RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 C20orf173Q96LM9 149 aa13.73□□□□□ -0.21
CLIP2-206ENST00000487091 SLC25A39Q9BZJ4 359 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-206ENST00000487091 GSKIPQ9P0R6 139 aa13.73□□□□□ -0.21
CLIP2-206ENST00000487091 CELA1Q9UNI1 258 aa13.73□□□□□ -0.21
CLIP2-206ENST00000487091 TMEM189A5PLL7 270 aa13.72□□□□□ -0.21
CLIP2-206ENST00000487091 A8MTW9 85 aa13.72□□□□□ -0.21
CLIP2-206ENST00000487091 F6UB75 175 aa13.72□□□□□ -0.21
CLIP2-206ENST00000487091 K7EPK0 472 aa13.72□□□□□ -0.21
CLIP2-206ENST00000487091 TCRBP04435 133 aa13.72□□□□□ -0.21
CLIP2-206ENST00000487091 RRAS2P62070 204 aaPredicted RBP13.72□□□□□ -0.21
CLIP2-206ENST00000487091 S100A7AQ86SG5 101 aa13.72□□□□□ -0.21
CLIP2-206ENST00000487091 SHANK2-AS3Q9BTD1 123 aa13.72□□□□□ -0.21
CLIP2-206ENST00000487091 SCRT1Q9BWW7 348 aa13.72□□□□□ -0.21
CLIP2-206ENST00000487091 DOK5Q9P104 306 aa13.72□□□□□ -0.21
CLIP2-206ENST00000487091 MGAT4CQ9UBM8 478 aa13.72□□□□□ -0.21
CLIP2-206ENST00000487091 HIGD1AQ9Y241 93 aa13.72□□□□□ -0.21
CLIP2-206ENST00000487091 RCL1Q9Y2P8 373 aaKnown RBP13.72□□□□□ -0.21
CLIP2-206ENST00000487091 DEDDO75618 318 aa13.71□□□□□ -0.21
CLIP2-206ENST00000487091 MBPP02686 304 aaPredicted RBP13.71□□□□□ -0.21
CLIP2-206ENST00000487091 LINC00869P0C866 280 aa13.71□□□□□ -0.21
CLIP2-206ENST00000487091 RPL7P18124 248 aaKnown RBP13.71□□□□□ -0.21
CLIP2-206ENST00000487091 RNF126Q9BV68 326 aa13.71□□□□□ -0.21
CLIP2-206ENST00000487091 GGACTQ9BVM4 153 aa13.71□□□□□ -0.21
CLIP2-206ENST00000487091 SLC35B3Q9H1N7 401 aa13.71□□□□□ -0.21
CLIP2-206ENST00000487091 TEPPQ6URK8 271 aa13.7□□□□□ -0.22
CLIP2-206ENST00000487091 CCDC32Q9BV29 185 aa13.7□□□□□ -0.22
CLIP2-206ENST00000487091 RNF24Q9Y225 148 aa13.7□□□□□ -0.22
CLIP2-206ENST00000487091 GOLT1BQ9Y3E0 138 aa13.7□□□□□ -0.22
CLIP2-206ENST00000487091 RFNGQ9Y644 331 aa13.7□□□□□ -0.22
CLIP2-206ENST00000487091 IGHV4-4A0A075B6R2 117 aa13.69□□□□□ -0.22
CLIP2-206ENST00000487091 IGHV3OR16-12A0A075B7B8 117 aa13.69□□□□□ -0.22
CLIP2-206ENST00000487091 DEFB131BA0A096LNP1 70 aa13.69□□□□□ -0.22
CLIP2-206ENST00000487091 C7orf66A4D0T2 115 aa13.69□□□□□ -0.22
CLIP2-206ENST00000487091 OR5G3P0C626 314 aa13.69□□□□□ -0.22
CLIP2-206ENST00000487091 SPART-AS1P0CW21 52 aa13.69□□□□□ -0.22
CLIP2-206ENST00000487091 ZNF846Q147U1 533 aa13.69□□□□□ -0.22
CLIP2-206ENST00000487091 PXDC1Q5TGL8 231 aa13.69□□□□□ -0.22
CLIP2-206ENST00000487091 LINC00299Q6ZSB3 139 aa13.69□□□□□ -0.22
CLIP2-206ENST00000487091 ZNF431Q8TF32 576 aaPredicted RBP13.69□□□□□ -0.22
CLIP2-206ENST00000487091 TRAV6A0A075B6T7 132 aa13.68□□□□□ -0.22
CLIP2-206ENST00000487091 TRAV8-2A0A0B4J237 113 aa13.68□□□□□ -0.22
CLIP2-206ENST00000487091 DUSP14O95147 198 aaKnown RBP13.68□□□□□ -0.22
CLIP2-206ENST00000487091 PRR20EP86478 221 aa13.68□□□□□ -0.22
CLIP2-206ENST00000487091 PRR20CP86479 221 aa13.68□□□□□ -0.22
CLIP2-206ENST00000487091 PRR20DP86480 221 aa13.68□□□□□ -0.22
CLIP2-206ENST00000487091 PRR20BP86481 221 aa13.68□□□□□ -0.22
CLIP2-206ENST00000487091 PRR20AP86496 221 aa13.68□□□□□ -0.22
CLIP2-206ENST00000487091 ARL16Q0P5N6 197 aa13.68□□□□□ -0.22
CLIP2-206ENST00000487091 AMTNQ6UX39 209 aa13.68□□□□□ -0.22
CLIP2-206ENST00000487091 ZNF767PQ75MW2 155 aa13.68□□□□□ -0.22
CLIP2-206ENST00000487091 C1orf158Q8N1D5 194 aa13.68□□□□□ -0.22
CLIP2-206ENST00000487091 VPS13DQ5THJ4 4388 aa13.68□□□□□ -0.22
CLIP2-206ENST00000487091 A0A087X0K7 114 aa13.67□□□□□ -0.22
CLIP2-206ENST00000487091 L7N2F9 121 aa13.67□□□□□ -0.22
CLIP2-206ENST00000487091 CCSO14618 274 aa13.67□□□□□ -0.22
CLIP2-206ENST00000487091 AMBPP02760 352 aa13.67□□□□□ -0.22
CLIP2-206ENST00000487091 VAMP2P63027 116 aa13.67□□□□□ -0.22
CLIP2-206ENST00000487091 FGL1Q08830 312 aa13.67□□□□□ -0.22
CLIP2-206ENST00000487091 SLC38A11Q08AI6 406 aa13.67□□□□□ -0.22
CLIP2-206ENST00000487091 PATE2Q6UY27 113 aa13.67□□□□□ -0.22
CLIP2-206ENST00000487091 ZNF546Q86UE3 836 aa13.67□□□□□ -0.22
CLIP2-206ENST00000487091 UHRF2Q96PU4 802 aa13.67□□□□□ -0.22
CLIP2-206ENST00000487091 ARL6Q9H0F7 186 aa13.67□□□□□ -0.22
CLIP2-206ENST00000487091 NUDT15Q9NV35 164 aa13.67□□□□□ -0.22
CLIP2-206ENST00000487091 TEX48A0A1B0GUV7 120 aa13.66□□□□□ -0.22
CLIP2-206ENST00000487091 GOSR2O14653 212 aa13.66□□□□□ -0.22
CLIP2-206ENST00000487091 HBE1P02100 147 aa13.66□□□□□ -0.22
CLIP2-206ENST00000487091 CNN1P51911 297 aaKnown RBP13.66□□□□□ -0.22
CLIP2-206ENST00000487091 IGFL4Q6B9Z1 124 aa13.66□□□□□ -0.22
CLIP2-206ENST00000487091 C12orf45Q8N5I9 185 aaPredicted RBP13.66□□□□□ -0.22
CLIP2-206ENST00000487091 IGF2BP2-AS1Q96M15 143 aa13.66□□□□□ -0.22
CLIP2-206ENST00000487091 SEC22CQ9BRL7 303 aa13.66□□□□□ -0.22
CLIP2-206ENST00000487091 ARV1Q9H2C2 271 aa13.66□□□□□ -0.22
CLIP2-206ENST00000487091 C5orf51A6NDU8 294 aa13.65□□□□□ -0.22
CLIP2-206ENST00000487091 FAM25EA8MYX2 175 aa13.65□□□□□ -0.22
CLIP2-206ENST00000487091 AGPAT2O15120 278 aa13.65□□□□□ -0.22
CLIP2-206ENST00000487091 H2AFB2P0C5Z0 115 aa13.65□□□□□ -0.22
CLIP2-206ENST00000487091 EMP1P54849 157 aa13.65□□□□□ -0.22
CLIP2-206ENST00000487091 RNF182Q8N6D2 247 aa13.65□□□□□ -0.22
CLIP2-206ENST00000487091 C2orf50Q96LR7 162 aa13.65□□□□□ -0.22
CLIP2-206ENST00000487091 DKK2Q9UBU2 259 aa13.65□□□□□ -0.22
CLIP2-206ENST00000487091 RRN3P1Q2M238 152 aa13.64□□□□□ -0.23
CLIP2-206ENST00000487091 ZNF738Q8NE65 137 aa13.64□□□□□ -0.23
CLIP2-206ENST00000487091 OR11H7Q8NGC8 314 aa13.64□□□□□ -0.23
CLIP2-206ENST00000487091 LSM5Q9Y4Y9 91 aaKnown RBP13.64□□□□□ -0.23
CLIP2-206ENST00000487091 LOC102723971A0A1B0GUV8 181 aa13.63□□□□□ -0.23
CLIP2-206ENST00000487091 FAM240BA0A1B0GVZ2 78 aa13.63□□□□□ -0.23
CLIP2-206ENST00000487091 MRPS12O15235 138 aaKnown RBP13.63□□□□□ -0.23
CLIP2-206ENST00000487091 CXCL3P19876 107 aa13.63□□□□□ -0.23
CLIP2-206ENST00000487091 BCAP31P51572 246 aa13.63□□□□□ -0.23
CLIP2-206ENST00000487091 OXA1LQ15070 435 aa13.63□□□□□ -0.23
CLIP2-206ENST00000487091 FAM222AQ5U5X8 452 aa13.63□□□□□ -0.23
CLIP2-206ENST00000487091 S100ZQ8WXG8 99 aa13.63□□□□□ -0.23
CLIP2-206ENST00000487091 NIPSNAP3BQ9BS92 247 aa13.63□□□□□ -0.23
CLIP2-206ENST00000487091 NDUFAF3Q9BU61 184 aa13.63□□□□□ -0.23
CLIP2-206ENST00000487091 C11orf1Q9H5F2 150 aa13.63□□□□□ -0.23
CLIP2-206ENST00000487091 CRXO43186 299 aaPredicted RBP13.62□□□□□ -0.23
CLIP2-206ENST00000487091 CXCL2P19875 107 aa13.62□□□□□ -0.23
CLIP2-206ENST00000487091 PVALBP20472 110 aaPredicted RBP13.62□□□□□ -0.23
CLIP2-206ENST00000487091 B2MP61769 119 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms