RBP6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 PNRC1Q12796 327 aaPredicted RBP6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 PDE6HQ13956 83 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 AWAT1Q58HT5 328 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 GPHB5Q86YW7 130 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 LYPD1Q8N2G4 141 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 C2CD4CQ8TF44 421 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 BLNKQ8WV28 456 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 GPR82Q96P67 336 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 METTL26Q96S19 204 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 SDF2L1Q9HCN8 221 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 OTORQ9NRC9 128 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 NAT8Q9UHE5 227 aa6.59□□□□□ -1.35
NUDCD3-209ENST00000487118 IGHV3OR16-8A0A075B7F1 116 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 C9JCJ5 164 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 K7EMT4 169 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 ZNF253O75346 499 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 CDX1P47902 265 aaPredicted RBP6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 RANP62826 216 aaKnown RBP6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 RHEBQ15382 184 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 TMEM241Q24JQ0 296 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 TCTEX1D4Q5JR98 221 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 C16orf54Q6UWD8 224 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 UNQ9165/PRO28630Q6UXU0 137 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 SIGLEC15Q6ZMC9 328 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 C5orf17Q8NAS9 161 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 WFDC12Q8WWY7 111 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 HIST1H2BAQ96A08 127 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 C17orf77Q96MU5 243 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 DERL1Q9BUN8 251 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 C20orf24Q9BUV8 137 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 Q9H3A6 140 aa6.58□□□□□ -1.36
NUDCD3-209ENST00000487118 SMAD5-AS1Q9Y6J3 95 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms